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  1. Biomedical Ontologies.Barry Smith - 2022 - In Peter L. Elkin (ed.), Terminology, Ontology and Their Implementations: Teaching Guide and Notes. Springer. pp. 125-169.
    We begin at the beginning, with an outline of Aristotle’s views on ontology and with a discussion of the influence of these views on Linnaeus. We move from there to consider the data standardization initiatives launched in the 19th century, and then turn to investigate how the idea of computational ontologies developed in the AI and knowledge representation communities in the closing decades of the 20th century. We show how aspects of this idea, particularly those relating to the use of (...)
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  • Natural necessity: An introductory guide for ontologists.Fumiaki Toyoshima - 2020 - Applied ontology 15 (1):61-89.
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  • Affordances and their ontological core.Fumiaki Toyoshima, Adrien Barton & Jean-François Ethier - 2022 - Applied ontology 17 (2):285-320.
    The notion of affordance remains elusive, notwithstanding its importance for the representation of agency, cognition, and behaviors. This paper lays down a foundation for an ontology of affordances by elaborating the idea of “core affordance” which would serve as a common ground for explaining existing diverse conceptions of affordances and their interrelationships. For this purpose, it analyzes M. T. Turvey’s dispositional theory of affordances in light of a formal ontology of dispositions. Consequently, two kinds of so-called “core affordances” are proposed: (...)
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  • ROMAIN: Towards a BFO compliant reference ontology for industrial maintenance.Mohamed Hedi Karray, Farhad Ameri, Melinda Hodkiewicz & Thierry Louge - 2019 - Applied ontology 14 (2):155-177.
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  • Roles and their three facets: A foundational perspective.Fumiaki Toyoshima - 2021 - Applied ontology 16 (2):161-192.
    Roles remain nebulous entities, notwithstanding their extensive interdisciplinary research. This paper argues through a meta-ontological conceptual tool of grounding that there are three key facets of roles: a role position, a role specification, and a role potential. A foundational perspective on roles can be specified by “role choices” as to which facet of roles is primary. Role choices are illustrated with theories of roles that are built in compliance with four well-known upper ontologies: GFO, DOLCE, BFO, and UFO. The relationship (...)
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