392 found
Order:
Disambiguations
Barry Smith [386]Barry C. Smith [9]
See also
Profile: Barry Smith (State University of New York, Buffalo)
Profile: Barry C. Smith (School of Advanced Study, University of London)
  1. The Chinese Rune Argument.Barry Smith - 2000 - Philosophical Explorations 4 (2):66-74.
    Searle’s tool for understanding culture, law and society is the opposition between brute reality and institutional reality, or in other words between: observer-independent features of the world, such as force, mass and gravitational attraction, and observer-relative features of the world, such as money, property, marriage and government. The question posed here is: under which of these two headings do moral concepts fall? This is an important question because there are moral facts – for example pertaining to guilt and responsibility – (...)
    Download  
     
    Export citation  
     
    My bibliography   100 citations  
  2. The Relevance of Philosophical Ontology to Information and Computer Science.Barry Smith - 2014 - In Ruth Hagengruber & Uwe Riss (eds.), Philosophy, Computing and Information Science. Chatto & Pickering. pp. 75-83.
    The discipline of ontology has enjoyed a checkered history since 1606, with a significant expansion in recent years. We focus here on those developments in the recent history of philosophy which are most relevant to the understanding of the increased acceptance of ontology, and especially of realist ontology, as a valuable method also outside the discipline of philosophy.
    Download  
     
    Export citation  
     
    My bibliography  
  3. Truth-Makers.Kevin Mulligan, Peter Simons & Barry Smith - 1984 - Philosophy and Phenomenological Research 44 (3):287-321.
    A realist theory of truth for a class of sentences holds that there are entities in virtue of which these sentences are true or false. We call such entities ‘truthmakers’ and contend that those for a wide range of sentences about the real world are moments (dependent particulars). Since moments are unfamiliar, we provide a definition and a brief philosophical history, anchoring them in our ontology by showing that they are objects of perception. The core of our theory is the (...)
    Download  
     
    Export citation  
     
    My bibliography   106 citations  
  4. The Construction of Social Reality: An Exchange.Barry Smith & John Searle - 2003 - American Journal of Economics and Sociology 62 (2):285-309.
    Part 1 of this exchange consists in a critique by Smith of Searle’s The Construction of Social Reality focusing on Searle’s use of the formula ‘X counts as Y in context C’. Smith argues that this formula works well for social objects such as dollar bills and presidents where the corresponding X terms (pieces of paper, human beings) are easy to identify. In cases such as debts and prices and money in a banks computers, however, the formula fails, because these (...)
    Download  
     
    Export citation  
     
    My bibliography   13 citations  
  5. Wüsteria.Barry Smith, Werner Ceusters & Rita Temmerman - 2005 - Studies in Health Technology and Informatics 116:647-652.
    The last two decades have seen considerable efforts directed towards making Electronic Health Records interoperable through improvements in medical ontologies, terminologies and coding systems. Unfortunately, these efforts have been hampered by a number of influential ideas inherited from the work of Eugen Wüster, the father of terminology standardization and the founder of ISO TC 37. We here survey Wüster’s ideas – which see terminology work as being focused on the classification of concepts in people’s minds – and we argue that (...)
    Download  
    Translate
     
     
    Export citation  
     
    My bibliography  
  6. Ontology (Science).Barry Smith - 2003 - In Carola Eschenbach & Michael Grüninger (eds.), Formal Ontology in Information Systems. Oxford: IOS Press. pp. 21-35.
    Increasingly, in data-intensive areas of the life sciences, experimental results are being described in algorithmically useful ways with the help of ontologies. Such ontologies are authored and maintained by scientists to support the retrieval, integration and analysis of their data. The proposition to be defended here is that ontologies of this type – the Gene Ontology (GO) being the most conspicuous example – are a part of science. Initial evidence for the truth of this proposition (which some will find self-evident) (...)
    Download  
     
    Export citation  
     
    My bibliography   8 citations  
  7. Visceral Values: Aurel Kolnai on Disgust.Carolyn Korsmeyer & Barry Smith - 2004 - In Barry Smith & Carolyn Korsmeyer (eds.), Aurel Kolnai's On Disgust. Open Court Publishing Company. pp. 1-23.
    In 1929 when Aurel Kolnai published his essay “On Disgust” in Husserl's ]ahrbuch he could truly assert that disgust was a "sorely neglected" topic. Now, however, this situation is changing as philosophers, psychologists, and historians of culture are turning their attention not only to emotions in general but more specifically to the large and disturbing set of aversive emotions, including disgust. We here provide an account of Kolnai’s contribution to the study of the phenomenon of disgust, of his general theory (...)
    Download  
     
    Export citation  
     
    My bibliography  
  8. In Defense of Truth: Skepticism, Morality, and The Matrix.Barry Smith & J. Erion Gerald - 2002 - In William Irwin (ed.), Philosophy and The Matrix. Chicago: Open Court. pp. 16-27.
    The Matrix exposes us to the uncomfortable worries of philosophical skepticism in an especially compelling way. However, with a bit more reflection, we can see why we need not share the skeptic’s doubts about the existence of the world. Such doubts are appropriate only in the very special context of the philosophical seminar. When we return to normal life we see immediately that they are groundless. Furthermore, we see also the drastic mistake that Cypher commits in turning his back upon (...)
    Download  
     
    Export citation  
     
    My bibliography  
  9. Function, Role and Disposition in Basic Formal Ontology.Robert Arp & Barry Smith - 2008 - Proceedings of Bio-Ontologies Workshop, Intelligent Systems for Molecular Biology (ISMB), Toronto.
    Numerous research groups are now utilizing Basic Formal Ontology as an upper-level framework to assist in the organization and integration of biomedical information. This paper provides elucidation of the three existing BFO subcategories of realizable entity, namely function, role, and disposition. It proposes one further sub-category of tendency, and considers the merits of recognizing two sub-categories of function for domain ontologies, namely, artifactual and biological function. The motivation is to help advance the coherent ontological treatment of functions, roles, and dispositions, (...)
    Download  
     
    Export citation  
     
    My bibliography   3 citations  
  10.  54
    Guidelines for Writing Definitions in Ontologies.Selja Seppälä, Alan Ruttenberg & Barry Smith - 2017 - Ciência da Informação 46 (1): 73-88.
    Ontologies are being used increasingly to promote the reusability of scientific information by allowing heterogeneous data to be integrated under a common, normalized representation. Definitions play a central role in the use of ontologies both by humans and by computers. Textual definitions allow ontologists and data curators to understand the intended meaning of ontology terms and to use these terms in a consistent fashion across contexts. Logical definitions allow machines to check the integrity of ontologies and reason over data annotated (...)
    Download  
     
    Export citation  
     
    My bibliography  
  11. Ontology: Towards a New Synthesis.Barry Smith & Chris Welty - 2001 - In Formal Ontology in Information Systems. New York: ACM Press.
    This introduction to the second international conference on Formal Ontology and Information Systems presents a brief history of ontology as a discipline spanning the boundaries of philosophy and information science. We sketch some of the reasons for the growth of ontology in the information science field, and offer a preliminary stocktaking of how the term ‘ontology’ is currently used. We conclude by suggesting some grounds for optimism as concerns the future collaboration between philosophical ontologists and information scientists.
    Download  
     
    Export citation  
     
    My bibliography   1 citation  
  12. Basic Concepts of Formal Ontology.Barry Smith - 1998 - In Nicola Guarino (ed.), Formal Ontology in Information Systems. IOS Press. pp. 19-28.
    The term ‘formal ontology’ was first used by the philosopher Edmund Husserl in his Logical Investigations to signify the study of those formal structures and relations – above all relations of part and whole – which are exemplified in the subject-matters of the different material sciences. We follow Husserl in presenting the basic concepts of formal ontology as falling into three groups: the theory of part and whole, the theory of dependence, and the theory of boundary, continuity and contact. These (...)
    Download  
     
    Export citation  
     
    My bibliography   2 citations  
  13. Diagnostic Criteria for Temporomandibular Disorders (DC/TMD) for Clinical and Research Applications.Eric Schiffman, Richard Ohrbach, E. Truelove, Edmond Truelove, John Look, Gary Anderson, Werner Ceusters, Barry Smith & Others - 2014 - Journal of Oral and Facial Pain and Headache 28 (1):6-27.
    Aims: The Research Diagnostic Criteria for Temporomandi¬bular Disorders (RDC/TMD) Axis I diagnostic algorithms were demonstrated to be reliable but below target sensitivity and specificity. Empirical data supported Axis I algorithm revisions that were valid. Axis II instruments were shown to be both reliable and valid. An international consensus workshop was convened to obtain recommendations and finalization of new Axis I diagnostic algorithms and new Axis II instruments. Methods: A comprehensive search of published TMD diagnostic literature was followed by review and (...)
    Download  
     
    Export citation  
     
    My bibliography  
  14.  92
    Lógica y ontología formal.Barry Smith - 2004 - In Grupo de Acción Filosófica (GAF). Buenos Aires, Argentina,: Grupo de Acción Filosófica (Gaf), Buenos Aires.
    La lógica es para Husserl una ciencia de la ciencia, una ciencia de lo que todas las ciencias tienen en común respecto de sus modos de validación. De este modo, la lógica trata por un lado con leyes universales relacionadas con la verdad, la deducción, la verificación y la falsación; y, por otro lado, con leyes relacionadas con la teoría como tal, y con lo que produce la unidad teorética. Ambos tipos de leyes se refieren por una parte a las (...)
    Download  
    Translate
     
     
    Export citation  
     
    My bibliography  
  15. The Substitution Theory of Art.Barry Smith - 1985 - Grazer Philosophische Studien 25:533-557.
    In perceptual experience we are directed towards objects in a way which establishes a real relation between a mental act and its target. In reading works of fiction we enjoy experiences which manifest certain internal similarities to such relational acts, but which lack objects. The substitution theory of art attempts to provide a reason why we seek out such experiences and the artifacts which they generate. Briefly, we seek out works of art because we enjoy the physiology and the phenomenology (...)
    Download  
     
    Export citation  
     
    My bibliography  
  16. National Center for Biomedical Ontology: Advancing Biomedicine Through Structured Organization of Scientific Knowledge.Daniel L. Rubin, Suzanna E. Lewis, Chris J. Mungall, Misra Sima, Westerfield Monte, Ashburner Michael, Christopher G. Chute, Ida Sim, Harold Solbrig, M. A. Storey, Barry Smith, John D. Richter, Natasha Noy & Mark A. Musen - 2006 - Omics: A Journal of Integrative Biology 10 (2):185-198.
    The National Center for Biomedical Ontology is a consortium that comprises leading informaticians, biologists, clinicians, and ontologists, funded by the National Institutes of Health (NIH) Roadmap, to develop innovative technology and methods that allow scientists to record, manage, and disseminate biomedical information and knowledge in machine-processable form. The goals of the Center are (1) to help unify the divergent and isolated efforts in ontology development by promoting high quality open-source, standards-based tools to create, manage, and use ontologies, (2) to create (...)
    Download  
     
    Export citation  
     
    My bibliography  
  17. Husserl's Logical Investigations.Kevin Mulligan & Barry Smith - 1986 - Grazer Philosophische Studien 27:199-207.
    The magisterial analyses of logic and meaning advanced in Husserl's Logical Investigations of 1900/01 have for a number of reasons been neglected by analytical philosophers in subsequent decades. This state of affairs has to do, in part, with the history of the editions and translations of Husserl's writings. Findlay's readable but imperfect translation appeared seventy years after the work itself was first published, and the editors and translators and expositors of Husserl's works have reflected the prevailing philosophical atmosphere on the (...)
    Download  
     
    Export citation  
     
    My bibliography   2 citations  
  18.  82
    Ontology and Geographic Objects: An Empirical Study of Cognitive Categorization.David M. Mark, Barry Smith & Barbara Tversky - 1999 - In C. Freksa & David M. Mark (eds.), Spatial Information Theory. Cognitive and Computational Foundations of Geographic Information Science (Lecture Notes in Computer Science 1661). pp. 283-298.
    Cognitive categories in the geographic realm appear to manifest certain special features as contrasted with categories for objects at surveyable scales. We have argued that these features reflect specific ontological characteristics of geographic objects. This paper presents hypotheses as to the nature of the features mentioned, reviews previous empirical work on geographic categories, and presents the results of pilot experiments that used English-speaking subjects to test our hypotheses. Our experiments show geographic categories to be similar to their non-geographic counterparts in (...)
    Download  
     
    Export citation  
     
    My bibliography  
  19. Development of a Manufacturing Ontology for Functionally Graded Materials.Francesco Furini, Rahul Rai, Barry Smith, Georgio Colombo & Venkat Krovi - 2016 - In Proceedings of International Design Engineering Technical Conferences & Computers and Information in Engineering Conference (IDETC/CIE).
    The development of manufacturing technologies for new materials involves the generation of a large and continually evolving volume of information. The analysis, integration and management of such large volumes of data, typically stored in multiple independently developed databases, creates significant challenges for practitioners. There is a critical need especially for open-sharing of data pertaining to engineering design which together with effective decision support tools can enable innovation. We believe that ontology applied to engineering (OE) represents a viable strategy for the (...)
    Download  
     
    Export citation  
     
    My bibliography  
  20.  91
    Urteilstheorien und Sachverhalte.Artur Rojszczak & Barry Smith - 2001 - In Satz Und Sachverhalt. Academia Verlag. pp. 9-72.
    Download  
    Translate
     
     
    Export citation  
     
    My bibliography  
  21.  20
    ImmPort, Toward Repurposing of Open Access Immunological Assay Data for Translational and Clinical Research.Sanchita Bhattacharya, Patrick Dunn, Cristel Thomas, Barry Smith, Henry Schaefer, Jieming Chen, Zicheng Hu, Kelly Zalocusky, Ravi Shankar & Shai Shen-Orr - 2018 - Scientific Data 5:180015.
    Immunology researchers are beginning to explore the possibilities of reproducibility, reuse and secondary analyses of immunology data. Open-access datasets are being applied in the validation of the methods used in the original studies, leveraging studies for meta-analysis, or generating new hypotheses. To promote these goals, the ImmPort data repository was created for the broader research community to explore the wide spectrum of clinical and basic research data and associated findings. The ImmPort ecosystem consists of four components–Private Data, Shared Data, Data (...)
    Download  
     
    Export citation  
     
    My bibliography  
  22.  72
    Malaria Diagnosis and the Plasmodium Life Cycle: The BFO Perspective.Werner Ceusters & Barry Smith - 2010 - In Interdisciplinary Ontology. Proceedings of the Third Interdisciplinary Ontology Meeting. Tokyo: Keio University Press. pp. 25-34.
    Definitive diagnosis of malaria requires the demonstration through laboratory tests of the presence within the patient of malaria parasites or their components. Since malaria parasites can be present even in the absence of malaria manifestations, and since symptoms of malaria can be manifested even in the absence of malaria parasites, malaria diagnosis raises important issues for the adequate understanding of disease, etiology and diagnosis. One approach to the resolution of these issues adopts a realist view, according to which the needed (...)
    Download  
     
    Export citation  
     
    My bibliography  
  23. The Objectivity of Tastes and Tasting.Barry C. Smith - 2007 - In Questions of Taste: the philosophy of wine. Oxford University Press.
    Download  
    Translate
     
     
    Export citation  
     
    My bibliography   6 citations  
  24. Gestalt Theory: An Essay in Philosophy.Barry Smith - 1988 - In Foundations of Gestalt Theory. Vienna: Philosophia Verlag. pp. 11-81.
    The Austrian philosopher Christian von Ehrenfels published his essay "On 'Gestalt Qualities'" in 1890. The essay initiated a current of thought which enjoyed a powerful position in the philosophy and psychology of the first half of this century and has more recently enjoyed a minor resurgence of interest in the area of cognitive science, above all in criticisms of the so-called 'strong programme' in artificial intelligence. The theory of Gestalt is of course associated most specifically with psychologists of the Berlin (...)
    Download  
     
    Export citation  
     
    My bibliography   4 citations  
  25. Promoting Coherent Minimum Reporting Guidelines for Biological and Biomedical Investigations: The MIBBI Project.Chris F. Taylor, Dawn Field, Susanna-Assunta Sansone, Jan Aerts, Rolf Apweiler, Michael Ashburner, Catherine A. Ball, Pierre-Alain Binz, Molly Bogue, Tim Booth, Alvis Brazma, Ryan R. Brinkman, Adam Michael Clark, Eric W. Deutsch, Oliver Fiehn, Jennifer Fostel, Peter Ghazal, Frank Gibson, Tanya Gray, Graeme Grimes, John M. Hancock, Nigel W. Hardy, Henning Hermjakob, Randall K. Julian, Matthew Kane, Carsten Kettner, Christopher Kinsinger, Eugene Kolker, Martin Kuiper, Nicolas Le Novere, Jim Leebens-Mack, Suzanna E. Lewis, Phillip Lord, Ann-Marie Mallon, Nishanth Marthandan, Hiroshi Masuya, Ruth McNally, Alexander Mehrle, Norman Morrison, Sandra Orchard, John Quackenbush, James M. Reecy, Donald G. Robertson, Philippe Rocca-Serra, Henry Rodriguez, Heiko Rosenfelder, Javier Santoyo-Lopez, Richard H. Scheuermann, Daniel Schober, Barry Smith & Jason Snape - 2008 - Nature Biotechnology 26 (8):889-896.
    Throughout the biological and biomedical sciences there is a growing need for, prescriptive ‘minimum information’ (MI) checklists specifying the key information to include when reporting experimental results are beginning to find favor with experimentalists, analysts, publishers and funders alike. Such checklists aim to ensure that methods, data, analyses and results are described to a level sufficient to support the unambiguous interpretation, sophisticated search, reanalysis and experimental corroboration and reuse of data sets, facilitating the extraction of maximum value from data sets (...)
    Download  
     
    Export citation  
     
    My bibliography   3 citations  
  26.  41
    Ontological Imperialism (2000).Barry Smith - manuscript
    Plenary Talk Held at GIScience 2000: First International Conference on Geographic Information Science, Savannah, Georgia.
    Download  
     
    Export citation  
     
    My bibliography  
  27. The Evaluation of Ontologies: Toward Improved Semantic Interoperability.Leo Obrst, Werner Ceusters, Inderjeet Mani, Steve Ray & Barry Smith - 2006 - In Chris Baker & Kei H. Cheung (eds.), Semantic Web: Revolutionizing Knowledge Discovery in the Life Sciences. Springer. pp. 139-158.
    Recent years have seen rapid progress in the development of ontologies as semantic models intended to capture and represent aspects of the real world. There is, however, great variation in the quality of ontologies. If ontologies are to become progressively better in the future, more rigorously developed, and more appropriately compared, then a systematic discipline of ontology evaluation must be created to ensure quality of content and methodology. Systematic methods for ontology evaluation will take into account representation of individual ontologies, (...)
    Download  
     
    Export citation  
     
    My bibliography  
  28.  64
    A Plant Disease Extension of the Infectious Disease Ontology.Ramona Walls, Barry Smith, Elser Justin, Goldfain Albert & W. Stevenson Dennis - 2012 - In Proceeedings of the Third International Conference on Biomedical Ontology (CEUR 897). pp. 1-5.
    Plants from a handful of species provide the primary source of food for all people, yet this source is vulnerable to multiple stressors, such as disease, drought, and nutrient deficiency. With rapid population growth and climate uncertainty, the need to produce crops that can tolerate or resist plant stressors is more crucial than ever. Traditional plant breeding methods may not be sufficient to overcome this challenge, and methods such as highOthroughput sequencing and automated scoring of phenotypes can provide significant new (...)
    Download  
     
    Export citation  
     
    My bibliography  
  29. Mach and Ehrenfels: The Foundations of Gestalt Theory.Kevin Mulligan & Barry Smith - 1988 - In Barry Smith (ed.), Foundations of Gestalt Theory. Vienna: Philosophia Verlag. pp. 124-157.
    Ernst Mach's atomistic theory of sensation faces problems in doing justice to our ability to perceive and remember complex phenomena such as melodies and shapes. Christian von Ehrenfels attempted to solve these problems with his theory of "Gestalt qualities", which he sees as entities depending one-sidedly on the corresponding simple objects of sensation. We explore the theory of dependence relations advanced by Ehrenfels and show how it relates to the views on the objects of perception advanced by Husserl and by (...)
    Download  
     
    Export citation  
     
    My bibliography   3 citations  
  30. Classifying Processes: An Essay in Applied Ontology.Barry Smith - 2012 - Ratio 25 (4):463-488.
    We begin by describing recent developments in the burgeoning discipline of applied ontology, focusing especially on the ways ontologies are providing a means for the consistent representation of scientific data. We then introduce Basic Formal Ontology (BFO), a top-level ontology that is serving as domain-neutral framework for the development of lower level ontologies in many specialist disciplines, above all in biology and medicine. BFO is a bicategorial ontology, embracing both three-dimensionalist (continuant) and four-dimensionalist (occurrent) perspectives within a single framework. We (...)
    Download  
     
    Export citation  
     
    My bibliography   5 citations  
  31. Beyond Concepts: Ontology as Reality Representation.Barry Smith - 2004 - In Achille C. Varzi & Laure Vieu (eds.), Formal Ontology in Information Systems (FOIS). pp. 1-12.
    The present essay is devoted to the application of ontology in support of research in the natural sciences. It defends the thesis that ontologies developed for such purposes should be understood as having as their subject matter, not concepts, but rather the universals and particulars which exist in reality and are captured in scientific laws. We outline the benefits of a view along these lines by showing how it yields rigorous formal definitions of the foundational relations used in many influential (...)
    Download  
     
    Export citation  
     
    My bibliography   3 citations  
  32. Sixteen Days.Barry Smith & Berit Brogaard - 2003 - Journal of Medicine and Philosophy 28 (1):45 – 78.
    When does a human being begin to exist? We argue that it is possible, through a combination of biological fact and philosophical analysis, to provide a definitive answer to this question. We lay down a set of conditions for being a human being, and we determine when, in the course of normal fetal development, these conditions are first satisfied. Issues dealt with along the way include: modes of substance-formation, twinning, the nature of the intra-uterine environment, and the nature of the (...)
    Download  
     
    Export citation  
     
    My bibliography   13 citations  
  33.  60
    A Multi-INT Semantic Reasoning Framework for Intelligence Analysis Support.Janssen Terry, Basik Herbert, Dean Mike & Barry Smith - 2010 - In L. Obrst, Terry Janssen & W. Ceusters (eds.), Ontologies and Semantic Technologies for the Intelligence Community. Amsterdam, The Netherlands: IOS Press. pp. 57-69.
    Lockheed Martin Corp. has funded research to generate a framework and methodology for developing semantic reasoning applications to support the discipline oflntelligence Analysis. This chapter outlines that framework, discusses how it may be used to advance the information sharing and integrated analytic needs of the Intelligence Community, and suggests a system I software architecture for such applications.
    Download  
     
    Export citation  
     
    My bibliography  
  34. Against Fantology.Barry Smith - 2005 - In Johann C. Marek & Maria E. Reicher (eds.), Experience and Analysis. HPT&ÖBV. pp. 153-170.
    The analytical philosophy of the last hundred years has been heavily influenced by a doctrine to the effect that the key to the correct understanding of reality is captured syntactically in the ‘Fa’ (or, in more sophisticated versions, in the ‘Rab’) of standard firstorder predicate logic. Here ‘F’ stands for what is general in reality and ‘a’ for what is individual. Hence “f(a)ntology”. Because predicate logic has exactly two syntactically different kinds of referring expressions—‘F’, ‘G’, ‘R’, etc., and ‘a’, ‘b’, (...)
    Download  
     
    Export citation  
     
    My bibliography   12 citations  
  35. Fiat and Bona Fide Boundaries.Barry Smith & Achille C. Varzi - 2000 - Philosophy and Phenomenological Research 60 (2):401-420.
    There is a basic distinction, in the realm of spatial boundaries, between bona fide boundaries on the one hand, and fiat boundaries on the other. The former are just the physical boundaries of old. The latter are exemplified especially by boundaries induced through human demarcation, for example in the geographic domain. The classical problems connected with the notions of adjacency, contact, separation and division can be resolved in an intuitive way by recognizing this two-sorted ontology of boundaries. Bona fide boundaries (...)
    Download  
     
    Export citation  
     
    My bibliography   12 citations  
  36.  89
    Ontología.Barry Smith - 2007 - In G. Hurtado & O. Nudler (eds.), El mobiliario del mundo: Ensayos de ontología. Mexico City: Universidad Autónoma de México. pp. 47–71.
    Presentiamo qui la traduzione di un lungo saggio sull’ontologia e i sistemi informativi. Abbiamo tradotto la parte più generale con le distinzioni base tra ontologia, metafisica e scienza. L’autore, fornendo un suo punto di vista peculiare sull’ontologia, descrive le diverse questioni e distinzioni connesse all’impresa ontologica, considerando sia il punto di vista dei filosofi che degli informatici.
    Download  
    Translate
     
     
    Export citation  
     
    My bibliography  
  37. Finding Our Way Through Phenotypes.Andrew R. Deans, Suzanna E. Lewis, Eva Huala, Salvatore S. Anzaldo, Michael Ashburner, James P. Balhoff, David C. Blackburn, Judith A. Blake, J. Gordon Burleigh, Bruno Chanet, Laurel D. Cooper, Mélanie Courtot, Sándor Csösz, Hong Cui, Barry Smith & Others - 2015 - PLoS Biol 13 (1):e1002033.
    Despite a large and multifaceted effort to understand the vast landscape of phenotypic data, their current form inhibits productive data analysis. The lack of a community-wide, consensus-based, human- and machine-interpretable language for describing phenotypes and their genomic and environmental contexts is perhaps the most pressing scientific bottleneck to integration across many key fields in biology, including genomics, systems biology, development, medicine, evolution, ecology, and systematics. Here we survey the current phenomics landscape, including data resources and handling, and the progress that (...)
    Download  
     
    Export citation  
     
    My bibliography  
  38. HL7 RIM: An Incoherent Standard.Barry Smith & Werner Ceusters - 2006 - Studies in Health Technology and Informatics 124 (Proceedings of MIE 2006):133–138.
    The Health Level 7 Reference Information Model (HL7 RIM) is lauded by its authors as ‘the foundation of healthcare interoperability’. Yet even after some 10 years of development work, the RIM is still subject to a variety of logical and ontological flaws which have placed severe obstacles in the way of those who are called upon to develop implementations. We offer evidence that these obstacles are insurmountable and that the time has come to abandon an unworkable paradigm.
    Download  
     
    Export citation  
     
    My bibliography  
  39. Fiat Objects.Barry Smith - 2001 - Topoi 20 (2):131-148.
    Human cognitive acts are directed towards entities of a wide range of different types. What follows is a new proposal for bringing order into this typological clutter. A categorial scheme for the objects of human cognition should be (1) critical and realistic. Cognitive subjects are liable to error, even to systematic error of the sort that is manifested by believers in the Pantheon of Olympian gods. Thus not all putative object-directed acts should be recognized as having objects of their own. (...)
    Download  
     
    Export citation  
     
    My bibliography   14 citations  
  40. Functions in Basic Formal Ontology.Andrew Spear, Werner Ceusters & Barry Smith - 2016 - Applied Ontology 11 (2):103-128.
    The notion of function is indispensable to our understanding of distinctions such as that between being broken and being in working order (for artifacts) and between being diseased and being healthy (for organisms). A clear account of the ontology of functions and functioning is thus an important desideratum for any top-level ontology intended for application to domains such as engineering or medicine. The benefit of using top-level ontologies in applied ontology can only be realized when each of the categories identified (...)
    Download  
     
    Export citation  
     
    My bibliography  
  41.  46
    The Development of Non-Coding RNA Ontology.Jingshan Huang, Karen Eilbeck, Barry Smith, Judith Blake, Deijing Dou, Weili Huang, Darren Natale, Alan Ruttenberg, Jun Huan, Michael Zimmermann, Guoqian Jiang, Yu Lin, Bin Wu, Harrison Strachan, Nisansa de Silva & Mohan Vamsi Kasukurthi - 2016 - International Journal of Data Mining and Bioinformatics 15 (3):214--232.
    Identification of non-coding RNAs (ncRNAs) has been significantly improved over the past decade. On the other hand, semantic annotation of ncRNA data is facing critical challenges due to the lack of a comprehensive ontology to serve as common data elements and data exchange standards in the field. We developed the Non-Coding RNA Ontology (NCRO) to handle this situation. By providing a formally defined ncRNA controlled vocabulary, the NCRO aims to fill a specific and highly needed niche in semantic annotation of (...)
    Download  
     
    Export citation  
     
    My bibliography  
  42. Document Acts.Barry Smith - 2014 - In Anita Konzelmann-Ziv & Hans Bernhard Schmid (eds.), Institutions, Emotions, and Group Agents: Contributions to Social Ontology. Springer. pp. 19-31.
    The theory of document acts is an extension of the more traditional theory of speech acts advanced by Austin and Searle. It is designed to do justice to the ways in which documents can be used to bring about a variety of effects in virtue of the fact that, where speech is evanescent, documents are continuant entities. This means that documents can be preserved in such a way that they can be inspected and modified at successive points in time and (...)
    Download  
     
    Export citation  
     
    My bibliography   2 citations  
  43. On Luck, Responsibility and the Meaning of Life.Berit Brogaard & Barry Smith - 2005 - Philosophical Papers 34 (3):443-458.
    A meaningful life, we shall argue, is a life upon which a certain sort of valuable pattern has been imposed by the person in question?a pattern which involves in serious ways the person having an effect upon the world. Meaningfulness is thus a special kind of value which a human life can bear. Two interrelated difficulties face ths proposal. One concerns responsiblity: how are we to account for the fact that a life that satisfies the above criteria can have more (...)
    Download  
     
    Export citation  
     
    My bibliography   5 citations  
  44.  23
    Ontology.Barry Smith - 2003 - In Luciano Floridi (ed.), Blackwell Guide to the Philosophy of Computing and Information. Oxford: Blackwell. pp. 155-166.
    Ontology as a branch of philosophy is the science of what is, of the kinds and structures of objects, properties, events, processes and relations in every area of reality. ‘Ontology’ in this sense is often used by philosophers as a synonym of ‘metaphysics’ (a label meaning literally: ‘what comes after the Physics’), a term used by early students of Aristotle to refer to what Aristotle himself called ‘first philosophy’. But in recent years, in a development hardly noticed by philosophers, the (...)
    Download  
     
    Export citation  
     
    My bibliography  
  45. Integration of Intelligence Data Through Semantic Enhancement.David Salmen, Tatiana Malyuta, Alan Hansen, Shaun Cronen & Barry Smith - 2011 - In Proceedings of the Conference on Semantic Technology in Intelligence, Defense and Security (STIDS). CEUR, Vol. 808.
    We describe a strategy for integration of data that is based on the idea of semantic enhancement. The strategy promises a number of benefits: it can be applied incrementally; it creates minimal barriers to the incorporation of new data into the semantically enhanced system; it preserves the existing data (including any existing data-semantics) in their original form (thus all provenance information is retained, and no heavy preprocessing is required); and it embraces the full spectrum of data sources, types, models, and (...)
    Download  
    Translate
     
     
    Export citation  
     
    My bibliography  
  46. Franz Brentano on the Ontology of Mind.Kevin Mulligan & Barry Smith - 1985 - Philosophy and Phenomenological Research 45 (4):627-644.
    This is a review article on Franz Brentano’s Descriptive Psychology published in 1982. We provide a detailed exposition of Brentano’s work on this topic, focusing on the unity of consciousness, the modes of connection and the types of part, including separable parts, distinctive parts, logical parts and what Brentano calls modificational quasi-parts. We also deal with Brentano’s account of the objects of sensation and the experience of time.
    Download  
     
    Export citation  
     
    My bibliography   5 citations  
  47. On Substances, Accidents and Universals: In Defence of a Constituent Ontology.Barry Smith - 1997 - Philosophical Papers 26 (1):105-127.
    The essay constructs an ontological theory designed to capture the categories instantiated in those portions or levels of reality which are captured in our common sense conceptual scheme. It takes as its starting point an Aristotelian ontology of “substances” and “accidents”, which are treated via the instruments of mereology and topology. The theory recognizes not only individual parts of substances and accidents, including the internal and external boundaries of these, but also universal parts, such as the “humanity” which is an (...)
    Download  
     
    Export citation  
     
    My bibliography   7 citations  
  48. Aristotle, Menger, Mises: An Essay in the Metaphysics of Economics.Barry Smith - 1990 - History of Political Economy, Annual Supplement 22:263-288.
    There are, familiarly, a range of distinct and competing accounts of the methodological underpinnings of Menger' s work. These include Leibnizian, Kantian, Millian, and even Popperian readings; but they include also readings of an Aristotelian sort, and I have myself made a number of contributions in clarification and defence of the latter. Not only, I have argued, does the historical situation in which Menger found himself point to the inevitability of the Aristotelian reading; this reading fits also very naturally to (...)
    Download  
     
    Export citation  
     
    My bibliography   2 citations  
  49.  89
    Definitions in Ontologies.Selja Seppälä, Alan Ruttenberg, Yonatan Schreiber & Barry Smith - 2016 - Cahiers de Lexicologie 109 (2):175‐207.
    Definitions vary according to context of use and target audience. They must be made relevant for each context to fulfill their cognitive and linguistic goals. This involves adapting their logical structure, type of content, and form to each context of use. We examine from these perspectives the case of definitions in ontologies.
    Download  
     
    Export citation  
     
    My bibliography  
  50.  30
    Palaeontological Reflections on the Tractatus.Barry Smith - manuscript
    A collection of fragmentary discussions of possible influences on Wittgenstein when he was writing the Tractatus, includes Reinach and Meinong.
    Download  
     
    Export citation  
     
    My bibliography  
1 — 50 / 392