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Thought Experiments in Biology

In Michael T. Stuart, Yiftach Fehige & James Robert Brown (eds.), The Routledge Companion to Thought Experiments. London: Routledge. pp. 243-256 (2018)

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  1. The Eighth Day of Creation: Makers of the Revolution in Biology.[author unknown] - 1980 - Journal of the History of Biology 13 (1):141-158.
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  • On the Origin of Species: By Means of Natural Selection, or the Preservation of Favoured Races in the Struggle for Life.Charles Darwin - 1859 - San Diego: Sterling. Edited by David Quammen.
    Familiarity with Charles Darwin's treatise on evolution is essential to every well-educated individual. One of the most important books ever published--and a continuing source of controversy, a century and a half later--this classic of science is reproduced in a facsimile of the critically acclaimed first edition.
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  • The descent of man, and selection in relation to sex.Charles Darwin - 1898 - New York: Plume. Edited by Carl Zimmer.
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  • A Function for Thought Experiments.T. Kuhn - 1981 - In David Zaret (ed.), Review of Thomas S. Kuhn The Essential Tension: Selected Studies in Scientific Tradition and Change. Duke University Press. pp. 240-265.
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  • The origin of species by means of natural selection.Charles Darwin - 1859 - Franklin Center, Pa.: Franklin Library. Edited by J. W. Burrow.
    ORIGIN OF SPECIES. INTRODUCTION. When on board HMS 'Beagle,' as naturalist, I was ranch struck with certain facts in the distribution of the organic beings ...
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  • On the Origin of Species by Means of Natural Selection.Charles Darwin - 1897 - New York: Heritage Press. Edited by George W. Davidson.
    ... Difficulty of distinguishing between Varieties and Species — Origin of Domestic ... and Origin— Principle of Selection anciently followed, its Effects— ...
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  • Synthesizing insight: Artificial life as thought experimentation in biology.Liz Stillwaggon Swan - 2009 - Biology and Philosophy 24 (5):687-701.
    What is artificial life? Much has been said about this interesting collection of efforts to artificially simulate and synthesize lifelike behavior and processes, yet we are far from having a robust philosophical understanding of just what Alifers are doing and why it ought to interest philosophers of science, and philosophers of biology in particular. In this paper, I first provide three introductory examples from the particular subset of artificial life I focus on, known as ‘soft Alife’ (s-Alife), and follow up (...)
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  • A Priori Causal Models of Natural Selection.Elliott Sober - 2011 - Australasian Journal of Philosophy 89 (4):571 - 589.
    To evaluate Hume's thesis that causal claims are always empirical, I consider three kinds of causal statement: ?e1 caused e2 ?, ?e1 promoted e2 ?, and ?e1 would promote e2 ?. Restricting my attention to cases in which ?e1 occurred? and ?e2 occurred? are both empirical, I argue that Hume was right about the first two, but wrong about the third. Standard causal models of natural selection that have this third form are a priori mathematical truths. Some are obvious, others (...)
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  • Fleeming Jenkin and The Origin of Species: a reassessment.Susan W. Morris - 1994 - British Journal for the History of Science 27 (3):313-343.
    Early in June of 1867, Charles Darwin turned back the cover of his copy of the respected quarterlyNorth British Review, to find on its opening pages a lengthy essay attacking his theory of natural selection. As with the vast majority of articles in the Victorian periodicals, the review was anonymous, prompting immediate speculation in Darwin's circle as to the author's identity. It was to be about a year-and-a-half before Darwin would learn that the engineer Fleeming Jenkin had written the essay. (...)
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  • Mental models and thought experiments.Nenad Miščević - 1992 - International Studies in the Philosophy of Science 6 (3):215-226.
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  • Can There be A Priori Causal Models of Natural Selection?Marc Lange & Alexander Rosenberg - 2011 - Australasian Journal of Philosophy 89 (4):591-599.
    Sober 2011 argues that, contrary to Hume, some causal statements can be known a priori to be true—notably, some ‘would promote’ statements figuring in causal models of natural selection. We find Sober's argument unconvincing. We regard the Humean thesis as denying that causal explanations contain any a priori knowable statements specifying certain features of events to be causally relevant. We argue that not every ‘would promote’ statement is genuinely causal, and we suggest that Sober has not shown that his examples (...)
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  • Vaulting Ambition.Philip Kitcher - 1988 - Noûs 22 (3):479-482.
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  • Abusing Science: The Case against Creationism.Michael Ruse - 1984 - Journal of the History of Biology 17 (1):147-148.
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  • Abusing Science: The Case against Creationism.Michael Ruse - 1984 - Philosophy of Science 51 (2):348-354.
    Several years ago, I was asked to participate in a forum on evolution. Flattered, I accepted, only discovering later that I was to participate in a “debate”, involving me and a scientist squaring off against two Creationists, Henry M. Morris and Duane T. Gish. The topic for discussion was which doctrine has the greatest scientific merit: organic evolution through natural processes set against the background of a very old earth, or special instantaneous appearance of all organisms, about 6000 years ago, (...)
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  • Darwin and His Critics: The Reception of Darwin's Theory of Evolution by the Scientific Community. David Hull.Michael Ruse - 1975 - Philosophy of Science 42 (3):338-339.
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  • Did Jenkin's swamping argument invalidate Darwin's theory of natural selection?Michael Bulmer - 2004 - British Journal for the History of Science 37 (3):281-297.
    Fleeming Jenkin's swamping argument is re-examined in relation to subsequent criticisms of its assumptions. Jenkin's original argument purported to show that, under blending inheritance, natural selection could not operate on ‘sports’ or ‘single variations’. A serious flaw in Jenkin's model was exposed in a forgotten paper in 1871. Darwin accepted Jenkin's ‘flawed’ conclusion, though he did not fully understand the argument. Both Jenkin and Darwin regarded the swamping argument as a barrier to evolution within a single lineage. A completely different (...)
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  • The Growth of Biological Thought: Diversity, Evolution, and Inheritance.Ernst Mayr - 1982 - Harvard University Press.
    Explores the development of the ideas of evolutionary biology, particularly as affected by the increasing understanding of genetics and of the chemical basis of inheritance.
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  • Simulation and Similarity: Using Models to Understand the World.Michael Weisberg - 2013 - New York, US: Oxford University Press.
    one takes to be the most salient, any pair could be judged more similar to each other than to the third. Goodman uses this second problem to showthat there can be no context-free similarity metric, either in the trivial case or in a scientifically ...
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  • Collected Papers of Charles Sanders Peirce: Pragmatism and pragmaticism and Scientific metaphysics.Charles Sanders Peirce - 1960 - Cambridge: Belknap Press.
    Charles Sanders Peirce has been characterized as the greatest American philosophic genius. He is the creator of pragmatism and one of the founders of modern logic. James, Royce, Schroder, and Dewey have acknowledged their great indebtedness to him. A laboratory scientist, he made notable contributions to geodesy, astronomy, psychology, induction, probability, and scientific method. He introduced into modern philosophy the doctrine of scholastic realism, developed the concepts of chance, continuity, and objective law, and showed the philosophical significance of the theory (...)
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  • The Laboratory of the Mind: Thought Experiments in the Natural Sciences.James Robert Brown - 1991 - New York: Routledge.
    Newton's bucket, Einstein's elevator, Schrödinger's cat – these are some of the best-known examples of thought experiments in the natural sciences. But what function do these experiments perform? Are they really experiments at all? Can they help us gain a greater understanding of the natural world? How is it possible that we can learn new things just by thinking? In this revised and updated new edition of his classic text _The Laboratory of the Mind_, James Robert Brown continues to defend (...)
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  • Computer Simulations in Science.Eric Winsberg - forthcoming - Stanford Encyclopedia of Philosophy.
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  • The Descent of Man.Charles Darwin - 1948 - Revista Portuguesa de Filosofia 4 (2):216-216.
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  • Darwin’s ‘imaginary illustrations’: creatively teaching evolutionary concepts and the nature of science.A. C. Love - 2010 - The American Biology Teacher 72:82–89.
    An overlooked feature of Darwin’s work is his use of “imaginary illustrations” to show that natural selection is competent to produce adaptive, evolutionary change. When set in the context of Darwin’s methodology, these thought.
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  • The Spandrels of San Marco and the Panglossian Paradigm: A Critique of the Adaptationist Programme.S. J. Gould & R. C. Lewontin - 1979 - In E. Sober (ed.), Conceptual Issues in Evolutionary Biology. The Mit Press. Bradford Books. pp. 73-90.
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  • Abusing Science--The Case against Creationism.Philip Kitcher - 1985 - British Journal for the Philosophy of Science 36 (1):85-89.
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  • Vaulting Ambition: Sociobiology and the Quest for Human Nature.Philip Kitcher - 1987 - Synthese 73 (2):399-405.
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  • 5 The arguments in the Origin of Species.C. Kenneth Waters - 2003 - In J. Hodges & Gregory Radick (eds.), The Cambridge Companion to Darwin. Cambridge University Press. pp. 116.
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  • In the Theoretician's Laboratory: Thought Experimenting as Mental Modeling.Nancy J. Nersessian - 1992 - PSA: Proceedings of the Biennial Meeting of the Philosophy of Science Association 1992:291 - 301.
    Thought experiments have played a prominent role in numerous cases of conceptual change in science. I propose that research in cognitive psychology into the role of mental modeling in narrative comprehension can illuminate how and why thought experiments work. In thought experimenting a scientist constructs and manipulates a mental simulation of the experimental situation. During this process, she makes use of inferencing mechanisms, existing representations, and general world knowledge to make realistic transformations from one possible physical state to the next. (...)
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  • Artificial Life as Philosophy.Daniel C. Dennett - unknown
    There are two likely paths for philosophers to follow in their encounters with Artificial Life: they can see it as a new way of doing philosophy, or simply as a new object worthy of philosophical attention using traditional methods. Is Artificial Life best seen as a new philosophical method or a new phenomenon? There is a case to be made for each alternative, but I urge philosophers to take the leap and consider the first to be the more important and (...)
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