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Biomedical Ontologies

In Peter L. Elkin (ed.), Terminology, Ontology and Their Implementations: Teaching Guide and Notes. Springer. pp. 125-169 (2022)

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  1. Ontologies of Common Sense, Physics and Mathematics.Jobst Landgrebe & Barry Smith - 2023 - Archiv.
    The view of nature we adopt in the natural attitude is determined by common sense, without which we could not survive. Classical physics is modelled on this common-sense view of nature, and uses mathematics to formalise our natural understanding of the causes and effects we observe in time and space when we select subsystems of nature for modelling. But in modern physics, we do not go beyond the realm of common sense by augmenting our knowledge of what is going on (...)
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  • The bridge between philosophy and information-driven science.Barry Smith - 2021 - Journal of Knowledge Structures and Systems 2 (2):47-55.
    This essay is a response to Luis M. Augusto’s intriguing paper on the rift between mainstream and formal ontology. I will show that there are in fact two questions at issue here: 1. concerning the links between mainstream and formal approaches within philosophy, and 2. concerning the application of philosophy (and especially philosophical ontology) in support of information-driven research for example in the life sciences.
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