Quantum entanglement lies at the foundation of quantum mechanics. Witness Schrödinger highlighting entanglement with his puzzling cat thought experiment and Einstein deriding it as “spooky action at a distance.” Nonetheless, quantum entanglement has been verified experimentally and is essential for quantum information and quantum computing. The quantum superposition principle, together with entanglement, dramatically contrasts the quantum from the classical description of reality. We attempt to integrate physical reality with a Christian worldview.

The origin and prevalence of transposable elements may best be understood as resulting from “selfish” evolutionary processes at the within-genome level, with relevant populations being all members of the same TE family or all potentially mobile DNAs in a species. But the maintenance of families of TEs as evolutionary drivers, if taken as a consequence of selection, might be better understood as a consequence of selection at the level of species or higher, with the relevant populations being species or ecosystems (...) varying in their possession of TEs. In 2015, Brunet and Doolittle made the case for legitimizing claims for an evolutionary role for TEs by recasting such claims as being about species selection. Here I further develop this “how possibly” argument. I note that with a forgivingly broad construal of evolution by natural selection we might come to appreciate many aspects of Life on earth as its products, and TEs as—possibly—contributors to the success of Life by selection at several levels of a biological hierarchy. Thinking broadly makes this proposition a testable Darwinian one. (shrink)

The current spread of coronavirus has caught our modern world by surprise, which leads to widespread panic, fear and confusion. However, if we view the unfolding of these events from a scientific historical perspective of past human evolution, we may discover the reoccurring patterns of the environmental conditions that give rise to such epidemics. Hence, we can figure out better methods to prepare and react to the infectious agents that spread diseases that have shaped the course of human history before. (...) Here, I propose a holistic view of human evolution, with an interdisciplinary approach that studies how cyclic variation in solar UV energy affects the evolution of viruses and shapes the symbiotic dynamics of human life on earth. (shrink)

This article proposes that cancers can be initiated by retrotransposon (RTN) activation through changes in the transcriptional regulation of nearby genes. I first detail the hypothesis and then discuss the nature of physiological stress(es) in RTN activation; the role of DNA demethylation in the initiation and propagation of new RTN states; the connection between ageing and cancer incidence and the involvement of activated RTNs in the chromosomal aberrations that feature in cancer progression. The hypothesis neither replaces nor invalidates other theories (...) of cancer, in particular the somatic mutation theory, but helps clarify and unify much of the hitherto poorly integrated, complex phenomenology of cancer. (shrink)

Theories of the genetics underlying punctuated equilibrium (PE) have been vague to date. Here the developmental gene hypothesis is proposed, which states that: 1) developmental regulatory (DevReg) genes are responsible for the orchestration of metazoan morphogenesis and their extreme conservation and mutation intolerance generates the equilibrium or stasis present throughout much of the fossil record and 2) the accumulation of regulatory elements and recombination within these same genes—often derived from transposable elements—drives punctuated bursts of morphological divergence and speciation across metazoa. (...) This two‐part hypothesis helps to explain the features that characterize PE, providing a theoretical genetic basis for the once‐controversial theory. Also see the video abstract here https://youtu.be/C-fu-ks5yDs. (shrink)