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  1. Social norms and superorganisms.Rachell Powell - 2023 - Biology and Philosophy 38 (3):1-25.
    Normativity is widely regarded as the ability to make evaluative judgments based on a shared system of social norms. When normativity is viewed through the cognitively demanding lens of human morality, however, the prospect of finding social norms innonhuman animals rapidly dwindles and common causal structures are overlooked. In this paper, I develop a biofunctionalist account of social normativity and examine its implications for how we ought to conceptualize, explain, and study social norms in the wild. I propose that we (...)
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  • What are the ‘levels’ in levels of selection?Markus Ilkka Eronen & Grant Ramsey - forthcoming - British Journal for the Philosophy of Science.
    The levels of selection debate is generally taken to be a debate about how natural selection can occur at the various levels of biological organization. In this paper, we argue that questions about levels of selection should be analyzed separately from questions about levels of organization. In the deflationary proposal we defend, all that is necessary for multilevel selection is that there are cases in which particles are nested in collectives, and that both the collectives and the particles that compose (...)
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  • Biological Individuals.Robert A. Wilson & Matthew J. Barker - 2024 - Stanford Encyclopedia of Philosophy.
    The impressive variation amongst biological individuals generates many complexities in addressing the simple-sounding question what is a biological individual? A distinction between evolutionary and physiological individuals is useful in thinking about biological individuals, as is attention to the kinds of groups, such as superorganisms and species, that have sometimes been thought of as biological individuals. More fully understanding the conceptual space that biological individuals occupy also involves considering a range of other concepts, such as life, reproduction, and agency. There has (...)
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  • Evolution of multicellularity: cheating done right.Walter Veit - 2019 - Biology and Philosophy 34 (3):34.
    For decades Darwinian processes were framed in the form of the Lewontin conditions: reproduction, variation and differential reproductive success were taken to be sufficient and necessary. Since Buss and the work of Maynard Smith and Szathmary biologists were eager to explain the major transitions from individuals to groups forming new individuals subject to Darwinian mechanisms themselves. Explanations that seek to explain the emergence of a new level of selection, however, cannot employ properties that would already have to exist on that (...)
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  • Levels of Organization in Biology.Markus Eronen & Daniel Stephen Brooks - unknown - Stanford Encyclopedia of Philosophy.
    Levels of organization are structures in nature, usually defined by part-whole relationships, with things at higher levels being composed of things at the next lower level. Typical levels of organization that one finds in the literature include the atomic, molecular, cellular, tissue, organ, organismal, group, population, community, ecosystem, landscape, and biosphere levels. References to levels of organization and related hierarchical depictions of nature are prominent in the life sciences and their philosophical study, and appear not only in introductory textbooks and (...)
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  • Evolution of Individuality: A Case Study in the Volvocine Green Algae.Erik R. Hanschen, Dinah R. Davison, Zachariah I. Grochau-Wright & Richard E. Michod - 2017 - Philosophy, Theory, and Practice in Biology 9 (3).
    All disciplines must define their basic units and core processes. In evolutionary biology, the core process is natural selection and the basic unit of selection and adaptation is the individual. To operationalize the theory of natural selection we must count individuals, as they are the bearers of fitness. While canonical individuals have often been taken to be multicellular organisms, the hierarchy of life shows that new kinds of individuals have evolved. A variety of criteria have been used to define biological (...)
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  • Pathways to pluralism about biological individuality.Beckett Sterner - 2015 - Biology and Philosophy 30 (5):609-628.
    What are the prospects for a monistic view of biological individuality given the multiple epistemic roles the concept must satisfy? In this paper, I examine the epistemic adequacy of two recent accounts based on the capacity to undergo natural selection. One is from Ellen Clarke, and the other is by Peter Godfrey-Smith. Clarke’s position reflects a strong monism, in that she aims to characterize individuality in purely functional terms and refrains from privileging any specific material properties as important in their (...)
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  • Social revolution. [REVIEW]Jonathan Birch - 2012 - Biology and Philosophy 27 (4):571-581.
    Andrew Bourke’s Principles of Social Evolution identifies three stages that characterize an evolutionary transition in individuality and deploys inclusive fitness theory to explain each stage. The third stage, social group transformation, has hitherto received relatively little attention from inclusive fitness theorists. In this review, I first discuss Bourke’s “virtual dominance” hypothesis for the evolution of the germ line. I then contrast Bourke’s inclusive fitness approach to the major transitions with the multi-level approach developed by Richard Michod, Samir Okasha and others. (...)
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  • Levels of Selection Are Artefacts of Different Fitness Temporal Measures.Pierrick Bourrat - 2015 - Ratio 28 (1):40-50.
    In this paper I argue against the claim, recently put forward by some philosophers of biology and evolutionary biologists, that there can be two or more ontologically distinct levels of selection. I show by comparing the fitness of individuals with that of collectives of individuals in the same environment and over the same period of time – as required to decide if one or more levels of selection is acting in a population – that the selection of collectives is a (...)
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  • (1 other version)Immunity and the Emergence of Individuality.Thomas Pradeu - 2013 - In Frédéric Bouchard & Philippe Huneman (eds.), From Groups to Individuals: Evolution and Emerging Individuality. Cambridge, Massachusetts: MIT Press. pp. 77.
    Since, it has become clear that individuality is not to be considered as a given, but rather as something which needs to be explained. How has individuality emerged through evolution, and how has it subsequently been maintained? In particular, why is it that multicellular organisms appeared and persisted, despite the obvious interest of each cell of favoring its own replication? Several biologists see the immune system as one of the key components for explaining the maintenance of multicellular organisms’ individuality. Indeed, (...)
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  • The Relation between Kin and Multilevel Selection: An Approach Using Causal Graphs.Samir Okasha - 2016 - British Journal for the Philosophy of Science 67 (2):435-470.
    Kin selection and multilevel selection are alternative approaches for studying the evolution of social behaviour, the relation between which has long been a source of controversy. Many recent theorists regard the two approaches as ultimately equivalent, on the grounds that gene frequency change can be correctly expressed using either. However, this shows only that the two are formally equivalent, not that they offer equally good causal representations of the evolutionary process. This article articulates the notion of an ‘adequate causal representation’ (...)
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  • Emergence and adaptation.Philippe Huneman - 2008 - Minds and Machines 18 (4):493-520.
    I investigate the relationship between adaptation, as defined in evolutionary theory through natural selection, and the concept of emergence. I argue that there is an essential correlation between the former, and “emergence” defined in the field of algorithmic simulations. I first show that the computational concept of emergence (in terms of incompressible simulation) can be correlated with a causal criterion of emergence (in terms of the specificity of the explanation of global patterns). On this ground, I argue that emergence in (...)
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  • Beyond congruence: evidential integration and inferring the best evolutionary scenario.Arsham Nejad Kourki - 2022 - Biology and Philosophy 37 (5):1-25.
    Molecular methods have revolutionised virtually every area of biology, and metazoan phylogenetics is no exception: molecular phylogenies, molecular clocks, comparative phylogenomics, and developmental genetics have generated a plethora of molecular data spanning numerous taxa and collectively transformed our understanding of the evolutionary history of animals, often corroborating but at times opposing results of more traditional approaches. Moreover, the diversity of methods and models within molecular phylogenetics has resulted in significant disagreement among molecular phylogenies as well as between these and earlier (...)
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  • The relativity of Darwinian populations and the ecology of endosymbiosis.Adrian Stencel - 2016 - Biology and Philosophy 31 (5):619-637.
    If there is a single discipline of science calling the basic concepts of biology into question, it is without doubt microbiology. Indeed, developments in microbiology have recently forced us to rethink such fundamental concepts as the organism, individual, and genome. In this paper I show how microorganisms are changing our understanding of natural aggregations and develop the concept of a Darwinian population to embrace these discoveries. I start by showing that it is hard to set the boundaries of a Darwinian (...)
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  • The Symbiotic Phenomenon in the Evolutive Context.Francisco Carrapiço - 2012 - In Torres Juan, Pombo Olga, Symons John & Rahman Shahid (eds.), Special sciences and the Unity of Science. Springer. pp. 113--119.
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  • What are the major transitions?Matthew D. Herron - 2021 - Biology and Philosophy 36 (1):1-19.
    The ‘Major Transitions in Evolution’ framework has emerged as the dominant paradigm for understanding the origins of life's hierarchical organization, but it has been criticized on the grounds that it lacks theoretical unity, that is, that the events included in the framework do not constitute a coherent category. I agree with this criticism, and I argue that the best response is to modify the framework so that the events it includes do comprise a coherent category, one whose members share fundamental (...)
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  • The Impact of Population Bottlenecks on the Social Lives of Microbes.Makmiller Pedroso - 2018 - Biological Theory 13 (3):190-198.
    Microbes often live in association with dense multicellular aggregates, especially biofilms, and the construction of these aggregates typically requires microbial cells to produce public goods, such as enzymes and signaling molecules. Public-goods producers are, in turn, vulnerable to exploitation by free-rider cells that consume the public goods without paying for their production costs. The cell population of a biofilm or other microbial aggregates are expected to pass through bottlenecks due to a wide range of factors, such as antibiotic treatments and (...)
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  • The economic origins of ultrasociality.John Gowdy & Lisi Krall - 2016 - Behavioral and Brain Sciences 39:1-63.
    Ultrasociality refers to the social organization of a few species, including humans and some social insects, having a complex division of labor, city-states, and an almost exclusive dependence on agriculture for subsistence. We argue that the driving forces in the evolution of these ultrasocial societies were economic. With the agricultural transition, species could directly produce their own food and this was such a competitive advantage that those species now dominate the planet. Once underway, this transition was propelled by the selection (...)
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  • Organizational requirements for multicellular autonomy: insights from a comparative case study.Argyris Arnellos, Alvaro Moreno & Kepa Ruiz-Mirazo - 2014 - Biology and Philosophy 29 (6):851-884.
    In this paper we explore the organizational conditions underlying the emergence of organisms at the multicellular level. More specifically, we shall propose a general theoretical scheme according to which a multicellular organism is an ensemble of cells that effectively regulates its own development through collective mechanisms of control of cell differentiation and cell division processes. This theoretical result derives from the detailed study of the ontogenetic development of three multicellular systems and, in particular, of their corresponding cell-to-cell signaling networks. The (...)
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  • The other eukaryotes in light of evolutionary protistology.Maureen A. O’Malley, Alastair G. B. Simpson & Andrew J. Roger - 2013 - Biology and Philosophy 28 (2):299-330.
    In order to introduce protists to philosophers, we outline the diversity, classification, and evolutionary importance of these eukaryotic microorganisms. We argue that an evolutionary understanding of protists is crucial for understanding eukaryotes in general. More specifically, evolutionary protistology shows how the emphasis on understanding evolutionary phenomena through a phylogeny-based comparative approach constrains and underpins any more abstract account of why certain organismal features evolved in the early history of eukaryotes. We focus on three crucial episodes of this history: the origins (...)
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  • (1 other version)Time and Fitness in Evolutionary Transitions in Individuality.Pierrick Bourrat - unknown
    It is striking that the concept of fitness although fundamental in evolutionary theory, still remains ambiguous. I argue here that time, although usually neglected, is an important parameter in regards to the concept of fitness. I will show some of the benefits of taking it seriously using the example of recent debates over evolutionary transitions in individuality. I start from Okasha's assertion that once an evolutionary transition in individuality is completed an ontologically new level of selection emerges from lower levels (...)
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  • Transitions in evolution: a formal analysis.Pierrick Bourrat - 2021 - Synthese 198 (4):3699-3731.
    Evolutionary transitions in individuality (ETIs) are events during which individuals at a given level of organization (particles) interact to form higher-level entities (collectives) which are then recognized as new individuals at that level. ETIs are intimately related to levels of selection, which, following Okasha, can be approached from two different perspectives. One, referred to as ‘synchronic’, asks whether selection occurs at the collective level while the partitioning of particles into collectives is taken for granted. The other, referred to as ‘diachronic’, (...)
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  • (1 other version)Levels, Time and Fitness in Evolutionary Transitions in Individuality.Pierrick Bourrat - 2015 - Philosophy, Theory, and Practice in Biology 7 (20150505).
    Yes, fitness is the central concept of evolutionary biology, but it is an elusive concept. Almost everyone who looks at it seriously comes out in a different place.
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  • Why flying dogs are rare: A general theory of luck in evolutionary transitions.Leonore Fleming & Robert Brandon - 2015 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 49:24-31.
    There is a worry that the ‘major transitions in evolution’ represent an arbitrary group of events. This worry is warranted, and we show why. We argue that the transition to a new level of hierarchy necessarily involves a nonselectionist chance process. Thus any unified theory of evolutionary transitions must be more like a general theory of fortuitous luck, rather than a rigid formulation of expected events. We provide a systematic account of evolutionary transitions based on a second-order regularity of chance (...)
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  • Multispecies individuals.Pierrick Bourrat & Paul E. Griffiths - 2018 - History and Philosophy of the Life Sciences 40 (2):33.
    We assess the arguments for recognising functionally integrated multispecies consortia as genuine biological individuals, including cases of so-called ‘holobionts’. We provide two examples in which the same core biochemical processes that sustain life are distributed across a consortium of individuals of different species. Although the same chemistry features in both examples, proponents of the holobiont as unit of evolution would recognize one of the two cases as a multispecies individual whilst they would consider the other as a compelling case of (...)
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  • Moving Past Conventionalism About Multilevel Selection.Pierrick Bourrat - forthcoming - Erkenntnis:1-14.
    The formalism used to describe evolutionary change in a multilevel setting can be used equally to re-describe the situation as one where all the selection occurs at the individual level. Thus, whether multilevel or individual-level selection occurs seems to be a matter of convention rather than fact. Yet, group selection is regarded by some as an important concept with factual rather than conventional elements. I flesh out an alternative position that regards groups as a target of selection in a way (...)
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  • The gene’s-eye view, major transitions and the formal darwinism project.Andrew F. G. Bourke - 2014 - Biology and Philosophy 29 (2):241-248.
    I argue that Grafen’s formal darwinism project could profitably incorporate a gene’s-eye view, as informed by the major transitions framework. In this, instead of the individual being assumed to maximise its inclusive fitness, genes are assumed to maximise their inclusive fitness. Maximisation of fitness at the individual level is not a straightforward concept because the major transitions framework shows that there are several kinds of biological individual. In addition, individuals have a definable fitness, exhibit individual-level adaptations and arise in a (...)
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  • The cultural evolution of emergent group-level traits.Paul E. Smaldino - 2014 - Behavioral and Brain Sciences 37 (3):243-254.
    Many of the most important properties of human groups – including properties that may give one group an evolutionary advantage over another – are properly defined only at the level of group organization. Yet at present, most work on the evolution of culture has focused solely on the transmission of individual-level traits. I propose a conceptual extension of the theory of cultural evolution, particularly related to the evolutionary competition between cultural groups. The key concept in this extension is the emergent (...)
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  • Gestalt-Switching and the Evolutionary Transitions.Peter Godfrey-Smith & Benjamin Kerr - 2013 - British Journal for the Philosophy of Science 64 (1):205-222.
    Formal methods developed for modeling levels of selection problems have recently been applied to the investigation of major evolutionary transitions. We discuss two new tools of this kind. First, the ‘near-variant test’ can be used to compare the causal adequacy of predictively equivalent representations. Second, ‘state-variable gestalt-switching’ can be used to gain a useful dual perspective on evolutionary processes that involve both higher and lower level populations.
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  • Modeling the evolution of interconnected processes: It is the song and the singers.Eric Bapteste & François Papale - 2021 - Bioessays 43 (1):2000077.
    Recently, Doolittle and Inkpen formulated a thought provoking theory, asserting that evolution by natural selection was responsible for the sideways evolution of two radically different kinds of selective units (also called Domains). The former entities, termed singers, correspond to the usual objects studied by evolutionary biologists (gene, genomes, individuals, species, etc.), whereas the later, termed songs, correspond to re‐produced biological and ecosystemic functions, processes, information, and memes. Singers perform songs through selected patterns of interactions, meaning that a wealth of critical (...)
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  • Molecular organisms: John Archibald, One Plus One Equals One: Symbiosis and the Origin of Complex Life. Oxford: Oxford University Press, 2014.Maureen A. O’Malley - 2016 - Biology and Philosophy 31 (4):571-589.
    Protistology, and evolutionary protistology in particular, is experiencing a golden research era. It is an extended one that can be dated back to the 1970s, which is when the molecular rebirth of microbial phylogeny began in earnest. John Archibald, a professor of evolutionary microbiology at Dalhousie University, focuses on the beautiful story of endosymbiosis in his book, John Archibald, One Plus One Equals One: Symbiosis and the Origin of Complex Life. However, this historical narrative could be treated as synecdochal of (...)
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  • Major problems in evolutionary transitions: how a metabolic perspective can enrich our understanding of macroevolution.Maureen A. O’Malley & Russell Powell - 2016 - Biology and Philosophy 31 (2):159-189.
    The model of major transitions in evolution devised by Maynard Smith and Szathmáry has exerted tremendous influence over evolutionary theorists. Although MTE has been criticized for inconsistently combining different types of event, its ongoing appeal lies in depicting hierarchical increases in complexity by means of evolutionary transitions in individuality. In this paper, we consider the implications of major evolutionary events overlooked by MTE and its ETI-oriented successors, specifically the biological oxygenation of Earth, and the acquisitions of mitochondria and plastids. By (...)
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  • Computer Science Meets Evolutionary Biology: Pure Possible Processes and the Issue of Gradualism.Philippe Huneman - 2012 - In Torres Juan, Pombo Olga, Symons John & Rahman Shahid (eds.), Special sciences and the Unity of Science. Springer. pp. 137--162.
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  • Extensive social choice and the measurement of group fitness in biological hierarchies.Walter Bossert, Chloe X. Qi & John A. Weymark - 2013 - Biology and Philosophy 28 (1):75-98.
    Extensive social choice theory is used to study the problem of measuring group fitness in a two-level biological hierarchy. Both fixed and variable group size are considered. Axioms are identified that imply that the group measure satisfies a form of consequentialism in which group fitness only depends on the viabilities and fecundities of the individuals at the lower level in the hierarchy. This kind of consequentialism can take account of the group fitness advantages of germ-soma specialization, which is not possible (...)
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  • Measuring group fitness in a biological hierarchy: An axiomatic social choice approach.Walter Bossert, Chloe X. Qi & John A. Weymark - 2013 - Economics and Philosophy 29 (3):301-323.
    This article illustrates how axiomatic social choice theory can be used in the evaluation of measures of group fitness for a biological hierarchy, thereby contributing to the dialogue between the philosophy of biology and social choice theory. It provides an axiomatic characterization of the ordering underlying the MichodSolariNedelcu index of group fitness for a multicellular organism. The MVSHN index has been used to analyse the germ-soma specialization and the fitness decoupling between the cell and organism levels that takes place during (...)
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  • Essay Review: Exploring the Conceptual Foundations of Post-Hamiltonian Evolutionary Biology—Rationality and Evolution of Social Agents.Philippe Huneman - 2020 - Acta Biotheoretica 68 (4):453-467.
    Evolutionary theorists often talk as if natural selection were choosing the most adapted traits, or if organisms were deciding to do the most adaptive strategy. Moreover, the payoff of those decisions often depend on what others are doing, and since Hamilton (1964), biologists possess conceptual tools such as kin selection and inclusive fitness to make sense of outcomes of evolution in these contexts, even when they seem unadaptive (such as sterility). The link between selection and adaptation through which selection or (...)
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