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Information in Biology: A Fictionalist Account

Noûs 45 (4):640-657 (2010)

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  1. (1 other version)Models and fiction.Roman Frigg - 2007 - Synthese 172 (2):251-268.
    Most scientific models are not physical objects, and this raises important questions. What sort of entity are models, what is truth in a model, and how do we learn about models? In this paper I argue that models share important aspects in common with literary fiction, and that therefore theories of fiction can be brought to bear on these questions. In particular, I argue that the pretence theory as developed by Walton (1990, Mimesis as make-believe: on the foundations of the (...)
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  • Pretense for the Complete Idiom.Andy Egan - 2008 - Noûs 42 (3):381-409.
    Idioms – expressions like kick the bucket and let the cat out of the bag – are strange. They behave in ways that ordinary multi-word expressions do not. One distinctive and troublesome feature of idioms is their unpredictability: The meanings of sentences in which idiomatic phrases occur are not the ones that we would get by applying the usual compositional rules to the usual meanings of their (apparent) constituents. This sort of behavior requires an explanation. I will argue that the (...)
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  • A Mathematical Theory of Communication.Claude Elwood Shannon - 1948 - Bell System Technical Journal 27 (April 1924):379–423.
    The mathematical theory of communication.
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  • (1 other version)Mimesis as make-believe: on the foundations of the representational arts.Kendall L. Walton - 1990 - Cambridge: Harvard University Press.
    Mimesis as Make-Believe is important reading for everyone interested in the workings of representational art.
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  • The arbitrariness of the genetic code.Ulrich E. Stegmann - 2004 - Biology and Philosophy 19 (2):205-222.
    The genetic code has been regarded as arbitrary in the sense that the codon-amino acid assignments could be different than they actually are. This general idea has been spelled out differently by previous, often rather implicit accounts of arbitrariness. They have drawn on the frozen accident theory, on evolutionary contingency, on alternative causal pathways, and on the absence of direct stereochemical interactions between codons and amino acids. It has also been suggested that the arbitrariness of the genetic code justifies attributing (...)
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  • (1 other version)The concept of information in biology.John Maynard Smith - 2000 - Philosophy of Science 67 (2):177-194.
    The use of informational terms is widespread in molecular and developmental biology. The usage dates back to Weismann. In both protein synthesis and in later development, genes are symbols, in that there is no necessary connection between their form (sequence) and their effects. The sequence of a gene has been determined, by past natural selection, because of the effects it produces. In biology, the use of informational terms implies intentionality, in that both the form of the signal, and the response (...)
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  • Information in genetics and developmental biology: Comments on Maynard Smith.Sahotra Sarkar - 2000 - Philosophy of Science 67 (2):208-213.
    Maynard Smith notes that he provides a natural history and not a philosophical analysis of the use of concepts of information in contemporary biology. Just a natural history, however rich, would do little to resolve the ongoing controversy about the role of these concepts in biology. None of the disputants deny that the biological use of these concepts is pervasive. The dispute is about whether these concepts—and the framework in which they are embedded—continue to be of explanatory value in contemporary (...)
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  • (1 other version)Pushmi-pullyu representations.Ruth Garrett Millikan - 1995 - Philosophical Perspectives 9:185-200.
    A list of groceries, Professor Anscombe once suggested, might be used as a shopping list, telling what to buy, or it might be used as an inventory list, telling what has been bought (Anscombe 1957). If used as a shopping list, the world is supposed to conform to the representation: if the list does not match what is in the grocery bag, it is what is in the bag that is at fault. But if used as an inventory list, the (...)
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  • Language, Thought, and Other Biological Categories: New Foundations for Realism.Ruth Garrett Millikan - 1984 - MIT Press.
    Preface by Daniel C. Dennett Beginning with a general theory of function applied to body organs, behaviors, customs, and both inner and outer representations, ...
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  • (1 other version)7 The Fearless Vampire Conservator: Philip Kitcher, Genetic Determinism, and the Informational Gene.Paul E. Griffiths - 2006 - In Eva M. Neumann-Held, Christoph Rehmann-Sutter, Barbara Herrnstein Smith & E. Roy Weintraub (eds.), Genes in Development: Re-reading the Molecular Paradigm. Duke University Press. pp. 175-198.
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  • (1 other version)Mimesis as Make-Believe: On the Foundations of the Representational Arts.Kendall L. WALTON - 1990 - Philosophy 66 (258):527-529.
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  • (1 other version)Metaphor and Prop Oriented Make‐Believe.Kendall L. Walton - 1993 - European Journal of Philosophy 1 (1):39-57.
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  • The extended replicator.Kim Sterelny, Kelly C. Smith & Michael Dickison - 1996 - Biology and Philosophy 11 (3):377-403.
    This paper evaluates and criticises the developmental systems conception of evolution and develops instead an extension of the gene's eye conception of evolution. We argue (i) Dawkin's attempt to segregate developmental and evolutionary issues about genes is unsatisfactory. On plausible views of development it is arbitrary to single out genes as the units of selection. (ii) The genotype does not carry information about the phenotype in any way that distinguishes the role of the genes in development from that other factors. (...)
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  • Information: Its interpretation, its inheritance, and its sharing.Eva Jablonka - 2002 - Philosophy of Science 69 (4):578-605.
    The semantic concept of information is one of the most important, and one of the most problematical concepts in biology. I suggest a broad definition of biological information: a source becomes an informational input when an interpreting receiver can react to the form of the source (and variations in this form) in a functional manner. The definition accommodates information stemming from environmental cues as well as from evolved signals, and calls for a comparison between information‐transmission in different types of inheritance (...)
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  • Language, Thought, and Other Biological Categories.Ruth Garrett Millikan - 1984 - Behaviorism 14 (1):51-56.
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  • (1 other version)Pushmi-pullyu representations.Ruth G. Millikan - 1987 - In James E. Tomberlin (ed.), Philosophical Perspectives. Atascadero, Calif.: Ridgeview Publishing. pp. 185-200.
    A list of groceries, Professor Anscombe once suggested, might be used as a shopping list, telling what to buy, or it might be used as an inventory list, telling what has been bought (Anscombe 1957). If used as a shopping list, the world is supposed to conform to the representation: if the list does not match what is in the grocery bag, it is what is in the bag that is at fault. But if used as an inventory list, the (...)
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  • Intention and action among the macromolecules.Alexander Rosenberg - 1986 - In Nicholas Rescher (ed.), Current Issues in Teleology. University Press of America. pp. 65--56.
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  • Representation in the genome and in other inheritance systems.Nicholas Shea - 2007 - Biology and Philosophy 22 (3):313-331.
    There is ongoing controversy as to whether the genome is a representing system. Although it is widely recognised that DNA carries information, both correlating with and coding for various outcomes, neither of these implies that the genome has semantic properties like correctness or satisfaction conditions, In the Scope of Logic, Methodology, and the Philosophy of Sciences, Vol. II. Kluwer, Dordrecht, pp. 387–400). Here a modified version of teleosemantics is applied to the genome to show that it does indeed have semantic (...)
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  • The strategy of model-based science.Peter Godfrey-Smith - 2006 - Biology and Philosophy 21 (5):725-740.
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  • On the theoretical role of "genetic coding".Peter Godfrey-Smith - 2000 - Philosophy of Science 67 (1):26-44.
    The role played by the concept of genetic coding in biology is discussed. I argue that this concept makes a real contribution to solving a specific problem in cell biology. But attempts to make the idea of genetic coding do theoretical work elsewhere in biology, and in philosophy of biology, are probably mistaken. In particular, the concept of genetic coding should not be used (as it often is) to express a distinction between the traits of whole organisms that are coded (...)
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  • Genetic information: A metaphor in search of a theory.Paul Edmund Griffiths - 2001 - Philosophy of Science 68 (3):394-412.
    John Maynard Smith has defended against philosophical criticism the view that developmental biology is the study of the expression of information encoded in the genes by natural selection. However, like other naturalistic concepts of information, this ‘teleosemantic’ information applies to many non-genetic factors in development. Maynard Smith also fails to show that developmental biology is concerned with teleosemantic information. Some other ways to support Maynard Smith’s conclusion are considered. It is argued that on any definition of information the view that (...)
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  • The "genetic program" program: A commentary on Maynard Smith on information in biology.Kim Sterelny - 2000 - Philosophy of Science 67 (2):195-201.
    In many texts on evolution the reader will find a characteristic depiction of inheritance and evolution, one showing the generations of an evolving population linked only by a causal flow from genotype to genotype. On this view, the genotype of each organism in this population plays a dual role as both the motor of individual development and as the sole causal channel across the generations. This picture is known to be literally false. In many species, parents exert direct causal influence (...)
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