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  1. Typology and Natural Kinds in Evo-Devo.Ingo Brigandt - 2021 - In Nuño De La Rosa Laura & Müller Gerd (eds.), Evolutionary Developmental Biology: A Reference Guide. Springer. pp. 483-493.
    The traditional practice of establishing morphological types and investigating morphological organization has found new support from evolutionary developmental biology (evo-devo), especially with respect to the notion of body plans. Despite recurring claims that typology is at odds with evolutionary thinking, evo-devo offers mechanistic explanations of the evolutionary origin, transformation, and evolvability of morphological organization. In parallel, philosophers have developed non-essentialist conceptions of natural kinds that permit kinds to exhibit variation and undergo change. This not only facilitates a construal of species (...)
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  • Beyond congruence: evidential integration and inferring the best evolutionary scenario.Arsham Nejad Kourki - 2022 - Biology and Philosophy 37 (5):1-25.
    Molecular methods have revolutionised virtually every area of biology, and metazoan phylogenetics is no exception: molecular phylogenies, molecular clocks, comparative phylogenomics, and developmental genetics have generated a plethora of molecular data spanning numerous taxa and collectively transformed our understanding of the evolutionary history of animals, often corroborating but at times opposing results of more traditional approaches. Moreover, the diversity of methods and models within molecular phylogenetics has resulted in significant disagreement among molecular phylogenies as well as between these and earlier (...)
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  • The integrative approach to inferring homology: morphology and development combined.Arsham Nejad Kourki - 2022 - Biology and Philosophy 37 (4):1-24.
    Reconstructing ancestral species is a challenging endeavour: fossils are often scarce or enigmatic, and inferring ancestral characters based on novel molecular approaches has long been controversial. A key philosophical challenge pertinent at present is the lack of a theoretical framework capable of evaluating inferences of homology made through integration of multiple kinds of evidence. Here, I present just such a framework. I start with a brief history and critical assessment of attempts at inferring morphological homology through developmental genetics. I then (...)
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  • The Comet Cometh: Evolving Developmental Systems.Johannes Jaeger, Manfred Laubichler & Werner Callebaut - 2015 - Biological Theory 10 (1):36-49.
    In a recent opinion piece, Denis Duboule has claimed that the increasing shift towards systems biology is driving evolutionary and developmental biology apart, and that a true reunification of these two disciplines within the framework of evolutionary developmental biology may easily take another 100 years. He identifies methodological, epistemological, and social differences as causes for this supposed separation. Our article provides a contrasting view. We argue that Duboule’s prediction is based on a one-sided understanding of systems biology as a science (...)
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