- On carcinomas and other pathological entities.Barry Smith, Anand Kumar, Werner Ceusters & Cornelius Rosse - 2005 - Comparative and Functional Genomics 6 (7/8):379–387.details
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Anatomical information science.Barry Smith, Jose Mejino, Stefan Schulz, Anand Kumar & Cornelius Rosse - 2005 - In A. G. Cohn & D. M. Mark (eds.), Spatial Information Theory. Springer. pp. 149-164.details
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The Protein Ontology: A structured representation of protein forms and complexes.Darren Natale, Cecilia N. Arighi, Winona C. Barker, Judith A. Blake, Carol J. Bult, Michael Caudy, Harold J. Drabkin, Peter D’Eustachio, Alexei V. Evsikov, Hongzhan Huang, Jules Nchoutmboube, Natalia V. Roberts, Barry Smith, Jian Zhang & Cathy H. Wu - 2011 - Nucleic Acids Research 39 (1):D539-D545.details
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Ontology-based knowledge representation of experiment metadata in biological data mining.Scheuermann Richard, Kong Megan, Dahlke Carl, Cai Jennifer, Lee Jamie, Qian Yu, Squires Burke, Dunn Patrick, Wiser Jeff, Hagler Herb, Herb Hagler, Barry Smith & David Karp - 2009 - In Jake Chen & Stefano Lonardi (eds.), Biological Data Mining. Boca Raton: Chapman Hall / Taylor and Francis. pp. 529-559.details
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On the proper treatment of pathologies in biomedical ontologies.Barry Smith & Anand Kumar - 2005 - In Proceedings of the Bio-Ontologies Workshop, Intelligent Systems for Molecular Biology (ISMB 2005). Detroit: pp. 22-23.details
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Ontology based annotation of contextualized vital signs.Goldfain Albert, Xu Min, Bona Jonathan & Barry Smith - 2013 - In Proceedings of the Fourth International Conference on Biomedical Ontology (ICBO). Montreal: pp. 28-33.details
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What particulars are referred to in EHR data? A case study in integrating referent tracking into an electronic health record application.Ron Rudnicki, Werner Ceusters, Shaid Manzoo & Barry Smith - 2007 - In Proceedings of the Annual Symposium of the American Medical Informatics Association, Chicago, IL. Washington, DC: AMIA. pp. 630-634.details
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The Non-Coding RNA Ontology : a comprehensive resource for the unification of non-coding RNA biology.Huang Jingshan, Eilbeck Karen, Barry Smith, A. Blake Judith, Dou Dejing, Huang Weili, A. Natale Darren, Ruttenberg Alan, Huan Jun & T. Zimmermann Michael - 2016 - Journal of Biomedical Semantics 7 (1).details
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An evolutionary approach to the representation of adverse events.Werner Ceusters, Maria Capolupo, Barry Smith & Georges De Moor - 2009 - Studies in Health Technology and Informatics 150:537-541.details
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Biomedizinische Ontologien für die Praxis.M. Brochhausen & Barry Smith - 2009 - European Journal for Biomedical Informatics 1.details
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Clinical data wrangling using Ontological Realism and Referent Tracking.Werner Ceusters, Chiun Yu Hsu & Barry Smith - 2014 - In Proceedings of the Fifth International Conference on Biomedical Ontology (ICBO), Houston, 2014, (CEUR, 1327). pp. 27-32.details
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Guest Editorial: Ontologies for clinical and translational research.Barry Smith & Richard H. Scheuermann - 2011 - Journal of Biomedical Informatics 44 (1):3--7.details
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Six questions on the construction of ontologies in biomedicine.Anand Kumar, A. Burgun, W. Ceusters, J. Cimino, J. Davis, P. Elkin, I. Kalet, A. Rector, J. Rice, J. Rogers, Barry Smith & Others - 2005 - Report of the AMIA Working Group on Formal Biomedical Knowledge Representation 1.details
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Towards a Reference Terminology for Ontology Research and Development in the Biomedical Domain.Barry Smith, Waclaw Kusnierczyk, Daniel Schober, & Werner Ceusters - 2006 - In Proceedings of KR-MED, CEUR, vol. 222. pp. 57-65.details
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How to Distinguish Parthood from Location in Bioontologies.Stefan Schulz, Philipp Daumke, Barry Smith & Udo Hahn - 2005 - In Proceedings of the AMIA Symposium. American Medical Informatics Association. pp. 669-673.details
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Representing Dispositions.Johannes Röhl & Ludger Jansen - 2011 - Journal of Biomedical Semantics 2 (4).details
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Grains, Components and Mixtures in Biomedical Ontologies.Ludger Jansen & Schulz Stefan - 2011 - Journal of Biomedical Semantics 2 (4).details
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Four Rules for Classifying Social Entities.Ludger Jansen - forthcoming - In Ruth Hagengruber (ed.), Philosophy’s Relevance for Information Science.details
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CARO: The Common Anatomy Reference Ontology.Melissa Haendel, Fabian Neuhaus, David Osumi-Sutherland, Paula M. Mabee, José L. V. Mejino Jr, Chris J. Mungall & Barry Smith - 2008 - In Anatomy Ontologies for Bioinformatics: Principles and Practice. Springer. pp. 327-349.details
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Against idiosyncrasy in ontology development.Barry Smith - 2006 - In B. Bennett & C. Fellbaum (eds.), Formal Ontology in Information Systems (FOIS). Amsterdam: IOS Press. pp. 15-26.details
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Remarks on logic for process descriptions in ontological reasoning: A Drug Interaction Ontology case study.Mitsuhiro Okada, Barry Smith & Yutaro Sugimoto - 2008 - In InterOntology. Proceedings of the First Interdisciplinary Ontology Meeting, Tokyo, Japan, 26-27 February 2008. Tokyo: Keio University Press. pp. 127-138.details
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Toll-like receptor signaling in vertebrates: Testing the integration of protein, complex, and pathway data in the Protein Ontology framework.Cecilia Arighi, Veronica Shamovsky, Anna Maria Masci, Alan Ruttenberg, Barry Smith, Darren Natale, Cathy Wu & Peter D’Eustachio - 2015 - PLoS ONE 10 (4):e0122978.details
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A Spatio-Temporal Ontology for Geographic Information Integration.Thomas Bittner & Barry Smith - 2009 - International Journal for Geographical Information Science 23 (6):765-798.details
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Referent tracking for digital rights management.Werner Ceusters & Barry Smith - 2007 - International Journal of Metadata, Semantics and Ontologies 2 (1):45-53.details
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BFO-based ontology enhancement to promote interoperability in BIM.Justine Flore Tchouanguem, Mohamed Hedi Karray, Bernard Kamsu Foguem, Camille Magniont, F. Henry Abanda & Barry Smith - 2021 - Applied ontology 16 (4):1–27.details
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Foundations for a Realist Ontology of Mental Disease.Werner Ceusters & Barry Smith - 2010 - Journal of Biomedical Semantics 1 (10):1-23.details
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A survey of requirements for automated reasoning services for bio-ontologies in OWL.M. Scott Marshall, C. Maria Keet & Marco Roos - unknowndetails
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Functions, roles and dispositions revisited. A new classification of realizables.Johannes Röhl & Ludger Jansen - 2012 - In M. Boeker, H. Herre, R. Hoehndorf & F. Loebe (eds.), OBML 2012. Workshop Proceedings. Dresden, September 27-28.details
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Applications of the ACGT Master Ontology on Cancer.Mathias Brochhausen, Gabriele Weiler, Luis Martín, Cristian Cocos, Holger Stenzhorn, Norbert Graf, Martin Dörr, Manolis Tsiknakis & Barry Smith - 2008 - In R. Meersman & P. Herrero (eds.), Proceedings of 4th International IFIP Workshop On Semantic Web and Web Semantics (OTM 2008: Workshops), LNCS 5333. pp. 1046–1055.details
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Zellen in der Logik des Lebens.Niko Strobach - 2010 - Logos: Freie Zeitschrift für wissenschaftliche Philosophie 2:2-51.details
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Signs and Meanings.Barry Smith - 2009 - In Peer Bundgaard & Frederik Stjernfelt (eds.), Signs and Meanings: Five Questions. Automatic Press. pp. 199--206.details
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Referent Tracking: The Problem of Negative Findings.Werner Ceusters, Peter Elkin & Barry Smith - 2006 - Studies in Health Technology and Informatics 124:741-46.details
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Referent tracking for corporate memories.Werner Ceusters & Barry Smith - 2007 - In Peter Rittgen (ed.), Handbook of Ontologies for Business Interaction. Idea Group Publishing. pp. 34-46.details
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Negative findings in electronic health records and biomedical ontologies: a realist approach.Werner Ceusters, Peter Elkin & Barry Smith - 2007 - International Journal of Medical Informatics 76 (3):S326-S333.details
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Referent tracking and its applications.Werner Ceusters & Barry Smith - 2007 - In Proceedings of the Workshop WWW2007 Workshop i3: Identity, Identifiers, Identification (Workshop on Entity-Centric Approaches to Information and Knowledge Management on the Web), Banff, Canada. CEUR.details
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Strategies for Referent Tracking in Electronic Health Records.Werner Ceusters & Barry Smith - 2006 - Journal of Biomedical Informatics 39 (3):362-378.details
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Referent Tracking for Command and Control Messaging Systems.Shahid Manzoor, Werner Ceusters & Barry Smith - 2009 - CEUR, Volume 555.details
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Addressing Issues in Foundational Ontology Mediation.Zubeida Casmod Khan & C. Maria Keet - unknowndetails
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