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  1. Prediction via Similarity: Biomedical Big Data and the Case of Cancer Models.Giovanni Valente, Giovanni Boniolo & Fabio Boniolo - 2023 - Philosophy and Technology 36 (1):1-20.
    In recent years, the biomedical field has witnessed the emergence of novel tools and modelling techniques driven by the rise of the so-called Big Data. In this paper, we address the issue of predictability in biomedical Big Data models of cancer patients, with the aim of determining the extent to which computationally driven predictions can be implemented by medical doctors in their clinical practice. We show that for a specific class of approaches, called k-Nearest Neighbour algorithms, the ability to draw (...)
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  • Follow *the* science? On the marginal role of the social sciences in the COVID-19 pandemic.Simon Lohse & Stefano Canali - 2021 - European Journal for Philosophy of Science 11 (4):1-28.
    In this paper, we use the case of the COVID-19 pandemic in Europe to address the question of what kind of knowledge we should incorporate into public health policy. We show that policy-making during the COVID-19 pandemic has been biomedicine-centric in that its evidential basis marginalised input from non-biomedical disciplines. We then argue that in particular the social sciences could contribute essential expertise and evidence to public health policy in times of biomedical emergencies and that we should thus strive for (...)
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  • Simulated Data in Empirical Science.Aki Lehtinen & Jani Raerinne - forthcoming - Foundations of Science:1-22.
    This paper provides the first systematic epistemological account of simulated data in empirical science. We focus on the epistemic issues modelers face when they generate simulated data to solve problems with empirical datasets, research tools, or experiments. We argue that for simulated data to count as epistemically reliable, a simulation model does not have to mimic its target. Instead, some models take empirical data as a target, and simulated data may successfully mimic such a target even if the model does (...)
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  • Evaluating community science.Karen Kovaka - 2021 - Studies in History and Philosophy of Science Part A 88 (C):102-109.
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  • The Evidence for the accelerating universe: endorsement and robust consistency.Genco Guralp - 2020 - European Journal for Philosophy of Science 10 (2):1-52.
    The 2011 Nobel Prize in Physics was awarded to researchers from the Supernova Cosmology Project and the High-z Supernova Search Team for the discovery of the accelerating expansion of the universe. In this paper, I provide a historical analysis of the supernova cosmology evidence put forward by these teams for the accelerating universe, in terms of an iterative model of scientific progress developed by Hasok Chang in the context of his study of the development of measurement standards. I argue, using (...)
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  • The role of replication in psychological science.Samuel C. Fletcher - 2021 - European Journal for Philosophy of Science 11 (1):1-19.
    The replication or reproducibility crisis in psychological science has renewed attention to philosophical aspects of its methodology. I provide herein a new, functional account of the role of replication in a scientific discipline: to undercut the underdetermination of scientific hypotheses from data, typically by hypotheses that connect data with phenomena. These include hypotheses that concern sampling error, experimental control, and operationalization. How a scientific hypothesis could be underdetermined in one of these ways depends on a scientific discipline’s epistemic goals, theoretical (...)
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  • Arche-writing and data-production in theory-oriented scientific practice: the case of free-viewing as experimental system to test the temporal correlation hypothesis.Juan Felipe Espinosa Cristia, Carla Fardella & Juan Manuel Garrido Wainer - 2021 - History and Philosophy of the Life Sciences 43 (2):1-27.
    Data production in experimental sciences depends on localised experimental systems, but the epistemic properties of data transcend the contingencies of the processes that produce them. Philosophers often believe that experimental systems instantiate but do not produce the epistemic properties of data. In this paper, we argue that experimental systems' local functioning entails intrinsic capacities to produce the epistemic properties of data. We develop this idea by applying Derrida's model of arche-writing to study a case of theory-oriented experimental practice. Derrida's model (...)
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  • Colligation in modelling practices: From Whewell’s tides to the San Francisco Bay Model.Claudia Cristalli & Julia Sánchez-Dorado - 2021 - Studies in History and Philosophy of Science Part A 85:1-15.
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  • Epistemological and educational issues in teaching practice-oriented scientific research: roles for philosophers of science.Mieke Boon, Mariana Orozco & Kishore Sivakumar - 2022 - European Journal for Philosophy of Science 12 (1):1-23.
    The complex societal challenges of the twenty-first Century require scientific researchers and academically educated professionals capable of conducting scientific research in complex problem contexts. Our central claim is that educational approaches inspired by a traditional empiricist epistemology insufficiently foster the required deep conceptual understanding and higher-order thinking skills necessary for epistemic tasks in scientific research. Conversely, we argue that constructivist epistemologies provide better guidance to educational approaches to promote research skills. We also argue that teachers adopting a constructivist learning theory (...)
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  • Data models, representation and adequacy-for-purpose.Alisa Bokulich & Wendy Parker - 2021 - European Journal for Philosophy of Science 11 (1):1-26.
    We critically engage two traditional views of scientific data and outline a novel philosophical view that we call the pragmatic-representational view of data. On the PR view, data are representations that are the product of a process of inquiry, and they should be evaluated in terms of their adequacy or fitness for particular purposes. Some important implications of the PR view for data assessment, related to misrepresentation, context-sensitivity, and complementary use, are highlighted. The PR view provides insight into the common (...)
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  • Two Dimensions of Opacity and the Deep Learning Predicament.Florian J. Boge - 2021 - Minds and Machines 32 (1):43-75.
    Deep neural networks have become increasingly successful in applications from biology to cosmology to social science. Trained DNNs, moreover, correspond to models that ideally allow the prediction of new phenomena. Building in part on the literature on ‘eXplainable AI’, I here argue that these models are instrumental in a sense that makes them non-explanatory, and that their automated generation is opaque in a unique way. This combination implies the possibility of an unprecedented gap between discovery and explanation: When unsupervised models (...)
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  • What is a data model?: An anatomy of data analysis in high energy physics.Antonis Antoniou - 2021 - European Journal for Philosophy of Science 11 (4):1-33.
    Many decades ago Patrick Suppes argued rather convincingly that theoretical hypotheses are not confronted with the direct, raw results of an experiment, rather, they are typically compared with models of data. What exactly is a data model however? And how do the interactions of particles at the subatomic scale give rise to the huge volumes of data that are then moulded into a polished data model? The aim of this paper is to answer these questions by presenting a detailed case (...)
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  • Radiocarbon Dating in Archaeology: Triangulation and Traceability.Alison Wylie - 2020 - In Sabina Leonelli & Niccolò Tempini (eds.), Data Journeys in the Sciences. Springer. pp. 285-301.
    When radiocarbon dating techniques were applied to archaeological material in the 1950s they were hailed as a revolution. At last archaeologists could construct absolute chronologies anchored in temporal data backed by immutable laws of physics. This would make it possible to mobilize archaeological data across regions and time-periods on a global scale, rendering obsolete the local and relative chronologies on which archaeologists had long relied. As profound as the impact of 14C dating has been, it has had a long and (...)
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