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  1. Neuroepigenetics in Philosophical Focus: A Critical Analysis of the Philosophy of Mechanisms.Antonella Tramacere & John Bickle - 2024 - Biological Theory 19 (1):56-71.
    Epigenetics investigates the dynamics of gene expression in various cells, and the signals from the internal and external environment affecting these dynamics. Neuroepigenetics extends this research into neurons and glia cells. Environmental-induced changes in gene expression are not only associated with the emerging structure and function of the nervous system during ontogeny, but are also fundamental to the wiring of neural circuitries responsible for learning and memory. Yet philosophers of science and neuroscience have so far paid little attention to these (...)
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  • The Heuristic of Form: Mitochondrial Morphology and the Explanation of Oxidative Phosphorylation.Karl S. Matlin - 2016 - Journal of the History of Biology 49 (1):37-94.
    In the 1950s and 1960s, the search for the mechanism of oxidative phosphorylation by biochemists paralleled the description of mitochondrial form by George Palade and Fritiof Sjöstrand using electron microscopy. This paper explores the extent to which biochemists studying oxidative phosphorylation took mitochondrial form into account in the formulation of hypotheses, design of experiments, and interpretation of results. By examining experimental approaches employed by the biochemists studying oxidative phosphorylation, and their interactions with Palade, I suggest that use of mitochondrial form (...)
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  • Contrasting Approaches to a Biological Problem: Paul Boyer, Peter Mitchell and the Mechanism of the ATP Synthase, 1961–1985. [REVIEW]John N. Prebble - 2013 - Journal of the History of Biology 46 (4):699-737.
    Attempts to solve the puzzling problem of oxidative phosphorylation led to four very different hypotheses each of which suggested a different view of the ATP synthase, the phosphorylating enzyme. During the 1960s and 1970s evidence began to accumulate which rendered Peter Mitchell’s chemiosmotic hypothesis, the novel part of which was the proton translocating ATP synthase (ATPase), a plausible explanation. The conformational hypothesis of Paul Boyer implied an enzyme where ATP synthesis was driven by the energy of conformational changes in the (...)
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  • Two Accounts of the Hermeneutic Fore-structure of Scientific Research.Dimitri Ginev - 2012 - International Studies in the Philosophy of Science 26 (4):423-445.
    In this article, I examine various aspects of the application of Heidegger's motif of interpretative articulation (the core phenomenological motif of existential analytic) to the constitutional analysis of meaningful objects in scientific research that are contextually ready-to-hand. It is my contention that not only the concepts of the ‘fore-structure of understanding’ and the ‘as-structure of interpretation’, but also the extended concepts of the ‘hermeneutic fore-structure of meaning constitution’ and ‘characteristic hermeneutic situation’ are the keys to understanding the interpretative nature of (...)
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  • Leyes, mecanismos y modelos en biología: el caso de la genética mendeliana.Mario Casanueva - 2017 - Scientiae Studia 15 (2):343.
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  • How mechanisms explain interfield cooperation: biological–chemical study of plant growth hormones in Utrecht and Pasadena, 1930–1938.Caterina Schürch - 2017 - History and Philosophy of the Life Sciences 39 (3):16.
    This article examines to what extent a particular case of cross-disciplinary research in the 1930s was structured by mechanistic reasoning. For this purpose, it identifies the interfield theories that allowed biologists and chemists to use each other’s techniques and findings, and that provided the basis for the experiments performed to identify plant growth hormones and to learn more about their role in the mechanism of plant growth. In 1930, chemists and biologists in Utrecht and Pasadena began to cooperatively study plant (...)
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  • The discovery of oxidative phosphorylation: a conceptual off-shoot from the study of glycolysis.John N. Prebble - 2010 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 41 (3):253-262.
    The origins of oxidative phosphorylation, initially known as aerobic phosphorylation, grew out of three research areas of muscle metabolism, creatine phosphorylation, aerobic metabolism of lactic acid in muscle, and studies on the nature and role of adenosine triphosphate . Much of this work centred round the laboratory of Otto Meyerhof, and most of those contributing to the study of aerobic phosphorylation were influenced by that laboratory: particularly Lipmann and also Ochoa. The work of Engelhardt on ATP levels in blood also (...)
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  • From Entomological Research to Culturing Tissues: Aron Moscona’s Investigative Pathway.Alessandra Passariello - 2021 - Journal of the History of Biology 54 (4):555-601.
    Aron Arthur Moscona was an Israeli-American developmental biologist whose name is associated with research on cell interactions during embryonic development. His appearance on the international scene dates back to a paper published in 1952, while he was working, together with his wife Haya Sobel Moscona, at the Strangeways Research Laboratory of Cambridge. Together they demonstrated that cells from previously dissociated chick tissues undergo histiotypical and organotypical aggregation in vitro. From 1952 to 1997, Moscona focused his research on cell recognition mechanisms, (...)
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  • Blobel and Sabatini’s “Beautiful Idea”: Visual Representations of the Conception and Refinement of the Signal Hypothesis.Michelle Lynne LaBonte - 2017 - Journal of the History of Biology 50 (4):797-833.
    In 1971, Günter Blobel and David Sabatini proposed a novel and quite speculative schematic model to describe how proteins might reach the proper cellular location. According to their proposal, proteins destined to be secreted from the cell contain a “signal” to direct their release. Despite the fact that Blobel and Sabatini presented their signal hypothesis as a “beautiful idea” not grounded in experimental evidence, they received criticism from other scientists who opposed such speculation. Following the publication of the 1971 model, (...)
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