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  1. The Structure of Autocatalytic Sets: Evolvability, Enablement, and Emergence.Wim Hordijk, Mike Steel & Stuart Kauffman - 2012 - Acta Biotheoretica 60 (4):379-392.
    This paper presents new results from a detailed study of the structure of autocatalytic sets. We show how autocatalytic sets can be decomposed into smaller autocatalytic subsets, and how these subsets can be identified and classified. We then argue how this has important consequences for the evolvability, enablement, and emergence of autocatalytic sets. We end with some speculation on how all this might lead to a generalized theory of autocatalytic sets, which could possibly be applied to entire ecologies or even (...)
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  • Monist and Pluralist Approaches on Underdetermination: A Case Study in Evolutionary Microbiology.Thomas Bonnin - 2020 - Journal for General Philosophy of Science / Zeitschrift für Allgemeine Wissenschaftstheorie 52 (1):135-155.
    Philosophers have usually highlighted how the weakness and paucity of historical evidence underdetermine the choice between rival historical explanations. Focusing underdetermination on the link between theory and evidence comes, I argue, with three assumptions: competing hypotheses are easy to generate, investigators agree on the constitution and interpretation of the evidence and a plurality of hypotheses is a useful evil to reach consensus. The last assumption implies that the sustained coexistence of incompatible hypotheses is considered as a scientific failure. I argue (...)
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  • The Cell and Protoplasm as Container, Object, and Substance, 1835–1861.Daniel Liu - 2017 - Journal of the History of Biology 50 (4):889-925.
    (Recipient of the 2020 Everett Mendelsohn Prize.) This article revisits the development of the protoplasm concept as it originally arose from critiques of the cell theory, and examines how the term “protoplasm” transformed from a botanical term of art in the 1840s to the so-called “living substance” and “the physical basis of life” two decades later. I show that there were two major shifts in biological materialism that needed to occur before protoplasm theory could be elevated to have equal status (...)
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  • What Makes Biology Unique? Considerations on the Autonomy of a Scientific Discipline.Ernst Mayr - 2005 - Journal of the History of Biology 38 (3):609-614.
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  • Teleology and its constitutive role for biology as the science of organized systems in nature.Georg Toepfer - 2012 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 43 (1):113-119.
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  • The Idea of Teleology.Ernst Mayr - 1992 - Journal of the History of Ideas 53 (1):117-135.
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  • Life without definitions.Carol E. Cleland - 2012 - Synthese 185 (1):125-144.
    The question ‘what is life?’ has long been a source of philosophical debate and in recent years has taken on increasing scientific importance. The most popular approach among both philosophers and scientists for answering this question is to provide a “definition” of life. In this article I explore a variety of different definitional approaches, both traditional and non-traditional, that have been used to “define” life. I argue that all of them are deeply flawed. It is my contention that a scientifically (...)
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  • Can Biological Teleology Be Naturalized?Mark Bedau - 1991 - Journal of Philosophy 88 (11):647-655.
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  • Origin of Life.A. I. Oparin & S. Morgulis - 1956 - British Journal for the Philosophy of Science 6 (24):341-343.
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  • The Protoplasmic Theory of Life and the Vitalist-Mechanist Debat.Gerald Nelson - 1969 - Isis 60:272-292.
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  • The Protoplasmic Theory of Life and the Vitalist-Mechanist Debate.Gerald L. Geison - 1969 - Isis 60 (3):273-292.
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