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  1. Rational Disagreements in Phylogenetics.Fabrizzio Guerrero Mc Manus - 2009 - Acta Biotheoretica 57 (1-2):99-127.
    This paper addresses the general problem of how to rationally choose an algorithm for phylogenetic inference. Specifically, the controversy between maximum likelihood (ML) and maximum parsimony (MP) perspectives is reframed within the philosophical issue of theory choice. A Kuhnian approach in which rationality is bounded and value-laden is offered and construed through the notion of a Style of Modeling. A Style is divided into four stages: collecting remnant models, constructing models of taxonomical identity, implementing modeling algorithms, and finally inferring and (...)
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  • Parts and theories in compositional biology.Rasmus Grønfeldt Winther - 2006 - Biology and Philosophy 21 (4):471-499.
    I analyze the importance of parts in the style of biological theorizing that I call compositional biology. I do this by investigating various aspects, including partitioning frames and explanatory accounts, of the theoretical perspectives that fall under and are guided by compositional biology. I ground this general examination in a comparative analysis of three different disciplines with their associated compositional theoretical perspectives: comparative morphology, functional morphology, and developmental biology. I glean data for this analysis from canonical textbooks and defend the (...)
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  • Invención y explicación: la comprensión científica en biología.Juan Ramón Álvarez - 2017 - Scientiae Studia 15 (2):221.
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  • Grounding the big picture.Patrick Forber - 2005 - Biology and Philosophy 20 (4):913-923.
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