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  1. Punctuated Equilibria: An Alternative to Phyletic Gradualism.Niles Eldredge & Stephen Jay Gould - 1972 - In Thomas J. M. Schopf (ed.), Models in Paleobiology. Freeman Cooper. pp. 82-115.
    They are correct that punctuated equilibria apply to sexually reproducing organisms and that morphological evolutionary change is regarded as largely (if not exclusively) correlated with speciation events. However, they err in suggesting that we attribute stasis strictly to "developmental constraints," which represent only one of a set of possible mechanisms that we have suggested for the causes of stasis. Others include habitat tracking and the internal structure of species themselves [for example, (2)].
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  • Making Prehistory: Historical Science and the Scientific Realism Debate.Derek Turner - 2007 - New York: Cambridge University Press.
    Scientists often make surprising claims about things that no one can observe. In physics, chemistry, and molecular biology, scientists can at least experiment on those unobservable entities, but what about researchers in fields such as paleobiology and geology who study prehistory, where no such experimentation is possible? Do scientists discover facts about the distant past or do they, in some sense, make prehistory? In this book Derek Turner argues that this problem has surprising and important consequences for the scientific realism (...)
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  • Local Underdetermination in Historical Science.Derek Turner - 2005 - Philosophy of Science 72 (1):209-230.
    David Lewis defends the thesis of the asymmetry of overdetermination: later affairs are seldom overdetermined by earlier affairs, but earlier affairs are usually overdetermined by later affairs. Recently, Carol Cleland has argued that since the distinctive methodologies of historical science and experimental science exploit different aspects of this asymmetry, the methodology of historical science is just as good, epistemically speaking, as that of experimental science. This paper shows, first, that Cleland's epistemological conclusion does not follow from the thesis of the (...)
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  • The Scientific Image.William Demopoulos & Bas C. van Fraassen - 1982 - Philosophical Review 91 (4):603.
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  • Rethinking Mechanistic Explanation.Lindley Darden - 2002 - Philosophy of Science 69 (S3):342-353.
    Philosophers of science typically associate the causal‐mechanical view of scientific explanation with the work of Railton and Salmon. In this paper I shall argue that the defects of this view arise from an inadequate analysis of the concept of mechanism. I contrast Salmon’s account of mechanisms in terms of the causal nexus with my own account of mechanisms, in which mechanisms are viewed as complex systems. After describing these two concepts of mechanism, I show how the complex‐systems approach avoids certain (...)
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  • Functional analysis.Robert E. Cummins - 1975 - Journal of Philosophy 72 (November):741-64.
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  • Probability and ecological complexity.Mark Colyvan - 2005 - Biology and Philosophy 20 (4):869-879.
    There is something genuinely puzzling about large-scale simplicity emerging in systems that are complex at the small scale. Consider, for example, a population of hares. Clearly, the number of hares at any given time depends on hare fertility rates, the weather, the number of predators, the health of the predators, availability of hare resources, motor vehicle traffic, individual hare locations, colour of individual hares, and so on. Indeed, given the incredibly complexity of the hares’ environment at the small-scale, it is (...)
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  • Probability and Ecological Complexity.Mark Colyvan - 2005 - Biology and Philosophy 20 (4):869-879.
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  • Prediction and Explanation in Historical Natural Science.Carol E. Cleland - 2011 - British Journal for the Philosophy of Science 62 (3):551-582.
    In earlier work ( Cleland [2001] , [2002]), I sketched an account of the structure and justification of ‘prototypical’ historical natural science that distinguishes it from ‘classical’ experimental science. This article expands upon this work, focusing upon the close connection between explanation and justification in the historical natural sciences. I argue that confirmation and disconfirmation in these fields depends primarily upon the explanatory (versus predictive or retrodictive) success or failure of hypotheses vis-à-vis empirical evidence. The account of historical explanation that (...)
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  • Methodological and epistemic differences between historical science and experimental science.Carol E. Cleland - 2002 - Philosophy of Science 69 (3):447-451.
    Experimental research is commonly held up as the paradigm of "good" science. Although experiment plays many roles in science, its classical role is testing hypotheses in controlled laboratory settings. Historical science is sometimes held to be inferior on the grounds that its hypothesis cannot be tested by controlled laboratory experiments. Using contemporary examples from diverse scientific disciplines, this paper explores differences in practice between historical and experimental research vis-à-vis the testing of hypotheses. It rejects the claim that historical research is (...)
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  • Beyond reduction: mechanisms, multifield integration and the unity of neuroscience.Carl F. Craver - 2005 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 36 (2):373-395.
    Philosophers of neuroscience have traditionally described interfield integration using reduction models. Such models describe formal inferential relations between theories at different levels. I argue against reduction and for a mechanistic model of interfield integration. According to the mechanistic model, different fields integrate their research by adding constraints on a multilevel description of a mechanism. Mechanistic integration may occur at a given level or in the effort to build a theory that oscillates among several levels. I develop this alternative model using (...)
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  • Explanation: a mechanist alternative.William Bechtel & Adele Abrahamsen - 2005 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 36 (2):421-441.
    Explanations in the life sciences frequently involve presenting a model of the mechanism taken to be responsible for a given phenomenon. Such explanations depart in numerous ways from nomological explanations commonly presented in philosophy of science. This paper focuses on three sorts of differences. First, scientists who develop mechanistic explanations are not limited to linguistic representations and logical inference; they frequently employ diagrams to characterize mechanisms and simulations to reason about them. Thus, the epistemic resources for presenting mechanistic explanations are (...)
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  • When What Had to Happen Was Not Bound to Happen: History, Chance, Narrative, Evolution.John Beatty & Isabel Carrera - 2011 - Journal of the Philosophy of History 5 (3):471-495.
    What is it for history to matter? Stephen Gould argued that unpredictability is part of the answer. For example, the “fact“ that repeated replays of the history of life would end differently every time is a sign that history matters to the course of evolution. But there is a problem here: if a particular point in the past leaves open alternative possible futures, then in what sense does that point in the past matter with regard to which of the outcomes (...)
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  • The case for regularity in mechanistic causal explanation.Holly Andersen - 2012 - Synthese 189 (3):415-432.
    How regular do mechanisms need to be, in order to count as mechanisms? This paper addresses two arguments for dropping the requirement of regularity from the definition of a mechanism, one motivated by examples from the sciences and the other motivated by metaphysical considerations regarding causation. I defend a broadened regularity requirement on mechanisms that takes the form of a taxonomy of kinds of regularity that mechanisms may exhibit. This taxonomy allows precise explication of the degree and location of regular (...)
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  • Our Knowledge of the Past: A Philosophy of Historiography.Aviezer Tucker - 2004 - New York: Cambridge University Press.
    How do historians, comparative linguists, biblical and textual critics and evolutionary biologists establish beliefs about the past? How do they know the past? This book presents a philosophical analysis of the disciplines that offer scientific knowledge of the past. Using the analytic tools of contemporary epistemology and philosophy of science the book covers such topics as evidence, theory, methodology, explanation, determination and underdetermination, coincidence, contingency and counterfactuals in historiography. Aviezer Tucker's central claim is that historiography as a scientific discipline should (...)
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  • Explanatory unification.Philip Kitcher - 1981 - Philosophy of Science 48 (4):507-531.
    The official model of explanation proposed by the logical empiricists, the covering law model, is subject to familiar objections. The goal of the present paper is to explore an unofficial view of explanation which logical empiricists have sometimes suggested, the view of explanation as unification. I try to show that this view can be developed so as to provide insight into major episodes in the history of science, and that it can overcome some of the most serious difficulties besetting the (...)
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  • Punctuated equilibria : an alternative to phyletic gradualism.N. Eldredge & S. J. Gould - 2014 - In Francisco José Ayala & John C. Avise (eds.), Essential readings in evolutionary biology. Baltimore: The Johns Hopkins University Press.
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  • What is a mechanism? A counterfactual account.Jim Woodward - 2002 - Proceedings of the Philosophy of Science Association 2002 (3):S366-S377.
    This paper presents a counterfactual account of what a mechanism is. Mechanisms consist of parts, the behavior of which conforms to generalizations that are invariant under interventions, and which are modular in the sense that it is possible in principle to change the behavior of one part independently of the others. Each of these features can be captured by the truth of certain counterfactuals.
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  • What Is a Mechanism? A Counterfactual Account.James Woodward - 2002 - Philosophy of Science 69 (S3):S366-S377.
    This paper presents a counterfactual account of what a mechanism is. Mechanisms consist of parts, the behavior of which conforms to generalizations that are invariant under interventions, and which are modular in the sense that it is possible in principle to change the behavior of one part independently of the others. Each of these features can be captured by the truth of certain counterfactuals.
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  • Making things happen: a theory of causal explanation.James F. Woodward - 2003 - New York: Oxford University Press.
    Woodward's long awaited book is an attempt to construct a comprehensive account of causation explanation that applies to a wide variety of causal and explanatory claims in different areas of science and everyday life. The book engages some of the relevant literature from other disciplines, as Woodward weaves together examples, counterexamples, criticisms, defenses, objections, and replies into a convincing defense of the core of his theory, which is that we can analyze causation by appeal to the notion of manipulation.
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  • Three Kinds of Idealization.Michael Weisberg - 2007 - Journal of Philosophy 104 (12):639-659.
    Philosophers of science increasingly recognize the importance of idealization: the intentional introduction of distortion into scientific theories. Yet this recognition has not yielded consensus about the nature of idealization. e literature of the past thirty years contains disparate characterizations and justifications, but little evidence of convergence towards a common position.
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  • Unique events: The underdetermination of explanation.Aviezer Tucker - 1998 - Erkenntnis 48 (1):61-83.
    The paper explicates unique events and investigates their epistemology. Explications of unique events as individuated, different, and emergent are philosophically uninteresting. Unique events are topics of why-questions that radically underdetermine all their potential explanations. Uniqueness that is relative to a level of scientific development is differentiated from absolute uniqueness. Science eliminates relative uniqueness by discovery of recurrence of events and properties, falsification of assumptions of why-questions, and methodological simplification e.g. by explanatory methodological reduction. Finally, an overview of contemporary philosophical disputes (...)
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  • Bigger than Chaos: Understanding Complexity through Probability.Michael Strevens - 2003 - Harvard University Press.
    In this book, Michael Strevens aims to explain how simplicity can coexist with, indeed be caused by, the tangled interconnections between a complex system's ...
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  • M. STREVENSBigger Than Chaos: Understanding Complexity Through Probability. [REVIEW]M. Strevens - 2010 - British Journal for the Philosophy of Science 61 (4):875-882.
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  • Explanatory pluralism in evolutionary biology.Kim Sterelny - 1996 - Biology and Philosophy 11 (2):193-214.
    The ontological dependence of one domain on another is compatible with the explanatory autonomy of the less basic domain. That autonomy results from the fact that the relationship between two domains can be very complex. In this paper I distinguish two different types of complexity, two ways the relationship between domains can fail to be transparent, both of which are relevant to evolutionary biology. Sometimes high level explanations preserve a certain type of causal or counterfactual information which would be lost (...)
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  • Reconstructing the Past: Parsimony, Evolution, and Inference. [REVIEW]James R. Griesemer & H. Bradley Shaffer - 1992 - Philosophical Review 101 (3):725-729.
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  • Scientific Explanation and the Causal Structure of the World.Wesley C. Salmon - 1984 - Princeton University Press.
    The philosophical theory of scientific explanation proposed here involves a radically new treatment of causality that accords with the pervasively statistical character of contemporary science. Wesley C. Salmon describes three fundamental conceptions of scientific explanation--the epistemic, modal, and ontic. He argues that the prevailing view is untenable and that the modal conception is scientifically out-dated. Significantly revising aspects of his earlier work, he defends a causal/mechanical theory that is a version of the ontic conception. Professor Salmon's theory furnishes a robust (...)
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  • Representation and Reality.Hilary Putnam - 1987 - MIT Press.
    Hilary Putnam, who may have been the first philosopher to advance the notion that the computer is an apt model for the mind, takes a radically new view of his...
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  • Complexity and evolution: What everybody knows.Daniel W. McShea - 1991 - Biology and Philosophy 6 (3):303-324.
    The consensus among evolutionists seems to be that the morphological complexity of organisms increases in evolution, although almost no empirical evidence for such a trend exists. Most studies of complexity have been theoretical, and the few empirical studies have not, with the exception of certain recent ones, been especially rigorous; reviews are presented of both the theoretical and empirical literature. The paucity of evidence raises the question of what sustains the consensus, and a number of suggestions are offered, including the (...)
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  • Mechanistic models of population-level phenomena.John Matthewson & Brett Calcott - 2011 - Biology and Philosophy 26 (5):737-756.
    This paper is about mechanisms and models, and how they interact. In part, it is a response to recent discussion in philosophy of biology regarding whether natural selection is a mechanism. We suggest that this debate is indicative of a more general problem that occurs when scientists produce mechanistic models of populations and their behaviour. We can make sense of claims that there are mechanisms that drive population-level phenomena such as macroeconomics, natural selection, ecology, and epidemiology. But talk of mechanisms (...)
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  • Thinking about mechanisms.Peter Machamer, Lindley Darden & Carl F. Craver - 2000 - Philosophy of Science 67 (1):1-25.
    The concept of mechanism is analyzed in terms of entities and activities, organized such that they are productive of regular changes. Examples show how mechanisms work in neurobiology and molecular biology. Thinking in terms of mechanisms provides a new framework for addressing many traditional philosophical issues: causality, laws, explanation, reduction, and scientific change.
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  • Three kinds of new mechanism.Arnon Levy - 2013 - Biology and Philosophy 28 (1):99-114.
    I distinguish three theses associated with the new mechanistic philosophy – concerning causation, explanation and scientific methodology. Advocates of each thesis are identified and relationships among them are outlined. I then look at some recent work on natural selection and mechanisms. There, attention to different kinds of New Mechanism significantly affects of what is at stake.
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  • Abstraction and the Organization of Mechanisms.Arnon Levy & William Bechtel - 2013 - Philosophy of Science 80 (2):241-261.
    Proponents of mechanistic explanation all acknowledge the importance of organization. But they have also tended to emphasize specificity with respect to parts and operations in mechanisms. We argue that in understanding one important mode of organization—patterns of causal connectivity—a successful explanatory strategy abstracts from the specifics of the mechanism and invokes tools such as those of graph theory to explain how mechanisms with a particular mode of connectivity will behave. We discuss the connection between organization, abstraction, and mechanistic explanation and (...)
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  • The advancement of science: science without legend, objectivity without illusions.Philip Kitcher - 1993 - New York: Oxford University Press.
    During the last three decades, reflections on the growth of scientific knowledge have inspired historians, sociologists, and some philosophers to contend that scientific objectivity is a myth. In this book, Kitcher attempts to resurrect the notions of objectivity and progress in science by identifying both the limitations of idealized treatments of growth of knowledge and the overreactions to philosophical idealizations. Recognizing that science is done not by logically omniscient subjects working in isolation, but by people with a variety of personal (...)
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  • Testing times: regularities in the historical sciences.Ben Jeffares - 2008 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 39 (4):469-475.
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  • Testing times: Regularities in the historical sciences.Ben Jeffares - 2008 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 39 (4):469-475.
    The historical sciences, such as geology, evolutionary biology, and archaeology, appear to have no means to test hypotheses. However, on closer examination, reasoning in the historical sciences relies upon regularities, regularities that can be tested. I outline the role of regularities in the historical sciences, and in the process, blur the distinction between the historical sciences and the experimental sciences: all sciences deploy theories about the world in their investigations.
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  • In Defense of Explanatory Ecumenism.Frank Jackson - 1992 - Economics and Philosophy 8 (1):1-21.
    Many of the things that we try to explain, in both our common sense and our scientific engagement with the world, are capable of being explained more or less finely: that is, with greater or lesser attention to the detail of the producing mechanism. A natural assumption, pervasive if not always explicit, is that other things being equal, the more finegrained an explanation, the better. Thus, Jon Elster, who also thinks there are instrumental reasons for wanting a more fine-grained explanation, (...)
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  • The Topography of Historical Contingency.Rob Inkpen & Derek Turner - 2012 - Journal of the Philosophy of History 6 (1):1-19.
    Abstract Starting with Ben-Menahem's definition of historical contingency as sensitivity to variations in initial conditions, we suggest that historical events and processes can be thought of as forming a complex landscape of contingency and necessity. We suggest three different ways of extending and elaborating Ben-Menahem's concepts: (1) By supplementing them with a notion of historical disturbance; (2) by pointing out that contingency and necessity are subject to scaling effects; (3) by showing how degrees of contingency/necessity can change over time. We (...)
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  • Brill Online Books and Journals.Rob Inkpen & Derek Turner - 2012 - Journal of the Philosophy of History 6 (1):1-19.
    Starting with Ben-Menahem’s definition of historical contingency as sensitivity to variations in initial conditions, we suggest that historical events and processes can be thought of as forming a complex landscape of contingency and necessity. We suggest three different ways of extending and elaborating Ben-Menahem’s concepts: By supplementing them with a notion of historical disturbance; by pointing out that contingency and necessity are subject to scaling effects; by showing how degrees of contingency/necessity can change over time. We also argue that further (...)
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  • The Metaphysics of Evolution: Naqshbandis in the Ottoman World, 1450-1700.David L. Hull - 1989 - State University of New York Press.
    Extreme variation in the meaning of the term “species” throughout the history of biology has often frustrated attempts of historians, philosophers and biologists to communicate with one another about the transition in biological thinking from the static species concept to the modern notion of evolving species. The most important change which has underlain all the other fluctuations in the meaning of the word “species” is the change from it denoting such metaphysical entities as essences, Forms or Natures to denoting classes (...)
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  • The Metaphysics of Evolution.David L. Hull - 1967 - British Journal for the History of Science 3 (4):309-337.
    Extreme variation in the meaning of the term “species” throughout the history of biology has often frustrated attempts of historians, philosophers and biologists to communicate with one another about the transition in biological thinking from the static species concept to the modern notion of evolving species. The most important change which has underlain all the other fluctuations in the meaning of the word “species” is the change from it denoting such metaphysical entities as essences, Forms or Natures to denoting classes (...)
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  • Central Subjects and Historical Narratives.David L. Hull - 1975 - History and Theory 14 (3):253-274.
    A central subject is the main strand around which the fabric of an historical narrative is woven. Such a subject must possess both spatial and temporal continuity. It is integrated into an historical entity through the relationship between those properties which make it an individual, and their interaction with the historical event. Scientific theory is useful in the reconstruction of past events and the definition of the central subject. Ideas used as central subjects present the problem of finding internal principles (...)
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  • Aspects of Scientific Explanation and Other Essays in the Philosophy of Science.Carl Gustav Hempel - 1965 - New York: The Free Press.
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  • Explanatory pluralism in paleobiology.Todd A. Grantham - 1999 - Philosophy of Science 66 (3):236.
    This paper is a defense of "explanatory pluralism" (i.e., the view that some events can be correctly explained in two distinct ways). To defend pluralism, I identify two distinct (but compatible) styles of explanation in paleobiology. The first approach ("actual sequence explanation") traces out the particular forces that affect each species. The second approach treats the trend as "passive" or "random" diffusion away from a boundary in morphological space. I argue that while these strategies are distinct, some trends are correctly (...)
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  • Models and fictions in science.Peter Godfrey-Smith - 2009 - Philosophical Studies 143 (1):101 - 116.
    Non-actual model systems discussed in scientific theories are compared to fictions in literature. This comparison may help with the understanding of similarity relations between models and real-world target systems. The ontological problems surrounding fictions in science may be particularly difficult, however. A comparison is also made to ontological problems that arise in the philosophy of mathematics.
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  • Rethinking mechanistic explanation.Stuart Glennan - 2002 - Proceedings of the Philosophy of Science Association 2002 (3):S342-353.
    Philosophers of science typically associate the causal-mechanical view of scientific explanation with the work of Railton and Salmon. In this paper I shall argue that the defects of this view arise from an inadequate analysis of the concept of mechanism. I contrast Salmon's account of mechanisms in terms of the causal nexus with my own account of mechanisms, in which mechanisms are viewed as complex systems. After describing these two concepts of mechanism, I show how the complex-systems approach avoids certain (...)
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  • Rethinking Mechanistic Explanation.Stuart Glennan - 2002 - Philosophy of Science 69 (S3):S342-S353.
    Philosophers of science typically associate the causal-mechanical view of scientific explanation with the work of Railton and Salmon. In this paper I shall argue that the defects of this view arise from an inadequate analysis of the concept of mechanism. I contrast Salmon's account of mechanisms in terms of the causal nexus with my own account of mechanisms, in which mechanisms are viewed as complex systems. After describing these two concepts of mechanism, I show how the complex-systems approach avoids certain (...)
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  • Ephemeral Mechanisms and Historical Explanation.Stuart Glennan - 2010 - Erkenntnis 72 (2):251-266.
    While much of the recent literature on mechanisms has emphasized the superiority of mechanisms and mechanistic explanation over laws and nomological explanation, paradigmatic mechanisms—e.g., clocks or synapses—actually exhibit a great deal of stability in their behavior. And while mechanisms of this kind are certainly of great importance, there are many events that do not occur as a consequence of the operation of stable mechanisms. Events of natural and human history are often the consequence of causal processes that are ephemeral and (...)
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  • Evidence and Evolution: The Logic Behind the Science.Elliott Sober - 2008 - Cambridge University Press.
    How should the concept of evidence be understood? And how does the concept of evidence apply to the controversy about creationism as well as to work in evolutionary biology about natural selection and common ancestry? In this rich and wide-ranging book, Elliott Sober investigates general questions about probability and evidence and shows how the answers he develops to those questions apply to the specifics of evolutionary biology. Drawing on a set of fascinating examples, he analyzes whether claims about intelligent design (...)
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  • Reconstructing The Past: Parsimony, Evolution, and Inference.Elliott Sober - 1988 - MIT Press.
    Reconstructing the Past seeks to clarify and help resolve the vexing methodological issues that arise when biologists try to answer such questions as whether human beings are more closely related to chimps than they are to gorillas. It explores the case for considering the philosophical idea of simplicity/parsimony as a useful principle for evaluating taxonomic theories of evolutionary relationships. For the past two decades, evolutionists have been vigorously debating the appropriate methods that should be used in systematics, the field that (...)
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