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  1. One thousand and one ways of making functionally similar transcriptional enhancers.Reiner A. Veitia - 2008 - Bioessays 30 (11-12):1052-1057.
    Expression of most genes is regulated by the interaction of multiple transcription factors with cis‐regulatory sequences. Many studies have focused on how changes in promoters and enhancers alter gene expression and phenotype. Recently, Hare et al., using elegant wet and computational approaches uncovered a series of enhancers driving the expression of the even‐skipped gene in scavenger flies (Sepsidae).1 Despite the strong sequence divergence between the enhancers in sepsids and drosophilids, they lead to remarkably similar patterns of gene expression in transgenic (...)
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  • The Work Surfaces of Morphogenesis: The Role of the Morphogenetic Field.Sheena E. B. Tyler - 2014 - Biological Theory 9 (2):194-208.
    How biological form is generated remains one of the most fascinating but elusive challenges for science. Moreover, it is widely documented in contemporary literature that development is tightly coordinated. The idea that such development is governed by a coordinating field of force, the morphogenetic field, and its position in embryology research paradigms, is traced in this article. Empirical evidences for field phenomena are described, ranging from bioelectromagnetic effects, morphology, transplantation, regeneration, and other data. Applications of medical potential including treatment of (...)
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  • Stripe formation in the early fly embryo: principles, models, and networks.Dmitri Papatsenko - 2009 - Bioessays 31 (11):1172-1180.
    Early development of animal embryos begins from spatially distributed products of gene expression, i.e., gradients. While maternal and early zygotic genes form broad and/or terminal gradients, their direct targets appear later on as relatively narrow stripes, which foreshadow presumptive germ layers or future segments. Evidently, stripe expression of the zygotic genes is among the key mechanisms of embryo patterning. In this paper, known qualitative and quantitative models for the stripe formation are considered on the example of early embryogenesis of Drosophila. (...)
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  • Invención y explicación: la comprensión científica en biología.Juan Ramón Álvarez - 2017 - Scientiae Studia 15 (2):221.
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  • The Objectivity of Organizational Functions.Samuel Cusimano & Beckett Sterner - 2020 - Acta Biotheoretica 68 (2):253-269.
    We critique the organizational account of biological functions by showing how its basis in the closure of constraints fails to be objective. While the account treats constraints as objective features of physical systems, the number and relationship of potential constraints are subject to potentially arbitrary redescription by investigators. For example, we show that self-maintaining systems such as candle flames can realize closure on a more thorough analysis of the case, contradicting the claim that these “simple” systems lack functional organization. This (...)
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  • Hydra Regeneration: Closing the Loop with Mechanical Processes in Morphogenesis.Erez Braun & Kinneret Keren - 2018 - Bioessays 40 (7):1700204.
    The convergence of morphogenesis into viable organisms under variable conditions suggests closed‐loop dynamics involving multiscale functional feedback. We develop the idea that morphogenesis is based on synergy between mechanical and bio‐signaling processes, spanning all levels of organization: molecular, cellular, tissue, up to the whole organism. This synergy provides feedback within and between all levels of organization, to close the loop between the dynamics of the morphogenesis process and its robust functional outcome. Hydra offer a powerful platform to explore this direction, (...)
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