Genes adjacent to species-specific loci are 6.2% older than genes adjacent to other dynamic loci (P < 10−2 by randomization; gray bars in Fig. 3); thus, species-specific genes are not randomly distributed but are found preferentially in the older regions, indicating that the incipient Escherichia and Salmonella lineages continued to participate in recombination at loci unlinked to lineage-specific genes.