Abstract
While vitally critical, the relationship between conscious system and the central nervous system (CNS) is least interested to the scientific community, and often regarded as abstractly conceptual in philosophy or religion. We argue that the existence of consciousness system is parallel to, and independent of, CNS. First and foremost, all sciences are based on logic, not any existing theories, so does neuroscience. So, neuroscience shall start from some theory-independent logic, not some neural or molecular hypotheses, or count on modern physics which is neither completed nor physically deep enough. It shall hypothesize the brain has a CNS (central nervous system) independent consciousness system. Then, we have explained why this hypothesis is theory-independent from the view of methodology, philosophy and physics; what a strong experimental logic this hypothesis can produce; how the logic can measure consciousness. In short, sciences are based on logic, and it is serious for neuroscience to hypothesize there is a CNS-independent consciousness system.