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  1. Randomization and Rules for Causal Inferences in Biology: When the Biological Emperor (Significance Testing) Has No Clothes.Kristin Shrader-Frechette - 2011 - Biological Theory 6 (2):154-161.
    Why do classic biostatistical studies, alleged to provide causal explanations of effects, often fail? This article argues that in statistics-relevant areas of biology—such as epidemiology, population biology, toxicology, and vector ecology—scientists often misunderstand epistemic constraints on use of the statistical-significance rule (SSR). As a result, biologists often make faulty causal inferences. The paper (1) provides several examples of faulty causal inferences that rely on tests of statistical significance; (2) uncovers the flawed theoretical assumptions, especially those related to randomization, that likely (...)
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  • Agent-based Models as Fictive Instantiations of Ecological Processes.Steven L. Peck - 2012 - Philosophy, Theory, and Practice in Biology 4 (20130604).
    Frigg and Reiss (2009) argue that philosophical problems in simulation bear enough resemblance to recognized issues in the philosophy of modeling that they only pose challenges analogous to those found in standard analytic models used to represent natural systems. They suggest that there are no new philosophical problems in computer simulation modeling beyond those found in traditional mathematical modeling. Winsberg (2009) has countered that there appear to be genuinely new epistemological problems in simulation modeling because the knowledge obtained from them (...)
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  • Against Lawton’s Contingency Thesis; or, Why the Reported Demise of Community Ecology Is Greatly Exaggerated.Stefan Linquist - 2015 - Philosophy of Science 82 (5):1104-1115.
    Lawton’s contingency thesis states that there are no useful generalizations at the level of ecological communities because these systems are especially prone to contingent historical events. I argue that this influential thesis has been grounded on the wrong kind of evidence. CT is best understood in Woodward’s terms as a claim about the instability of certain causal dependencies across different background conditions. A recent distinction between evolution and ecology reveals what an adequate test of Lawton’s thesis would look like. To (...)
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  • General Unificatory Theories in Community Ecology.Christopher Hunter Lean - 2019 - Philosophical Topics 47 (1):125-142.
    The question of whether there are laws of nature in ecology has developed substantially in the last 20 years. Many have attempted to rehabilitate ecology’s lawlike status through establishing that ecology possesses laws that robustly appear across many different ecological systems. I argue that there is still something missing, which explains why so many have been skeptical of ecology’s lawlike status. Community ecology has struggled to establish what I call a General Unificatory Theory. The lack of a GUT causes problems (...)
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  • The myth of Frederic Clements’s mutualistic organicism, or: on the necessity to distinguish different concepts of organicism.Thomas Kirchhoff - 2020 - History and Philosophy of the Life Sciences 42 (2):1-27.
    In the theory and history of ecology, Frederic Clements’s theory of plant communities is usually presented as the historical prototype and a paradigmatic example of synecological organicism, characterised by the assumption that ecological communities are functionally integrated units of mutually dependent species. In this paper, I will object to this standard interpretation of Clements’s theory. Undoubtedly, Clements compares plant communities with organisms and calls them “complex organisms” and “superorganisms”. Further, he can indeed be regarded as a proponent of ecological organicism—provided (...)
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  • The problem of prediction in invasion biology.Alkistis Elliott-Graves - 2016 - Biology and Philosophy 31 (3):373-393.
    Invasion biology is a relatively young discipline which is important, interesting and currently in turmoil. Biological invaders can threaten native ecosystems and global biodiversity; they can incur massive economic costs and even introduce diseases. Invasion biologists generally agree that being able to predict when and where an invasion will occur is essential for progress in their field. However, successful predictions of this type remain elusive. This has caused a rift, as some researchers are pessimistic and believe that invasion biology has (...)
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  • Competition Theory and Channeling Explanation.Christopher H. Eliot - 2011 - Philosophy, Theory, and Practice in Biology 3 (20130604):1-16.
    The complexity and heterogeneity of causes influencing ecology’s domain challenge its capacity to generate a general theory without exceptions, raising the question of whether ecology is capable, even in principle, of achieving the sort of theoretical success enjoyed by physics. Weber has argued that competition theory built around the Competitive Exclusion Principle (especially Tilman’s resource-competition model) offers an example of ecology identifying a law-like causal regularity. However, I suggest that as Weber presents it, the CEP is not yet a causal (...)
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  • Ecology.Sahotra Sarkar - 2008 - Stanford Encyclopedia of Philosophy.
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  • Laws, Models, and Theories in Biology: A Unifying Interpretation.Pablo Lorenzano - 2020 - In Lorenzo Baravalle & Luciana Zaterka (eds.), Life and Evolution, History, Philosophy and Theory of the Life Sciences. pp. 163-207.
    Three metascientific concepts that have been object of philosophical analysis are the concepts oflaw, model and theory. The aim ofthis article is to present the explication of these concepts, and of their relationships, made within the framework of Sneedean or Metatheoretical Structuralism (Balzer et al. 1987), and of their application to a case from the realm of biology: Population Dynamics. The analysis carried out will make it possible to support, contrary to what some philosophers of science in general and of (...)
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  • Individual Based Models in Ecology: An Evaluation, or How Not to Ruin a Good Thing.Joan Roughgarden - unknown
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