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  1. Shadows of complexity: what biological networks reveal about epistasis and pleiotropy.Anna L. Tyler, Folkert W. Asselbergs, Scott M. Williams & Jason H. Moore - 2009 - Bioessays 31 (2):220-227.
    Pleiotropy, in which one mutation causes multiple phenotypes, has traditionally been seen as a deviation from the conventional observation in which one gene affects one phenotype. Epistasis, or gene–gene interaction, has also been treated as an exception to the Mendelian one gene–one phenotype paradigm. This simplified perspective belies the pervasive complexity of biology and hinders progress toward a deeper understanding of biological systems. We assert that epistasis and pleiotropy are not isolated occurrences, but ubiquitous and inherent properties of biomolecular networks. (...)
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  • Adaptationism and adaptive thinking in evolutionary psychology.Matthew Rellihan - 2012 - Philosophical Psychology 25 (2):245-277.
    Evolutionary psychologists attempt to infer our evolved psychology from the selection pressures present in our ancestral environments. Their use of this inference strategy—often called “adaptive thinking”—is thought to be justified by way of appeal to a rather modest form of adaptationism, according to which the mind's adaptive complexity reveals it to be a product of selection. I argue, on the contrary, that the mind's being an adaptation is only a necessary and not a sufficient condition for the validity of adaptive (...)
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  • Evolutionary genetics: Progress and challenges.Jianzhi Zhang - 2010 - In M. A. Bell, D. J. Futuyma, W. F. Eanes & J. S. Levinton (eds.), Evolution Since Darwin: The First 150 Years. Sinauer. pp. 87--118.
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  • Waddington’s Unfinished Critique of Neo-Darwinian Genetics: Then and Now.Adam S. Wilkins - 2008 - Biological Theory 3 (3):224-232.
    C.H. Waddington is today remembered chiefly as a Drosophila developmental geneticist who developed the concepts of “canalization” and “the epigenetic landscape.” In his lifetime, however, he was widely perceived primarily as a critic of Neo-Darwinian evolutionary theory. His criticisms of Neo-Darwinian evolutionary theory were focused on what he saw as unrealistic, “atomistic” models of both gene selection and trait evolution. In particular, he felt that the Neo-Darwinians badly neglected the phenomenon of extensive gene interactions and that the “randomness” of mutational (...)
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  • Evolutionary systems biology: What it is and why it matters.Orkun S. Soyer & Maureen A. O'Malley - 2013 - Bioessays 35 (8):696-705.
    Evolutionary systems biology (ESB) is a rapidly growing integrative approach that has the core aim of generating mechanistic and evolutionary understanding of genotype‐phenotype relationships at multiple levels. ESB's more specific objectives include extending knowledge gained from model organisms to non‐model organisms, predicting the effects of mutations, and defining the core network structures and dynamics that have evolved to cause particular intracellular and intercellular responses. By combining mathematical, molecular, and cellular approaches to evolution, ESB adds new insights and methods to the (...)
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