Results for 'Ramona Lynn Walls'

44 found
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  1.  36
    The Plant Ontology Facilitates Comparisons of Plant Development Stages Across Species.Ramona Lynn Walls, Laurel Cooper, Justin Lee Elser, Maria Alejandra Gandolfo, Christopher J. Mungall, Barry Smith, Dennis William Stevenson & Pankaj Jaiswal - 2019 - Frontiers in Plant Science 10.
    The Plant Ontology (PO) is a community resource consisting of standardized terms, definitions, and logical relations describing plant structures and development stages, augmented by a large database of annotations from genomic and phenomic studies. This paper describes the structure of the ontology and the design principles we used in constructing PO terms for plant development stages. It also provides details of the methodology and rationale behind our revision and expansion of the PO to cover development stages for all plants, particularly (...)
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  2. The Plant Ontology as a Tool for Comparative Plant Anatomy and Genomic Analyses.Laurel Cooper, Ramona Walls, Justin Elser, Maria A. Gandolfo, Dennis W. Stevenson, Barry Smith & Others - 2013 - Plant and Cell Physiology 54 (2):1-23..
    The Plant Ontology (PO; http://www.plantontology.org/) is a publicly-available, collaborative effort to develop and maintain a controlled, structured vocabulary (“ontology”) of terms to describe plant anatomy, morphology and the stages of plant development. The goals of the PO are to link (annotate) gene expression and phenotype data to plant structures and stages of plant development, using the data model adopted by the Gene Ontology. From its original design covering only rice, maize and Arabidopsis, the scope of the PO has been expanded (...)
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  3. Ontologies as Integrative Tools for Plant Science.Ramona Walls, Balaji Athreya, Laurel Cooper, Justin Elser, Maria A. Gandolfo, Pankaj Jaiswal, Christopher J. Mungall, Justin Preece, Stefan Rensing, Barry Smith & Dennis W. Stevenson - 2012 - American Journal of Botany 99 (8):1263–1275.
    Bio-ontologies are essential tools for accessing and analyzing the rapidly growing pool of plant genomic and phenomic data. Ontologies provide structured vocabularies to support consistent aggregation of data and a semantic framework for automated analyses and reasoning. They are a key component of the Semantic Web. This paper provides background on what bio-ontologies are, why they are relevant to botany, and the principles of ontology development. It includes an overview of ontologies and related resources that are relevant to plant science, (...)
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  4.  94
    A Plant Disease Extension of the Infectious Disease Ontology.Ramona Walls, Barry Smith, Elser Justin, Goldfain Albert & W. Stevenson Dennis - 2012 - In Proceeedings of the Third International Conference on Biomedical Ontology (CEUR 897). pp. 1-5.
    Plants from a handful of species provide the primary source of food for all people, yet this source is vulnerable to multiple stressors, such as disease, drought, and nutrient deficiency. With rapid population growth and climate uncertainty, the need to produce crops that can tolerate or resist plant stressors is more crucial than ever. Traditional plant breeding methods may not be sufficient to overcome this challenge, and methods such as highOthroughput sequencing and automated scoring of phenotypes can provide significant new (...)
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  5.  52
    Semantics in Support of Biodiversity: An Introduction to the Biological Collections Ontology and Related Ontologies.Ramona L. Walls, John Deck, Robert Guralnik, Steve Baskauf, Reed Beaman, Stanley Blum, Shawn Bowers, Pier Luigi Buttigieg, Neil Davies, Dag Endresen, Maria Alejandra Gandolfo, Robert Hanner, Alyssa Janning, Barry Smith & Others - 2014 - PLoS ONE 9 (3):1-13.
    The study of biodiversity spans many disciplines and includes data pertaining to species distributions and abundances, genetic sequences, trait measurements, and ecological niches, complemented by information on collection and measurement protocols. A review of the current landscape of metadata standards and ontologies in biodiversity science suggests that existing standards such as the Darwin Core terminology are inadequate for describing biodiversity data in a semantically meaningful and computationally useful way. Existing ontologies, such as the Gene Ontology and others in the Open (...)
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  6. Hume on Divine Amorality.Jerry L. Walls - 1990 - Religious Studies 26 (2):257 - 266.
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  7. An Analysis of the Relationship Between Foreign Trade and Economic Growth in Myanmar During 1990-2014.Kyaw Kyaw Lynn - 2014 - International Journal of Business and Administrative Studies 1 (4):114-131.
    This study analyzes the relationship between foreign trade and economic growth in Myanmar over the period 1990-2014. It covers the annual data of GDP, Export and Import of Myanmar from 1980 to 2014. This study adopts two major methodological approaches – exploratory data analysis and descriptive analysis. For the first approach, Augmented Dickey-Fuller (ADF) unit root test and Granger causality test are used under the framework of Vector Autoregressive (VAR) model, which have almost never been studied for the Myanmar case. (...)
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  8. Kenneth J. Collins and Jerry L. Walls. Roman but Not Catholic: What Remains at Stake 500 Years After the Reformation. [REVIEW]Logan Paul Gage - 2019 - Journal of Analytic Theology 7 (1):732-736.
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  9.  59
    In Spirit and Truth: Toward a Theology Without Walls.Richard Oxenberg - manuscript
    Theology Without Walls is a project that seeks to understand the nature of divine reality through an exploration of all the world's religious traditions, without confining itself to any one in particular. In this essay, I discuss why theology has traditionally been done within the boundaries of specific traditions and suggest that, in our time, we are called to a new, more comprehensive, approach to theology.
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  10.  47
    The Plant Ontology: A Common Reference Ontology for Plants.L. Walls Ramona, D. Cooper Laurel, Elser Justin, W. Stevenson Dennis, Barry Smith, Mungall Chris, A. Gandolfo Maria & Jaiswal Pankaj - 2010 - In Proceedings of the Workshop on Bio-Ontologies, ISMB, Boston, July, 2010.
    The Plant Ontology (PO) (http://www.plantontology.org) (Jaiswal et al., 2005; Avraham et al., 2008) was designed to facilitate cross-database querying and to foster consistent use of plant-specific terminology in annotation. As new data are generated from the ever-expanding list of plant genome projects, the need for a consistent, cross-taxon vocabulary has grown. To meet this need, the PO is being expanded to represent all plants. This is the first ontology designed to encompass anatomical structures as well as growth and developmental stages (...)
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  11.  46
    Theology Without Walls: A New Mode of Spiritual Engagement.Richard Oxenberg - manuscript
    Theology Without Walls - or 'trans-religious theology' - is a theological approach dedicated to reflecting upon the nature of divine reality as it may be revealed in any of the world’s religious traditions, without confining itself to any one in particular. In this paper I discuss some of the basic assumptions and implications of the Theology Without Walls project and suggest that this approach to theology, and to religion in general, promises to help resolve antagonisms and divisions that (...)
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  12. The Need for Walls: Privacy, Community and Freedom in the Dispossessed.Mark Tunick - 2005 - In Laurence Davis & Peter Stillman (eds.), The New Utopian Politics of Ursula K. Le Guin's the Dispossessed. Lanham, MD 20706, USA: pp. 129-48.
    The Dispossessed has been described by political thinker Andre Gorz as 'The most striking description I know of the seductions—and snares—of self-managed communist or, in other words, anarchist society.' To date, however, the radical social, cultural, and political ramifications of Le Guin's multiple award-winning novel remain woefully under explored. Editors Laurence Davis and Peter Stillman right this state of affairs in the first ever collection of original essays devoted to Le Guin's novel. Among the topics covered in this wide-ranging, international (...)
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  13.  28
    Review of "Heaven, Hell, and Purgatory" by Jerry L. Walls[REVIEW]Lloyd Strickland - 2016 - Reading Religion 1.
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  14.  48
    Experiential Learning in Philosophy, by Julinna Oxley and Ramona Ilea (Eds.). [REVIEW]Debra Jackson - 2016 - Teaching Philosophy 39 (3):372-376.
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  15. Jerry L. Walls. Purgatory: The Logic of Total Transformation. Oxford University Press, 2012.Joshua Farris - 2014 - European Journal for Philosophy of Religion 6 (1):215--220.
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  16. “From Museum Walls to Facebook Walls”*. A New Public Space for Art.Gizela Horvath - 2014 - In Gizela Horvath, Rozalia Klara Bako & Eva Biro Kaszas (eds.), Ten Years of Facebook. Proceedings of the Third International Conference on Argumentation and Rhetoric. Partium Kiado. pp. 73-88.
    The ‘museal’ approach to art has been attacked from many angles in the last decade; the main issue raised by most of these attacks was that such an approach would promote a certain idea of art which has little to do with real-life or the layman’s interest. Some artists have protested by stepping out of the museum space with projects deliberately designed as non-museum items (performance, land-art, public art etc.). Art, however, is always meant for a public, so, as an (...)
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  17. Review of Interdisciplining Digital Humanities: Boundary Work in an Emerging Field. [REVIEW]Subhasis Chattopadhyay - 2016 - Prabuddha Bharata or Awakened India 121 (7 (July)):577-8.
    This review makes a case for scholars putting up their works online and for removing pay-walls of any kind. Therefore, this review is in sync with the stated aims of philpapers.org.
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  18.  21
    El mecanismo evolutivo de Margulis y los niveles de selección.Javier Suárez - 2016 - Contrastes: Revista Internacional de Filosofía 1 (20):7-26.
    Margulis’ evolutionary theory entails a revision of certain core concepts of traditional biology. One of these changes is related to the hot debate about units of selection. This paper considers Margulis’ proposal as a new research tradition (RT) and evaluates its consequences to the mentioned issue. Three ideas are suggested here: firstly, that her theory represents the revision of many classical biological concepts; secondly, that her position implies a reappraisal of many traditional issues in philosophy of biology; and thirdly, that (...)
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  19.  42
    Open Borders Without Open Access (Conference Version July 2019).Dan Demetriou - manuscript
    What are libertarian open borders advocates even advocating for? Is it, as the title to Michael Huemer’s influential essay suggests, a prima facie “right to immigrate”? Or is it, as the branding connotes, literal open borders, or a strong prima facie moral right to free movement across borders that entails a right to immigrate? In this paper, I peel apart the view that people have a strong moral right to freely cross international borders, or "open access," from the view that (...)
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  20.  66
    The Simplicity of Divine Ideas: Theistic Conceptual Realism and The Doctrine of Divine Simplicity.Michelle Lynn Panchuk - forthcoming - Religious Studies.
    There has been little discussion of the compatibility of Theistic Conceptual Realism (TCR) with the doctrine of divine simplicity (DDS). On one hand, if a plurality of universals is necessary to explain the character of particular things, there is reason to think this commits the proponent of TCR to the existence of a plurality of divine concepts. So the proponent of the DDS has a prima facie reason to reject TCR (and vice versa). On the other hand, many mediaeval philosophers (...)
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  21.  41
    De-Bordering Justice in the Age of International Migrations: An Introduction.Juan Carlos Velasco & MariaCaterina La Barbera - 2019 - In Juan Carlos Velasco & MariaCaterina La Barbera (eds.), Challenging the Borders of Justice in the Age of Migrations. Cham: Springer Verlag. pp. 1-13.
    This chapter introduces and discusses the concepts that are in-depth articulated in the volume. International migration is presented here as a test bench where the normative limits of institutional order, its contradictions and internal tensions are examined. Migrations allows to call into question classical political categories and models. Pointing at walls and fences as tools that reproduce enormous inequalities within the globalized neo-liberal system, this chapter presents the conceptual tensions and contradictions between migration policies and global justice. We challenge (...)
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  22.  38
    Healing the Scars of History: Borders, Migration, and the Reproduction of Structural Injustice.Juan Carlos Velasco - 2019 - In Juan Carlos Velasco & MariaCaterina La Barbera (eds.), Challenging the Borders of Justice in the Age of Migrations. Springer Verlag.
    The suppression of trade barriers and liberalization of financial flows inherent to the expansive dynamic of globalization have not extended to international flows of workers. To impede the free movement of workers, restrictive migratory policies have been implemented, and borders have been fortified with walls and fences. In the face of this widespread phenomenon, this chapter presents an alternative consisting of three steps. First, it is noted that in the current migratory context, borders play a key role in reproducing (...)
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  23. On the Militarization of Borders and the Juridical Right to Exclude.Grant J. Silva - 2015 - Public Affairs Quarterly 29 (2):217-234.
    This work explores the increasing militarization of borders throughout the world, particularly the United States border with Mexico. Rather than further rhetoric of "border security," this work views increases in guards, technology and the building of walls as militarized action. The goal of this essay is to place the onus upon states to justify their actions at borders in ways that do not appeal to tropes of terrorism. This work then explores how a logic of security infiltrates philosophical discussions (...)
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  24. The Self-Poetizing Earth: Heidegger, Santiago Theory, and Gaia Theory.Henry Dicks - 2011 - Environmental Philosophy 8 (1):41-61.
    Although Heidegger thinks cybernetics is the “supreme danger,” he also thinks that it harbours within itself poiēsis, the “saving power.” This article providesa justification of this position through an analysis of its relation to Humberto Maturana and Francisco Varela’s Santiago theory of cognition and James Lovelock and Lynn Margulis’ Gaia theory. More specifically, it argues that Maturana and Varela’s criticism of cybernetics and their concomitant theory of “autopoiesis” constitutes the philosophical disclosure of “Being itself,” and that the extension of (...)
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  25. Changing the Rules: Architecture and the New Millennium.David Kirsh - 2001 - Convergence 7 (2):113-125.
    Architecture is about to enter its first magical phase: a time when buildings actively co-operate with their inhabitants; when objects know what they are, where they are, what is near them; when social and physical space lose their type coupling; when wall and partitions change with mood and task. As engineers and scientists explore how to digitse the world around us, the classical constraints of design, ruled so long by the physics of space, time, and materials, are starting to crumble. (...)
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  26. Homelessness, Restlessness and Diasporic Poetry.Arie Kizel - 2010 - Policy Futures in Education 8 (3-4): 467–477.
    Can poetry be Diasporic? Can poetry free itself from the shackles of conformism? Can it be independent and divergent, and not seek a home? Is it capable of mustering its inner strengths and living without being enlisted by a collective that accords it power? This article argues that poetry is essentially dialectic. It has little vitality without the presence of the Other, without interaction with him. However, it also contains independent, personal elements and reaches its peak through the individual’s anti-conformist (...)
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  27. Islamic Environmental Ethics and the Challenge of Anthropocentrism.Ali Rizvi - 2010 - AMERICAN JOURNAL OF ISLAMIC SOCIAL SCIENCES 27 (3):53-78.
    Lynn White’s seminal article on the historical roots of the ecological crisis, which inspired radical environmentalism, has cast suspicion upon religion as the source of modern anthropocentrism. To pave the way for a viable Islamic environmental ethics, charges of anthropocentrism need to be faced and rebutted. Therefore, the bulk of this paper will seek to establish the non- anthropocentric credentials of Islamic thought. Islam rejects all forms of anthropocentrism by insisting upon a transcendent God who is utterly unlike His (...)
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  28. Brentano and Aesthetic Intentions.Lynn Pasquerella - 1993 - Brentano Studien 4:235-249.
    Brentano's philosophy of art, contained primarily in his book, Grundzuge der Ästhetik, is the result of an original theory of intrinsic value that was derived from Brentano's philosophical psychology. In his aesthetics, Brentano endeavored to find an objective ground for the value of aesthetic contemplation through his theory of the intentional objects of emotions and desires. The lack of attention Brentano's aesthetics has received is surprising, given that two of the many students Brentano influenced, Husserl (through the development of the (...)
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  29. Levinas's Empiricism and James's Phenomenology.Randy L. Friedman - 2012 - Journal of Scriptural Reasoning 11 (2).
    Genealogies in philosophy can be tricky and even a little dangerous. Lines of influence and inheritance run much more linearly on paper than in reality. I am often reminded of Robert Frost's "Mending Walls" and the attention that must be paid to what is being walled in and what is being walled out. In other words, William James and Emmanuel Levinas are not natural conversation partners. I have always read James as a fellow traveler of Edmund Husserl, and placed (...)
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  30. Experimental Philosophy, Clinical Intentions, and Evaluative Judgment.Lynn A. Jansen, Jessica S. Fogel & Mark Brubaker - 2013 - Cambridge Quarterly of Healthcare Ethics 22 (2):126-135.
    Recent empirical work on the concept of intentionality suggests that people’s assessments of whether an action is intentional are subject to uncertainty. Some researchers have gone so far as to claim that different people employ different concepts of intentional action. These possibilities have motivated a good deal of work in the relatively new field of experimental philosophy. The findings from this empirical research may prove to be relevant to medical ethics. -/- In this article, we address this issue head on. (...)
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  31.  45
    Protective Microbiota: From Localized to Long-Reaching Co-Immunity.Lynn Chiu, Thomas Bazin, Marie-Elise Truchetet, Thierry Schaeverbeke, Laurence Delhaes & Thomas Pradeu - 2017 - Frontiers Immunology 8:1678.
    Resident microbiota do not just shape host immunity, they can also contribute to host protection against pathogens and infectious diseases. Previous reviews of the protective roles of the microbiota have focused exclusively on colonization resistance localized within a microenvironment. This review shows that the protection against pathogens also involves the mitigation of pathogenic impact without eliminating the pathogens (i.e., “disease tolerance”) and the containment of microorganisms to prevent pathogenic spread. Protective microorganisms can have an impact beyond their niche, interfering with (...)
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  32. Counting the Cost of Global Warming.John Broome - 1992 - Strond: White Horse Press.
    Since the last ice age, when ice enveloped most of the northern continents, the earth has warmed by about five degrees. Within a century, it is likely to warm by another four or five. This revolution in our climate will have immense and mostly harmful effects on the lives of people not yet born. We are inflicting this harm on our descendants by dumping greenhouse gases into the atmosphere. We can mitigate the harm a little by taking measures to control (...)
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  33.  30
    1,000 Holes in the Wall.Gavin Keeney - manuscript
    Co-authored research paper written with José Vela Castillo on the subject of Pablo Román's wall of 1,000 images, Vienna, 2013. -/- “Vienna” or “The Wall” is an ongoing project by architect/artist Pablo Román that, upon its completion, will consist of the round number of 1,000 images taped onto an off-white wall. One of the many walls he has designed/produced in the past months (architectural or otherwise), its elementary condition is at the same time enhanced and diminished by its very (...)
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  34.  66
    The Rights of "Unborn Children" and the Value of Pregnant Women.Howard L. Minkoff & Lynn M. Paltrow - 2006 - Hastings Center Report 36 (2):26-28.
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  35. Globalistics and Globalization Studies: Global Transformations and Global Future.Leonid Grinin, Ilya Illin, Andrey Korotayev & Peter Herrmann - 2016 - Volgograd, Russia: Uchitel Publishing House.
    The present volume is the fifth in the series of yearbooks with the title Globalistics and Globalization Studies. The subtitle of the present volume is Global Transformations and Global Future. We become more and more accustomed to think globally and to see global processes. And our future can all means be global. However, is this statement justified? Indeed, in recent years, many have begun to claim that globalization has stalled, that we are rather dealing with the process of anti-globalization. Will (...)
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  36.  56
    Wittgenstein And Labyrinth Of ‘Actual Infinity’: The Critique Of Transfinite Set Theory.Valérie Lynn Therrien - 2012 - Ithaque 10:43-65.
    In order to explain Wittgenstein’s account of the reality of completed infinity in mathematics, a brief overview of Cantor’s initial injection of the idea into set- theory, its trajectory and the philosophic implications he attributed to it will be presented. Subsequently, we will first expound Wittgenstein’s grammatical critique of the use of the term ‘infinity’ in common parlance and its conversion into a notion of an actually existing infinite ‘set’. Secondly, we will delve into Wittgenstein’s technical critique of the concept (...)
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  37. INVENTING LOGIC: THE LÖWENHEIM-SKOLEM THEOREM AND FIRST- AND SECOND-ORDER LOGIC.Valérie Lynn Therrien - 2012 - Pensées Canadiennes 10.
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  38.  29
    A Critical Analysis of Philosophical Foundation of Human Rights.Amit Singh - manuscript
    Human rights are grand political philosophy of the modern times, thus no wonder as a language of progressive politics which once was discourse of social emancipation (Boaventura Santos, 2002), has transcended national boundaries to become aspiration of humankind (Samul Moyn (2010), and is a commonly shared bulwark against evil (Lynn Hunt, 2007). Centred upon moral belief propelled on metaphysical moral assumption with its origin in Christianity pity and Enlightment discourse, however, human rights have become a sort of moral imperialism (...)
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  39.  97
    Przyczynowość stanów mentalnych w modelach naukowych. Próba alternatywnego uzasadnienia antynaturalizmu eksplanacyjnego Urszuli Żegleń.Kawalec Pawel - 2010 - In Muszyński Zbysław (ed.), Umysł. Natura i sposób istnienia. Wydawnictwo UMCS. pp. 45-57.
    An antinaturalist defense of causality of mental states. The argument is based on the properties of causal models in cognitive research. Bibliografia prac przywołanych w tekście -/- Damasio A., 1994/1999, Błąd Kartezjusza. Emocje, rozum i ludzki mózg, tłum. M. Karpiński, Poznań: Rebis. Davidson D., 1963/2001, „Actions, reasons, and causes”, w: (Davidson 2001), s. 3-19. Davidson D., 1967/2001, „Causal relations”, w: (Davidson 2001), s. 149-62. Davidson D., 1970/2001, „Mental events”, w: (Davidson 2001), s. 207-25. Davidson D., 1976/2001, „Hempel on explaining action”, (...)
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  40.  10
    Contesting Knowledge, Contested Space: Language, Place, and Power in Derek Walcott’s Colonial Schoolhouse.Ben Jefferson - 2014 - Teorie Vědy / Theory of Science 36 (1):77-103.
    Derek Walcott's colonial schoolhouse bears an interesting relationship to space and place: it is both a Caribbean site, and a site that disavows its locality by valorizing the metropolis and acting as a vital institution in the psychic colonization of the Caribbean peoples. The situation of the schoolhouse within the Caribbean landscape, and the presence of the Caribbean body, means that the pedagogical relationship works in two ways, and that the hegemonic/colonial discourses of the schoolhouse are inherently challenged within its (...)
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  41.  83
    Florovsky’s 'The Boundaries of the Church' in Dialogue with the Reformed Tradition: Toward a Catholic and Charismatic Ecumenical Ecclesiology.Steven Aguzzi - 2010 - Ecumenical Trends 39 (3).
    The purpose of this essay is threefold. First, I seek to trace a brief history of the concept of catholicity within the Reformed tradition and offer this historical context as an explanation for its resistance to traditional conceptions of the Church. Second, I will show how Georges Florovsky’s work “The Boundaries of the Church,” offers a better point of reference for Orthodox dialogue with Churches of the Reformed Tradition than other Orthodox ecclesiologies, such as those based solely on St. Cyprian’s (...)
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  42.  5
    Historie neurogeneze: implicitní definice a pragmatická falsifikace.Marek Havlík - 2013 - Teorie Vědy / Theory of Science 35 (3):353-379.
    Tato studie se snaží o filosofickou analýzu problematických aspektů neurogeneze. V první řadě se zaměřuje na moderní historii neurogeneze, která je obecně považována za historii dogmatického přesvědčení, které předpokládalo, že v mozku dospělého savce nemohou vzniknout nové neurony. Tato konvence přežívala v neurovědě po několik desítek let a její kořeny sahají až do dob Ramóna y Cajala. Důležitá část této filosofické analýzy se zaměřuje na aspekt tzv. zaštiťování dogmatu pomocí ad hoc hypotéz. Analýza se dále věnuje implicitním definicím, které hrají (...)
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  43.  13
    Lessing Herder e la Massoneria del XXI Secolo.Francesco Angioni (ed.) - 2018 - MIlano, IT:
    It is always difficult to disentangle oneself from the changes in epoch-making cultural events that have taken place over several centuries. Freemasonry is an emblematic case. It was born around the seventeenth century and still exists in the twenty-first. The changes within it have been innumerable, showing that it is not a coherent and constant phenomenon in its evolution. There have been Masonic authors, of relevant presence in Western culture, who have nailed the fundamental principles of Masonic thought, of its (...)
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  44.  98
    This Talk is the Exhibition.Allen Alain Viguier (ed.) - 2016
    "Catalogue" of the exhibition This talk is the exhibition held at Articulate Upstairs in Sydney, 12-20 March 2016. Print on paper 14 x 14 cm. Published by Spec&Editions Collection of the Artist. The exhibition reproduces the catalogue in a suite of larger prints pasted on the walls, with a few additions to it.
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