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  1. The Functional Perspective of Organismal Biology.Arno Wouters - 2005 - In Thomas A. C. Reydon & Lia Hemerik (eds.), Current Themes in Theoretical Biology : A Dutch Perspective. Springer. pp. 33--69.
    Following Mayr (1961) evolutionary biologists often maintain that the hallmark of biology is its evolutionary perspective. In this view, biologists distinguish themselves from other natural scientists by their emphasis on why-questions. Why-questions are legitimate in biology but not in other natural sciences because of the selective character of the process by means of which living objects acquire their characteristics. For that reason, why-questions should be answered in terms of natural selection. Functional biology is seen as a reductionist science that applies (...)
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  • The Phylogeny Fallacy and Evolutionary Causation (preprint).Tiago Rama - manuscript
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  • Current Bibliography of the History of Science and Its Cultural Influences 2003.Stephen P. Weldon - 2003 - Isis 94:1-93.
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  • Four Pillars of Statisticalism.Denis M. Walsh, André Ariew & Mohan Matthen - 2017 - Philosophy, Theory, and Practice in Biology 9 (1):1-18.
    Over the past fifteen years there has been a considerable amount of debate concerning what theoretical population dynamic models tell us about the nature of natural selection and drift. On the causal interpretation, these models describe the causes of population change. On the statistical interpretation, the models of population dynamics models specify statistical parameters that explain, predict, and quantify changes in population structure, without identifying the causes of those changes. Selection and drift are part of a statistical description of population (...)
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  • Omnipotence and spatiotemporally restricted entities.Kevin Vandergriff - 2018 - International Journal for Philosophy of Religion 84 (1):3-29.
    Many people who claim that evolution and theism are in tension assume that God, being omnipotent, could create life in different ways. For instance, Paul Draper has argued that the fact that life evolved on earth supports naturalism over theism. However, for there to be a probabilistic tension between naturalism and theism, because of the fact of evolution, a certain background assumption must be true, namely, that God could have made biological organisms and species through an act of Genesis-style special (...)
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  • Modelling Molecular Mechanisms: A Framework of Scientific Reasoning to Construct Molecular-Level Explanations for Cellular Behaviour.Marc H. W. van Mil, Dirk Jan Boerwinkel & Arend Jan Waarlo - 2013 - Science & Education 22 (1):93-118.
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  • Confusion and dependence in uses of history.David Slutsky - 2012 - Synthese 184 (3):261-286.
    Many people argue that history makes a special difference to the subjects of biology and psychology, and that history does not make this special difference to other parts of the world. This paper will show that historical properties make no more or less of a difference to biology or psychology than to chemistry, physics, or other sciences. Although historical properties indeed make a certain kind of difference to biology and psychology, this paper will show that historical properties make the same (...)
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  • Function, Dysfunction, and Normality in Biological Sciences.Etienne Roux - 2018 - Biological Theory 13 (1):17-28.
    A biological function is supposed to be performed adequately, and hence may fail to do so: this is dysfunction. This raises two questions. One is how to make explicit the way in which function can be discriminated from dysfunction without confusing dysfunction with non-function. The second question is how what is “right” and “wrong” can be legitimated by natural regulatory norms. A function can be viewed as a quality to which at least one variable with a definite set of values (...)
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  • Vestigial Drifting Drives in Homo sapiens.Paolo Rognini - 2018 - Biological Theory 13 (3):199-211.
    In this study some typical aspects of human behavior are reconsidered in a new evolutionary perspective. Firstly, a theoretical paradigm is introduced, according to which animals show a natural propensity to maintain behavior far beyond the time when the triggering motivation has been removed;, these drifting conducts are defined as Vestigial Drifting Drives or. Such a paradigm is then applied to those human attitudes that once conferred an adaptive advantage on our species but have now become dysfunctional within the framework (...)
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  • When Science Studies Religion: Six Philosophy Lessons for Science Classes.Massimo Pigliucci - 2013 - Science & Education 22 (1):49-67.
    It is an unfortunate fact of academic life that there is a sharp divide between science and philosophy, with scientists often being openly dismissive of philosophy, and philosophers being equally contemptuous of the naivete ́ of scientists when it comes to the philosophical underpinnings of their own discipline. In this paper I explore the possibility of reducing the distance between the two sides by introducing science students to some interesting philosophical aspects of research in evolutionary biology, using biological theories of (...)
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  • The proximate–ultimate distinction and evolutionary developmental biology: causal irrelevance versus explanatory abstraction.Massimo Pigliucci & Raphael Scholl - 2015 - Biology and Philosophy 30 (5):653-670.
    Mayr’s proximate–ultimate distinction has received renewed interest in recent years. Here we discuss its role in arguments about the relevance of developmental to evolutionary biology. We show that two recent critiques of the proximate–ultimate distinction fail to explain why developmental processes in particular should be of interest to evolutionary biologists. We trace these failures to a common problem: both critiques take the proximate–ultimate distinction to neglect specific causal interactions in nature. We argue that this is implausible, and that the distinction (...)
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  • Answering evolutionary questions: A guide for mechanistic biologists.Joanna Masel & Daniel E. L. Promislow - 2016 - Bioessays 38 (7):704-711.
    The questions and methods of molecular biology and evolutionary biology are clearly distinct, yet a unified approach can lead to deep insights. Unfortunately, attempts to unify these approaches are fraught with pitfalls. In this informal series of questions and answers, we offer the mechanistically oriented biologist a set of steps to come up with evolutionarily reasonable and meaningful hypotheses. We emphasize the critical power and importance of carefully constructed null hypotheses, and we illustrate our ideas with examples representing a range (...)
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  • More on how and why: cause and effect in biology revisited.Kevin N. Laland, John Odling-Smee, William Hoppitt & Tobias Uller - 2012 - Biology and Philosophy 28 (5):719-745.
    In 1961, Ernst Mayr published a highly influential article on the nature of causation in biology, in which he distinguished between proximate and ultimate causes. Mayr argued that proximate causes (e.g. physiological factors) and ultimate causes (e.g. natural selection) addressed distinct ‘how’ and ‘why’ questions and were not competing alternatives. That distinction retains explanatory value today. However, the adoption of Mayr’s heuristic led to the widespread belief that ontogenetic processes are irrelevant to evolutionary questions, a belief that has (1) hindered (...)
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  • More on how and why: a response to commentaries.Kevin N. Laland, John Odling-Smee, William Hoppitt & Tobias Uller - 2013 - Biology and Philosophy 28 (5):793-810.
    We are grateful to the commentators for taking the time to respond to our article. Too many interesting and important points have been raised for us to tackle them all in this response, and so in the below we have sought to draw out the major themes. These include problems with both the term ‘ultimate causation’ and the proximate-ultimate causation dichotomy more generally, clarification of the meaning of reciprocal causation, discussion of issues related to the nature of development and phenotypic (...)
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  • Preliminary Evolutionary Explanations: A Basic Framework for Conceptual Change and Explanatory Coherence in Evolution.Kostas Kampourakis & Vasso Zogza - 2009 - Science & Education 18 (10):1313-1340.
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  • The phylogeny fallacy and the ontogeny fallacy.Adam Hochman - 2013 - Biology and Philosophy 28 (4):593-612.
    In 1990 Robert Lickliter and Thomas Berry identified the phylogeny fallacy, an empirically untenable dichotomy between proximate and evolutionary causation, which locates proximate causes in the decoding of ‘ genetic programs’, and evolutionary causes in the historical events that shaped these programs. More recently, Lickliter and Hunter Honeycutt argued that Evolutionary Psychologists commit this fallacy, and they proposed an alternative research program for evolutionary psychology. For these authors the phylogeny fallacy is the proximate/evolutionary distinction itself, which they argue constitutes a (...)
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  • Ultimate explanations concern the adaptive rationale for organism design.Andy Gardner - 2013 - Biology and Philosophy 28 (5):787-791.
    My understanding is that proximate explanations concern adaptive mechanism and that ultimate explanations concern adaptive rationale. Viewed in this light, the two kinds of explanation are quite distinct, but they interact in a complementary way to give a full understanding of biological adaptations. In contrast, Laland et al. (2013)—following a literal reading of Mayr (Science 134:1501–1506, 1961)—have characterized ultimate explanations as concerning any and all mechanisms that have operated over the course of an organism’s evolutionary history. This has unfortunate consequences, (...)
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  • Is Evolutionary Psychology Possible?Subrena E. Smith - 2019 - Biological Theory 15 (1):39-49.
    In this article I argue that evolutionary psychological strategies for making inferences about present-day human psychology are methodologically unsound. Evolutionary psychology is committed to the view that the mind has an architecture that has been conserved since the Pleistocene, and that our psychology can be fruitfully understood in terms of the original, fitness-enhancing functions of these conserved psychological mechanisms. But for evolutionary psychological explanations to succeed, practitioners must be able to show that contemporary cognitive mechanisms correspond to those that were (...)
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  • Integrating the multiple biological causes of human behavior.Stephen M. Downes - 2005 - Biology and Philosophy 20 (1):177-190.
    I introduce a range of examples of different causal hypotheses about human mate selection. The hypotheses I focus on come from evolutionary psychology, fluctuating asymmetry research and chemical signaling research. I argue that a major obstacle facing an integrated biology of human behavior is the lack of a causal framework that shows how multiple proximate causal mechanisms can act together to produce components of our behavior.
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  • Individual essentialism in biology.Michael Devitt - 2018 - Biology and Philosophy 33 (5-6):39.
    A few philosophers of biology have recently explicitly rejected Essential Membership, the doctrine that if an individual organism belongs to a taxon, particularly a species, it does so essentially. But philosophers of biology have not addressed the broader issue, much discussed by metaphysicians on the basis of modal intuitions, of what is essential to the organism. In this paper, I address that issue from a biological basis, arguing for the Kripkean view that an organism has a partly intrinsic, partly historical, (...)
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  • Musical pluralism and the science of music.Adrian Currie & Anton Killin - 2016 - European Journal for Philosophy of Science 6 (1):9-30.
    The scientific investigation of music requires contributions from a diverse array of disciplines. Given the diverse methodologies, interests and research targets of the disciplines involved, we argue that there is a plurality of legitimate research questions about music, necessitating a focus on integration. In light of this we recommend a pluralistic conception of music—that there is no unitary definition divorced from some discipline, research question or context. This has important implications for how the scientific study of music ought to proceed: (...)
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  • Mayr and Tinbergen: disentangling and integrating.Brandon A. Conley - 2020 - Biology and Philosophy 35 (1):4.
    Research on animal behavior is typically organized according to a combination of two influential frameworks: Ernst Mayr’s distinction between proximate and ultimate causes, and Niko Tinbergen’s “four questions”. My aim is to debunk two common interpretive misconceptions about Mayr’s proximate–ultimate distinction and its relationship to Tinbergen’s four questions, and to offer a new interpretation that avoids both. The first misconception is that the proximate–ultimate distinction maps cleanly onto Tinbergen’s four questions, marking a boundary between Tinbergen’s evolutionary and survival value questions (...)
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  • Why how and why aren’t enough: more problems with Mayr’s proximate-ultimate distinction.Brett Calcott - 2013 - Biology and Philosophy 28 (5):767-780.
    Like Laland et al., I think Mayr’s distinction is problematic, but I identify a further problem with it. I argue that Mayr’s distinction is a false dichotomy, and obscures an important question about evolutionary change. I show how this question, once revealed, sheds light on some debates in evo-devo that Laland et al.’s analysis cannot, and suggest that it provides a different view about how future integration between biological disciplines might proceed.
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  • The other cooperation problem: Generating benefit.Brett Calcott - 2008 - Biology and Philosophy 23 (2):179-203.
    Understanding how cooperation evolves is central to explaining some core features of our biological world. Many important evolutionary events, such as the arrival of multicellularity or the origins of eusociality, are cooperative ventures between formerly solitary individuals. Explanations of the evolution of cooperation have primarily involved showing how cooperation can be maintained in the face of free-riding individuals whose success gradually undermines cooperation. In this paper I argue that there is a second, distinct, and less well explored, problem of cooperation (...)
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  • Causality, Teleology, and Thought Experiments in Biology.Marco Buzzoni - 2015 - Journal for General Philosophy of Science / Zeitschrift für Allgemeine Wissenschaftstheorie 46 (2):279-299.
    Thought experiments de facto play many different roles in biology: economical, ethical, technical and so forth. This paper, however, is interested in whether there are any distinctive features of biological TEs as such. The question may be settled in the affirmative because TEs in biology have a function that is intimately connected with the epistemological and methodological status of biology. Peculiar to TEs in biology is the fact that the reflexive, typically human concept of finality may be profitably employed to (...)
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  • Dual Causality and the Autonomy of Biology.Walter J. Bock - 2017 - Acta Biotheoretica 65 (1):63-79.
    Ernst Mayr’s concept of dual causality in biology with the two forms of causes continues to provide an essential foundation for the philosophy of biology. They are equivalent to functional and evolutionary causes with both required for full biological explanations. The natural sciences can be classified into nomological, historical nomological and historical dual causality, the last including only biology. Because evolutionary causality is unique to biology and must be included for all complete biological explanations, biology is autonomous from the physical (...)
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  • Natural Selection and the Nature of Statistical Explanations.Roger Deulofeu Batllori - forthcoming - Critica:27-52.
    There is a widespread philosophical interpretation of natural selection in evolutionary theory: natural selection, like mutation, migration, and drift are seen as forces that propel the evolution of populations. Natural selection is thus a population level causal process. This account has been challenged by the Statistics, claiming that natural selection is not a population level cause but rather a statistical feature of a population. This paper examines the nature of the aforementioned ontological debate and the nature of statistical explanations given (...)
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  • The proximate-ultimate distinction and the active role of the organism in evolution.Bendik Hellem Aaby & Grant Ramsey - 2022 - Biology and Philosophy 37 (4):1-20.
    The validity and utility of the proximate-ultimate distinction in biology have recently been under debate. Opponents of the distinction argue that it rules out individual-level organismic processes from evolutionary explanations, thereby leading to an unfounded separation between organismic causation and evolutionary causation. Proponents of the proximate-ultimate distinction, on the other hand, argue that it serves an important epistemological role in forming different kinds of explanation-seeking questions in biology. In this paper we offer an interpretation the proximate-ultimate distinction not only as (...)
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  • The Historical Transformation of Individual Concepts into Populational Ones: An Explanatory Shift in the Gestation of the Modern Synthesis.Tiago Rama - manuscript
    In this paper, I will conduct three interrelated analyses. First, I will develop an analysis of various concepts in the history of biology that used to refer to individual-level phenomena but were then reinterpreted by the Modern Synthesis in terms of populations. Second, I argue that a similar situation can be found in contemporary biological theory. While different approaches reflect on the causal role of developing organisms in evolution, proponents of the Modern Synthesis avoid any substantial change by reinterpreting and (...)
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  • International Handbook of Research in History, Philosophy and Science Teaching.Michael R. Matthews (ed.) - 2014 - Springer.
    This inaugural handbook documents the distinctive research field that utilizes history and philosophy in investigation of theoretical, curricular and pedagogical issues in the teaching of science and mathematics. It is contributed to by 130 researchers from 30 countries; it provides a logically structured, fully referenced guide to the ways in which science and mathematics education is, informed by the history and philosophy of these disciplines, as well as by the philosophy of education more generally. The first handbook to cover the (...)
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  • Explanatory Internalism: Challenging Selected-Effect Functions (prerpint).Tiago Rama - manuscript
    Explanatory Externalism states that the only adaptive force in evolution is natural selection. Explanatory Externalism is a central thesis of the Modern Evolutionary Synthesis. The etiological theory of natural selected-effect functions also advocates Explanatory Externalism. According to this theory, natural selection is the process responsible for determining the proper natural functions of traits. However, I will point out several challenges to Explanatory Externalism that are proposed primarily by developmental biology and its various subfields. Based on these challenges, this paper will (...)
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  • Special Issue: Philosophical Considerations in the Teaching of Biology. Part I, Philosophy of Biology and Biological Explanation.Kostas Kampourakis (ed.) - 2013 - Springer (Science & Education).
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  • Framing emotion : Concepts, categories, and meta-scientific frameworks.Kyle R. Takaki - unknown
    Thesis (Ph.D.)--University of Hawaii at Manoa, 2008.
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  • Biosemiotics and Applied Evolutionary Epistemology: A Comparison.Nathalie Gontier & M. Facoetti - 2021 - In In: Pagni E., Theisen Simanke R. (eds) Biosemiotics and Evolution. Interdisciplinary Evolution Research, vol 6. Springer, Cham. Cham: pp. 175-199.
    Both biosemiotics and evolutionary epistemology are concerned with how knowledge evolves. (Applied) Evolutionary Epistemology thereby focuses on identifying the units, levels, and mechanisms or processes that underlie the evolutionary development of knowing and knowledge, while biosemiotics places emphasis on the study of how signs underlie the development of meaning. We compare the two schools of thought and analyze how in delineating their research program, biosemiotics runs into several problems that are overcome by evolutionary epistemologists. For one, by emphasizing signs, biosemiotics (...)
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  • Organism-Environment Interactions in Evolutionary Theory.Bendik Hellem Aaby - 2021 - Dissertation, Ku Leuven
    This dissertation concerns the active role of the organism in evolutionary theory. In particular, it concerns how our conception of the relationship between organism and environment, and the nature of natural selection, influences the causal and explanatory role of organismic activity and behavior in evolutionary explanations. The overarching aim is to argue that the behaviors and activities of organisms can serve both as the explananda (that which is explained) and the explanantia (that which explains) in evolutionary explanations. I attempt to (...)
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  • Evolutionary Debunking Arguments in Ethics.Andreas Lech Mogensen - 2014 - Dissertation, University of Oxford
    I consider whether evolutionary explanations can debunk our moral beliefs. Most contemporary discussion in this area is centred on the question of whether debunking implications follow from our ability to explain elements of human morality in terms of natural selection, given that there has been no selection for true moral beliefs. By considering the most prominent arguments in the literature today, I offer reasons to think that debunking arguments of this kind fail. However, I argue that a successful evolutionary debunking (...)
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  • Modeling in Biology: looking backward and looking forward.Steven Hecht Orzack & Brian McLoone - 2019 - Studia Metodologiczne 39.
    Understanding modeling in biology requires understanding how biology is organized as a discipline and how this organization influences the research practices of biologists. Biology includes a wide range of sub-disciplines, such as cell biology, population biology, evolutionary biology, molecular biology, and systems biology among others. Biologists in sub-disciplines such as cell, molecular, and systems biology believe that the use of a few experimental models allows them to discover biological universals, whereas biologists in sub-disciplines such as ecology and evolutionary biology believe (...)
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  • Projectivism psychologized: the philosophy and psychology of disgust.Daniel R. Kelly - unknown
    This dissertation explores issues in the philosophy of psychology and metaphysics through the lens of the emotion of disgust, and its corresponding property, disgustingness. The first chapter organizes an extremely large body of data about disgust, imposes two constraints any theory must meet, and offers a cognitive model of the mechanisms underlying the emotion. The second chapter explores the evolution of disgust, and argues for the Entanglement thesis: this uniquely human emotion was formed when two formerly distinct mechanisms, one dedicated (...)
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  • Environmental Ethics.Roberta L. Millstein - 2013 - In K. Kampourakis (ed.), The Philosophy of Biology: A Companion for Educators. Springer.
    A number of areas of biology raise questions about what is of value in the natural environment and how we ought to behave towards it: conservation biology, environmental science, and ecology, to name a few. Based on my experience teaching students from these and similar majors, I argue that the field of environmental ethics has much to teach these students. They come to me with pent-up questions and a feeling that more is needed to fully engage in their subjects, and (...)
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  • Population thinking vs. essentialism in biology and evolutionary economics.George Liagouras - 2017 - In Evolutionary Political Economy in Action. A Cyprus Symposium, Routledge. London & New York: pp. 36-53.
    The standard perception of the dichotomy between population thinking and essentialism (typological thinking) in evolutionary economics descends from the golden age of the neo-Darwinian Synthesis. Over the last few decades the received view on population thinking has been seriously challenged in biology and its philosophy. First, the strong version of population thinking that banishes essentialism witnessed important tensions stemming from the ontological status of species. These tensions have been amplified by the demise of positivism and the rise of a new (...)
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  • Biological Explanation.Angela Potochnik - 2013 - In Kostas Kampourakis (ed.), The Philosophy of Biology: A Companion for Educators. Springer. pp. 49-65.
    One of the central aims of science is explanation: scientists seek to uncover why things happen the way they do. This chapter addresses what kinds of explanations are formulated in biology, how explanatory aims influence other features of the field of biology, and the implications of all of this for biology education. Philosophical treatments of scientific explanation have been both complicated and enriched by attention to explanatory strategies in biology. Most basically, whereas traditional philosophy of science based explanation on derivation (...)
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  • The Challenge of Evo-Devo: Implications for evolutionary economists.George Liagouras - manuscript
    Usually evolutionary economists equate evolutionary theory with modern Darwinism. However the rise of evolutionary developmental biology (Evo-Devo) puts into question the monopoly of Darwinism in evolutionary biology. The major divergences between the two paradigms in evolutionary biology are drawn in the analysis of three trade-offs: population vs. typological thinking, creative role of natural selection vs. internal (inherent) change, and microevolution vs. macroevolution. It is argued here that the Evo-Devo breakthrough helps to better understand the limits to Darwinism in the social (...)
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