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Mechanisms revisited

Synthese 183 (3):409-427 (2011)

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  1. (1 other version)A weakened mechanism is still a mechanism: On the causal role of absences in mechanistic explanation.Alexander Mebius - 2014 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 45:43-48.
    Much contemporary debate on the nature of mechanisms centers on the issue of modulating negative causes. One type of negative causability, which I refer to as "causation by absence," appears difficult to incorporate into modern accounts of mechanistic explanation. This paper argues that a recent attempt to resolve this problem, proposed by Benjamin Barros, requires improvement as it overlooks the fact that not all absences qualify as sources of mechanism failure. I suggest that there are a number of additional types (...)
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  • (1 other version)A weakened mechanism is still a mechanism: On the causal role of absences in mechanistic explanation.Alexander Mebius - 2013 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 45 (1):43-48.
    Much contemporary debate on the nature of mechanisms centers on the issue of modulating negative causes. One type of negative causability, which I refer to as “causation by absence,” appears difficult to incorporate into modern accounts of mechanistic explanation. This paper argues that a recent attempt to resolve this problem, proposed by Benjamin Barros, requires improvement as it overlooks the fact that not all absences qualify as sources of mechanism failure. I suggest that there are a number of additional types (...)
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  • On closing the gap between philosophical concepts and their usage in scientific practice: a lesson from the debate about natural selection as a mechanism.Lucas J. Matthews - 2016 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 55:21-28.
    In addition to theorizing about the role and value of mechanisms in scientific explanation or the causal structure of the world, there is a fundamental task of getting straight what a ‘mechanism’ is in the first place. Broadly, this paper is about the challenge of application: the challenge of aligning one's philosophical account of a scientific concept with the manner in which that concept is actually used in scientific practice. This paper considers a case study of the challenge of application (...)
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  • Three kinds of new mechanism.Arnon Levy - 2013 - Biology and Philosophy 28 (1):99-114.
    I distinguish three theses associated with the new mechanistic philosophy – concerning causation, explanation and scientific methodology. Advocates of each thesis are identified and relationships among them are outlined. I then look at some recent work on natural selection and mechanisms. There, attention to different kinds of New Mechanism significantly affects of what is at stake.
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  • On the relation between quantum mechanical and neo-mechanistic ontologies and explanatory strategies.Meinard Kuhlmann & Stuart Glennan - 2014 - European Journal for Philosophy of Science 4 (3):337-359.
    Advocates of the New Mechanicism in philosophy of science argue that scientific explanation often consists in describing mechanisms responsible for natural phenomena. Despite its successes, one might think that this approach does not square with the ontological strictures of quantum mechanics. New Mechanists suppose that mechanisms are composed of objects with definite properties, which are interconnected via local causal interactions. Quantum mechanics calls these suppositions into question. Since mechanisms are hierarchical it appears that even macroscopic mechanisms must supervene on a (...)
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  • How and when are topological explanations complete mechanistic explanations? The case of multilayer network models.Beate Krickel, Leon de Bruin & Linda Douw - 2023 - Synthese 202 (1):1-21.
    The relationship between topological explanation and mechanistic explanation is unclear. Most philosophers agree that at least some topological explanations are mechanistic explanations. The crucial question is how to make sense of this claim. Zednik (Philos Psychol 32(1):23–51, 2019) argues that topological explanations are mechanistic if they (i) describe mechanism sketches that (ii) pick out organizational properties of mechanisms. While we agree with Zednik’s conclusion, we critically discuss Zednik’s account and show that it fails as a general account of how and (...)
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  • On the Limits of Causal Modeling: Spatially-Structurally Complex Biological Phenomena.Marie I. Kaiser - 2016 - Philosophy of Science 83 (5):921-933.
    This paper examines the adequacy of causal graph theory as a tool for modeling biological phenomena and formalizing biological explanations. I point out that the causal graph approach reaches it limits when it comes to modeling biological phenomena that involve complex spatial and structural relations. Using a case study from molecular biology, DNA-binding and -recognition of proteins, I argue that causal graph models fail to adequately represent and explain causal phenomena in this field. The inadequacy of these models is due (...)
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  • Backtracking Analysis and Causal Ascription of Singular Historicals.Richard Wei Tzu Hou - 2020 - Philosophia 48 (4):1447-1467.
    One task of historians is to construct causal ascription of singular historicals between eminent historical events. For instance, the controversy resulting from the confusing butterfly ballot of Florida’s year 2000 presidential election cost Gore his presidency. However, to research into these matters is inevitably to appeal to counterfactual deliberation in an epistemic fashion because the past is fixed. One standard idea is Max Weber’s, Weber causation: “f was a cause of φ” is assertable iff “¬f □→ ¬φ” is assertable. Reiss (...)
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  • From dual systems to dual function: rethinking methodological foundations of behavioural economics.Carsten Herrmann-Pillath - 2019 - Economics and Philosophy 35 (3):403-422.
    Building on an overview of dual systems theories in behavioural economics, the paper presents a methodological assessment in terms of the mechanistic explanations framework that has gained prominence in philosophy of the neurosciences. I conclude that they fail to meet the standards of causal explanations and I suggest an alternative ‘dual functions’ view based on Marr’s methodology of computational neuroscience. Recent psychological and neuroscience research undermines the case for a categorization of brain processes in terms of properties such as relative (...)
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  • Interventionist Omissions: A Critical Case Study of Mechanistic Explanation in Biology.Melinda Bonnie Fagan - 2016 - Philosophy of Science 83 (5):1082-1097.
    It is widely assumed that mechanistic explanations are causal explanations. Many prominent new mechanists endorse interventionism as the correct analysis of explanatory causal models in biology and other fields. This article argues that interventionism is not entirely satisfactory in this regard. A case study of Jacob and Monod’s operon model shows that at least some important mechanistic explanations in biology present significant contrasts with the interventionist account. This result motivates a more inclusive approach to mechanistic explanation, allowing for noncausal aspects.
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  • Inference to the best explanation as a theory for the quality of mechanistic evidence in medicine.Stefan Dragulinescu - 2017 - European Journal for Philosophy of Science 7 (2):353-372.
    Inference to the Best Explanation is usually employed in the Scientific Realism debates. As far as particular scientific theories are concerned, its most ready usage seems to be that of a theory of confirmation. There are however more uses of IBE, namely as an epistemological theory of testimony and as a means of categorising and justifying the sources of evidence. In this paper, I will present, develop and exemplify IBE as a theory of the quality of evidence - taking examples (...)
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  • The Russo–Williamson Theses in the social sciences: Causal inference drawing on two types of evidence.François Claveau - 2012 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 43 (4):806-813.
    This article examines two theses formulated by Russo and Williamson in their study of causal inference in the health sciences. The two theses are assessed against evidence from a specific case in the social sciences, i.e., research on the institutional determinants of the aggregate unemployment rate. The first Russo–Williamson Thesis is that a causal claim can only be established when it is jointly supported by difference-making and mechanistic evidence. This thesis is shown not to hold. While researchers in my case (...)
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  • The Agency Theory of Causality, Anthropomorphism, and Simultaneity.Marco Buzzoni - 2014 - International Studies in the Philosophy of Science 28 (4):375-395.
    The purpose of this article is to examine two important issues concerning the agency theory of causality: the charge of anthropomorphism and the relation of simultaneous causation. After a brief outline of the agency theory, sections 2–4 contain the refutation of the three main forms in which the charge of anthropomorphism is to be found in the literature. It will appear that it is necessary to distinguish between the subjective and the objective aspect of the concept of causation. This will (...)
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  • Stability, breadth and guidance.Thomas Blanchard, Nadya Vasilyeva & Tania Lombrozo - 2018 - Philosophical Studies 175 (9):2263-2283.
    Much recent work on explanation in the interventionist tradition emphasizes the explanatory value of stable causal generalizations—i.e., causal generalizations that remain true in a wide range of background circumstances. We argue that two separate explanatory virtues are lumped together under the heading of `stability’. We call these two virtues breadth and guidance respectively. In our view, these two virtues are importantly distinct, but this fact is neglected or at least under-appreciated in the literature on stability. We argue that an adequate (...)
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  • From interventions to mechanistic explanations.Tudor M. Baetu - 2016 - Synthese 193 (10).
    An important strategy in the discovery of biological mechanisms involves the piecing together of experimental results from interventions. However, if mechanisms are investigated by means of ideal interventions, as defined by James Woodward and others, then the kind of information revealed is insufficient to discriminate between modular and non-modular causal contributions. Ideal interventions suffice for constructing webs of causal dependencies that can be used to make some predictions about experimental outcomes, but tell us little about how causally relevant factors are (...)
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  • A mechanistic guide to reductive physicalism.Tudor M. Baetu - 2022 - European Journal for Philosophy of Science 12 (4):1-21.
    Causal mediation mechanisms are well supported by available experimental evidence and provide a practicable way to reductive physicalism. According to the causal mediation account of mechanistic explanation, descriptions as diverse as ‘black-box’ phenomena, mechanistic sketches and schemas mixing physically interpreted and operationalized biological, psychological and social variables, and detailed descriptions of mechanisms refer to the same causal structure circumscribed within the spatiotemporal boundaries of a replicable experimental setup. The coreference of coarser- and finer-grained descriptions of causal structures opens new possibilities (...)
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  • The Metaphysics of Causation in Biological Mechanisms: A Case of the Genetic Switch in Lambda Phage.Zvonimir Anić - 2021 - Acta Biotheoretica 69 (3):435-448.
    The emphasis on the organization of entities and their activities and interactions has been labeled one of the most distinct contributions of mechanistic philosophy. In this paper I discuss the manner in which the organization of entities and their activities and interactions participates in bringing about phenomena. I present a well-known example from molecular biology—the functioning of the genetic switch in phage lambda—and discuss Marco J. Nathan’s notion of causation by concentration. Nathan introduces causation by concentration to account for the (...)
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  • Feature dependence: A method for reconstructing actual causes in engineering failure investigations.Yafeng Wang - 2022 - Studies in History and Philosophy of Science Part A 96:100-111.
    Engineering failure investigations seek to reconstruct the actual causes of major engineering failures. The investigators need to establish the existence of certain past events and the actual causal relationships that these events bear to the failures in question. In this paper, I examine one method for reconstructing the actual causes of failure events, which I call "feature dependence". The basic idea of feature dependence is that some features of an event are informative about the features of its causes; therefore, the (...)
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  • Cementing Science. Understanding Science through Its Development.Veli Virmajoki - 2019 - Dissertation, University of Turku
    In this book, I defend the present-centered approach in historiography of science (i.e. study of the history of science), build an account for causal explanations in historiography of science, and show the fruitfulness of the approach and account in when we attempt to understand science. -/- The present-centered approach defines historiography of science as a field that studies the developments that led to the present science. I argue that the choice of the targets of studies in historiography of science should (...)
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  • Collingwood and Manipulability-based Approaches to Causation: Methodological Issues.E. Popa - 2016 - Collingwood and British Idealism Studies 22 (1):139-166.
    This paper discusses methodological similarities between Collingwood's approach to causation and contemporary manipulability-based views. Firstly, I argue that on both approaches there is a preoccupation with the origin of causal concepts which further connects to the aim of establishing the priority of a certain concept/sense of causation as more fundamental. The significant difference lies in Collingwood's focus on the logical and historical priority (Collingwood's sense I) while in more recent theories the focus has been on psychology (i.e., on different philosophical (...)
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  • Philosophical controversies in the evaluation of medical treatments : With a focus on the evidential roles of randomization and mechanisms in Evidence-Based Medicine.Alexander Mebius - 2015 - Dissertation, Kth Royal Institute of Technology
    This thesis examines philosophical controversies surrounding the evaluation of medical treatments, with a focus on the evidential roles of randomised trials and mechanisms in Evidence-Based Medicine. Current 'best practice' usually involves excluding non-randomised trial evidence from systematic reviews in cases where randomised trials are available for inclusion in the reviews. The first paper challenges this practice and evaluates whether adding of evidence from non-randomised trials might improve the quality and precision of some systematic reviews. The second paper compares the alleged (...)
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  • Against Harmony: Infinite Idealizations and Causal Explanation.Iulian D. Toader - 2015 - In Ilie Parvu, Gabriel Sandu & Iulian D. Toader (eds.), Romanian Studies in Philosophy of Science. Boston Studies in the Philosophy and History of Science, vol. 313: Springer. pp. 291-301.
    This paper argues against the view that the standard explanation of phase transitions in statistical mechanics may be considered a causal explanation, a distortion that can nevertheless successfully represent causal relations.
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  • (1 other version)From Life-Like to Mind-Like Explanation: Natural Agency and the Cognitive Sciences.Alex Djedovic - 2020 - Dissertation, University of Toronto, St. George Campus
    This dissertation argues that cognition is a kind of natural agency. Natural agency is the capacity that certain systems have to act in accordance with their own norms. Natural agents are systems that bias their repertoires in response to affordances in the pursuit of their goals. Cognition is a special mode of this general phenomenon. Cognitive systems are agents that have the additional capacity to actively take their worlds to be certain ways, regardless of whether the world is really that (...)
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  • Mechanisms, counterfactuals and laws.Stavros Ioannidis & Stathis Psillos - 2017 - In Stuart Glennan & Phyllis McKay Illari (eds.), The Routledge Handbook of Mechanisms and Mechanical Philosophy. Routledge. pp. 144-156.
    In this chapter we examine the relation between mechanisms and laws/counterfactuals by revisiting the main notions of mechanism found in the literature. We distinguish between two different conceptions of ‘mechanism’: mechanisms-of underlie or constitute a causal process; mechanisms-for are complex systems that function so as to produce a certain behavior. According to some mechanists, a mechanism fulfills both of these roles simultaneously. The main argument of the chapter is that there is an asymmetrical dependence between both kinds of mechanisms and (...)
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  • The Oxford Handbook of Causal Reasoning.Michael Waldmann (ed.) - 2017 - Oxford, England: Oxford University Press.
    Causal reasoning is one of our most central cognitive competencies, enabling us to adapt to our world. Causal knowledge allows us to predict future events, or diagnose the causes of observed facts. We plan actions and solve problems using knowledge about cause-effect relations. Without our ability to discover and empirically test causal theories, we would not have made progress in various empirical sciences. In the past decades, the important role of causal knowledge has been discovered in many areas of cognitive (...)
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  • Why there isn’t inter-level causation in mechanisms.Felipe Romero - 2015 - Synthese 192 (11):3731-3755.
    The experimental interventions that provide evidence of causal relations are notably similar to those that provide evidence of constitutive relevance relations. In the first two sections, I show that this similarity creates a tension: there is an inconsistent triad between Woodward’s popular interventionist theory of causation, Craver’s mutual manipulability account of constitutive relevance in mechanisms, and a variety of arguments for the incoherence of inter-level causation. I argue for an interpretation of the views in which the tension is merely apparent. (...)
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  • Abstractions and Implementations.Russ Abbott - manuscript
    Fundamental to Computer Science is the distinction between abstractions and implementations. When that distinction is applied to various philosophical questions it yields the following conclusions. -/- • EMERGENCE. It isn’t as mysterious as it’s made out to be; the possibility of strong emergence is not a threat to science. -/- • INTERACTIONS BETWEEN HIGHER-LEVEL ENTITIES. Physical interaction among higher-level entities is illusory. Abstract interactions are the source of emergence, new domains of knowledge, and complex systems. -/- • PHYSICS and the (...)
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  • Causation in a Virtual World: a Mechanistic Approach.Billy Wheeler - 2022 - Philosophy and Technology 35 (1):1-26.
    Objects appear to causally interact with one another in virtual worlds, such as video games, virtual reality, and training simulations. Is this causation real or is it illusory? In this paper I argue that virtual causation is as real as physical causation. I achieve this in two steps: firstly, I show how virtual causation has all the important hallmarks of relations that are causal, as opposed to merely accidental, and secondly, I show how virtual causation is genuine according to one (...)
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  • (1 other version)On the Incompatibility of Dynamical Biological Mechanisms and Causal Graph Theory.Marcel Weber - unknown
    I examine the adequacy of the causal graph-structural equations approach to causation for modeling biological mechanisms. I focus in particular on mechanisms with complex dynamics such as the PER biological clock mechanism in Drosophila. I show that a quantitative model of this mechanism that uses coupled differential equations – the well-known Goldbeter model – cannot be adequately represented in the standard causal graph framework, even though this framework does permit causal cycles. The reason is that the model contains dynamical information (...)
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  • When is it Mental?Stuart Glennan - 2015 - Humana Mente 8 (29).
    Most philosophical debate over mental causation has been concerned with reconciling commonsense intuitions that there are causal interactions between the mental and the physical with philosophical theories of the nature of the mental that seem to suggest otherwise. My concern is with a different and more practical problem. We often confront some cognitive, affective, or bodily phenomenon, and wonder about its source – its etiology or its underlying causal basis. For instance, you might wonder whether your queasiness due to something (...)
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  • Eschewing Entities: Outlining a Biology Based Form of Structural Realism.Steven French - 2013 - In Vassilios Karakostas & Dennis Dieks (eds.), EPSA11 Perspectives and Foundational Problems in Philosophy of Science. Cham: Springer. pp. 371--381.
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  • Mechanistic and Neo-mechanistic Accounts of Causation: How Salmon Already Got (Much of) It Right.Raffaella Campaner - 2013 - Metatheoria – Revista de Filosofía E Historia de la Ciencia 3:81--98.
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  • The role of mechanism knowledge in singular causation judgments.Simon Stephan & Michael R. Waldmann - 2022 - Cognition 218 (C):104924.
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