This paper introduces a class of graphical independence models that is closed under marginalization and conditioning but that contains all DAG independence models. This class of graphs, called maximal ancestral graphs, has two attractive features: there is at most one edge between each pair of vertices; every missing edge corresponds to an independence relation. These features lead to a simple parameterization of the corresponding set of distributions in the Gaussian case.

S There is a long tradition of representing causal relationships by directed acyclic graphs (Wright, 1934 ). Spirtes ( 1994), Spirtes et al. ( 1993) and Pearl & Verma ( 1991) describe procedures for inferring the presence or absence of causal arrows in the graph even if there might be unobserved confounding variables, and/or an unknown time order, and that under weak conditions, for certain combinations of directed acyclic graphs and probability distributions, are asymptotically, in sample size, consistent. These results (...) are surprising since they seem to contradict the standard statistical wisdom that consistent estimators of causal effects do not exist for nonrandomised studies if there are potentially unobserved confounding variables. We resolve the apparent incompatibility of these views by closely examining the asymptotic properties of these causal inference procedures. We show that the asymptotically consistent procedures are ‘pointwise consistent’, but ‘uniformly consistent’ tests do not exist. Thus, no finite sample size can ever be guaranteed to approximate the asymptotic results. We also show the nonexistence of valid, consistent confidence intervals for causal effects and the nonexistence of uniformly consistent point estimators. Our results make no assumption about the form of the tests or estimators. In particular, the tests could be classical independence tests, they could be Bayes tests or they could be tests based on scoring methods such as  or . The implications of our results for observational studies are controversial and are discussed briefly in the last section of the paper. The results hinge on the following fact: it is possible to find, for each sample size n, distributions P and Q such that P and Q are empirically indistinguishable and yet P and Q correspond to different causal effects. (shrink)

Explaining the connection, if any, between simplicity and truth is among the deepest problems facing the philosophy of science, statistics, and machine learning. Say that an efficient truth finding method minimizes worst case costs en route to converging to the true answer to a theory choice problem. Let the costs considered include the number of times a false answer is selected, the number of times opinion is reversed, and the times at which the reversals occur. It is demonstrated that (1) (...) always choosing the simplest theory compatible with experience, and (2) hanging onto it while it remains simplest, is both necessary and sufficient for efficiency. †To contact the author, please write to: Department of Philosophy, Carnegie Mellon University, Baker Hall 135, Pittsburgh, PA 15213-3890; e-mail: [email protected]. (shrink)

Theoretical Computer Science, 383: 270-289, 2007.

A fundamental question in causal inference is whether it is possible to reliably infer the manipulation effects from observational data. There are a variety of senses of asymptotic reliability in the statistical literature, among which the most commonly discussed frequentist notions are pointwise consistency and uniform consistency (see, e.g. Bickel, Doksum [2001]). Uniform consistency is in general preferred to pointwise consistency because the former allows us to control the worst case error bounds with a finite sample size. In the sense (...) of pointwise consistency, several reliable causal inference algorithms have been established under the Markov and Faithfulness assumptions [Pearl 2000, Spirtes et al. 2001]. In the sense of uniform consistency, however, reliable causal inference is impossible under the two assumptions when time order is unknown and/or latent confounders are present [Robins et al. 2000]. In this paper we present two natural generalizations of the Faithfulness assumption in the context of structural equation models, under which we show that the typical algorithms in the literature are uniformly consistent with or without modifications even when the time order is unknown. We also discuss the situation where latent confounders may be present and the sense in which the Faithfulness assumption is a limiting case of the stronger assumptions. (shrink)

Simplicity has long been recognized as an apparent mark of truth in science, but it is difficult to explain why simplicity should be accorded such weight. This chapter examines some standard, statistical explanations of the role of simplicity in scientific method and argues that none of them explains, without circularity, how a reliance on simplicity could be conducive to finding true models or theories. The discussion then turns to a less familiar approach that does explain, in a sense, the elusive (...) connection between simplicity and truth. The idea is that simplicity does not point at or reliably indicate the truth but, rather, keeps inquiry on the cognitively most direct path to the truth. (shrink)

Most causal discovery algorithms in the literature exploit an assumption usually referred to as the Causal Faithfulness or Stability Condition. In this paper, we highlight two components of the condition used in constraint-based algorithms, which we call “Adjacency-Faithfulness” and “Orientation- Faithfulness.” We point out that assuming Adjacency-Faithfulness is true, it is possible to test the validity of Orientation- Faithfulness. Motivated by this observation, we explore the consequence of making only the Adjacency-Faithfulness assumption. We show that the familiar PC algorithm has (...) to be modified to be correct under the weaker, Adjacency-Faithfulness assumption. The modified algorithm, called Conservative PC (CPC), checks whether Orientation- Faithfulness holds in the orientation phase, and if not, avoids drawing certain causal conclusions the PC algorithm would draw. Howtion: ever, if the stronger, standard causal Faith-. (shrink)

Chris Meek. Strong-Completeness and Faithfulness in Belief Networks.