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  1. Non-equilibrium thermodynamics and the free energy principle in biology.Matteo Colombo & Patricia Palacios - 2021 - Biology and Philosophy 36 (5):1-26.
    According to the free energy principle, life is an “inevitable and emergent property of any random dynamical system at non-equilibrium steady state that possesses a Markov blanket” :20130475, 2013). Formulating a principle for the life sciences in terms of concepts from statistical physics, such as random dynamical system, non-equilibrium steady state and ergodicity, places substantial constraints on the theoretical and empirical study of biological systems. Thus far, however, the physics foundations of the free energy principle have received hardly any attention. (...)
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  • Political Intimacy and Self-Governance in the Dialogues of Confucius: An Exploratory Study on the Philosophical Potential of the Kongzi Jia Yu.Brian Bruya - forthcoming - Dao: A Journal of Comparative Philosophy:1-27.
    The Dialogues of Confucius (Kongzi Jia Yu 孔子家語) is an unexplored resource for the philosophy of Confucius. In this article, I make a first attempt at mining its riches. Focusing on Chapters 21 and 32, I reconstruct a multilevel theory of governing that is a cyclic process proceeding from the moral psychology of the individual to social organization, to the society as grounded in natural processes, and to the metaphysics of the natural processes themselves, thus adumbrating a metaphysics of morals (...)
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  • Genidentity and Biological Processes.Thomas Pradeu - 2018 - In Daniel J. Nicholson & John Dupré (eds.), Everything Flows: Towards a Processual Philosophy of Biology. Oxford, United Kingdom: Oxford University Press.
    A crucial question for a process view of life is how to identify a process and how to follow it through time. The genidentity view can contribute decisively to this project. It says that the identity through time of an entity X is given by a well-identified series of continuous states of affairs. Genidentity helps address the problem of diachronic identity in the living world. This chapter describes the centrality of the concept of genidentity for David Hull and proposes an (...)
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  • Reconceptualizing the Organism: From Complex Machine to Flowing Stream.Daniel J. Nicholson - 2018 - In Daniel J. Nicholson & John Dupré (eds.), Everything Flows: Towards a Processual Philosophy of Biology. Oxford, United Kingdom: Oxford University Press.
    This chapter draws on insights from non-equilibrium thermodynamics to demonstrate the ontological inadequacy of the machine conception of the organism. The thermodynamic character of living systems underlies the importance of metabolism and calls for the adoption of a processual view, exemplified by the Heraclitean metaphor of the stream of life. This alternative conception is explored in its various historical formulations and the extent to which it captures the nature of living systems is examined. Following this, the chapter considers the metaphysical (...)
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  • The New Mechanical Philosophy.Stuart Glennan - 2017 - Oxford: Oxford University Press.
    This volume argues for a new image of science that understands both natural and social phenomena to be the product of mechanisms, casting the work of science as an effort to understand those mechanisms. Glennan offers an account of the nature of mechanisms and of the models used to represent them in physical, life, and social sciences.
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  • Theoretical ecology as etiological from the start.Justin Donhauser - 2016 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 60:67-76.
    The world’s leading environmental advisory institutions look to ecological theory and research as an objective guide for policy and resource management decision-making. In addition to various theoretical merits of doing so, it is therefore crucially important to clear up confusions about ecology’s conceptual foundations and to make plain the basic workings of inferential methods used in the science. Through discussion of key moments in the genesis of the theoretical branch of ecology, this essay elucidates a general heuristic role of teleological (...)
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  • Epigenesis by experience: Romantic empiricism and non-Kantian biology.Amanda Jo Goldstein - 2017 - History and Philosophy of the Life Sciences 40 (1):13.
    Reconstructions of Romantic-era life science in general, and epigenesis in particular, frequently take the Kantian logic of autotelic “self-organization” as their primary reference point. I argue in this essay that the Kantian conceptual rubric hinders our historical and theoretical understanding of epigenesis, Romantic and otherwise. Neither a neutral gloss on epigenesis, nor separable from the epistemological deflation of biological knowledge that has received intensive scrutiny in the history and philosophy of science, Kant’s heuristics of autonomous “self-organization” in the third Critique (...)
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  • Epigenesis by experience: Romantic empiricism and non-Kantian biology.Amanda Jo Goldstein - 2018 - History and Philosophy of the Life Sciences 40 (1):1-27.
    Reconstructions of Romantic-era life science in general, and epigenesis in particular, frequently take the Kantian logic of autotelic “self-organization” as their primary reference point. I argue in this essay that the Kantian conceptual rubric hinders our historical and theoretical understanding of epigenesis, Romantic and otherwise. Neither a neutral gloss on epigenesis, nor separable from the epistemological deflation of biological knowledge that has received intensive scrutiny in the history and philosophy of science, Kant’s heuristics of autonomous “self-organization” in the third Critique (...)
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  • Teleology and the organism: Kant's controversial legacy for contemporary biology.Andrea Gambarotto & Auguste Nahas - 2022 - Studies in History and Philosophy of Science Part A 93 (C):47-56.
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  • Five lessons from teleology-neutrality and metaphor in ecology: bottom-up and top-down all at once.Justin Donhauser - 2023 - Synthese 201 (3):1-17.
    This paper illuminates primary epistemic functions of teleological characterizations in ecology through discussion of the historical and conceptual origins of the theoretical branch of ecology (§§1–2). I subsequently defuse enduring confusions about the use of teleological characterizations in ecology; with a focus on recent critical arguments by Sagoff in this journal (Sagoff, Synthese 193:3003–3024, 2016) and some other places (e.g., his Sagoff, Ethics, Policy, and Environment 16:239–257, 2013 and Sagoff, Studies in History and Philosophy of Science Part C, 2017) (§3). (...)
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  • Auto-organización y autopoiesis.Arantza Etxeberria & Leonardo Bich - 2017 - Diccionario Interdisciplinar Austral.
    El prefijo “auto” en autoorganización y autopoiesis se refiere a la existencia de una identidad o agencialidad implicada en el orden, organización o producción de un sistema que se corresponde con el sistema mismo, en contraste con el diseño o la influencia de carácter externo. La autoorganización (AO) estudia la manera en la que los procesos de un sistema alcanzan de forma espontánea un orden u organización complejo, bien como una estructura o patrón emergente, bien como algún tipo de finalidad (...)
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