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  1. The organic codes: an introduction to semantic biology.Marcello Barbieri - 2003 - New York: Cambridge University Press.
    The genetic code appeared on Earth with the first cells. The codes of cultural evolution arrived almost four billion years later. These are the only codes that are recognized by modern biology. In this book, however, Marcello Barbieri explains that there are many more organic codes in nature, and their appearance not only took place throughout the history of life but marked the major steps of that history. A code establishes a correspondence between two independent 'worlds', and the codemaker is (...)
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  • Metaphysical and Postmetaphysical Relationships of Humans with Nature and Life.Guenther Witzany - 2010 - In Biocommunication and Natural Genome Editing. Dordrecht: Springer. pp. 01-26.
    First, I offer a short overview on the classical occidental philosophy as propounded by the ancient Greeks and the natural philosophies of the last 2000 years until the dawn of the empiricist logic of science in the twentieth century, which wanted to delimitate classical metaphysics from empirical sciences. In contrast to metaphysical concepts which didn’t reflect on the language with which they tried to explain the whole realm of entities empiricist logic of science initiated the end of metaphysical theories by (...)
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  • Habit formation as symmetry breaking in the early universe.Peder Voetmann Christiansen - 2002 - Sign Systems Studies 30 (1):347-359.
    This paper tries to combine Peirce’s cosmology and metaphysics with current understanding in physics of the evolution of the universe, regarded as an ongoing semiotic process in a living cosmos. While the basic property of Life is viewed as an unexplainable Firstness inherent in the initial iconic state of the vacuous continuum we shall consider and exemplify two sign developing processes: (a) the transition from icon to index is considered as a symmetry breaking emergence of order actualising one among the (...)
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  • What Does it Take to Produce Interpretation? Informational, Peircean and Code-Semiotic Views on Biosemiotics.Søren Brier & Cliff Joslyn - 2013 - Biosemiotics 6 (1):143-159.
    This paper presents a critical analysis of code-semiotics, which we see as the latest attempt to create paradigmatic foundation for solving the question of the emergence of life and consciousness. We view code semiotics as a an attempt to revise the empirical scientific Darwinian paradigm, and to go beyond the complex systems, emergence, self-organization, and informational paradigms, and also the selfish gene theory of Dawkins and the Peircean pragmaticist semiotic theory built on the simultaneous types of evolution. As such it (...)
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  • Three Types of Semiosis.Marcello Barbieri - 2009 - Biosemiotics 2 (1):19-30.
    The existence of different types of semiosis has been recognized, so far, in two ways. It has been pointed out that different semiotic features exist in different taxa and this has led to the distinction between zoosemiosis, phytosemiosis, mycosemiosis, bacterial semiosis and the like. Another type of diversity is due to the existence of different types of signs and has led to the distinction between iconic, indexical and symbolic semiosis. In all these cases, however, semiosis has been defined by the (...)
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  • Creativity: Self-Referential Mistaking, Not Negating. [REVIEW]Victoria N. Alexander - 2013 - Biosemiotics 6 (2):253-272.
    In C. S. Peirce, as well as in the work of many biosemioticians, the semiotic object is sometimes described as a physical “object” with material properties and sometimes described as an “ideal object” or mental representation. I argue that to the extent that we can avoid these types of characterizations we will have a more scientific definition of sign use and will be able to better integrate the various fields that interact with biosemiotics. In an effort to end Cartesian dualism (...)
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  • From the Logic of Science to the Logic of the Living.Tommi Vehkavaara - 2007 - In Marcello Barbieri (ed.), Introduction to biosemiotics. Springer. pp. 257-282.
    Biosemiotics belongs to a class of approaches that provide mental models of life since it applies some semiotic concepts in the explanation of natural phenomena. Such approaches are typically open to anthropomorphic errors. Usually, the main source of such errors is the excessive vagueness of the semiotic concepts used. If the goal of biosemiotics is to be accepted as a science and not as a priori metaphysics, it needs both an appropriate source of the semiotic concepts and a reliable method (...)
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  • The Theory of Meaning.Jakob von Uexküll - 1982 - Semiotica 42 (1).
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  • A stroll through the worlds of animals and men: A picture book of invisible worlds.Jakob von Uexküll - 1992 - Semiotica 89 (4):319-391.
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  • Why and how to naturalize semiotic concepts for biosemiotics.Tommi Vehkavaara - 2002 - Sign Systems Studies 30 (1):293-312.
    Any attempt to develop biosemiotics either towards a new biological ground theory or towards a metaphysics of living nature necessitates some kind of naturalization of its semiotic concepts. Instead of standard physicalistic naturalism, a certain kind of semiotic naturalism is pursued here. The naturalized concepts are defined as referring only to the objects of our external experience. When the semiotic concepts are applied to natural phenomena in biosemiotics, there is a risk of falling into anthropomorphic errors if the semiotic concepts (...)
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  • Natural self-interest, interactive representation, and the emergence of objects and Umwelt.Tommi Vehkavaara - 2003 - Sign Systems Studies 31 (2):547-586.
    In biosemiotics, life and living phenomena are described by means of originally anthropomorphic semiotic concepts. This can be justified if we can show that living systems as self-maintaining far from equilibrium systems create and update some kind of representation about the conditions of their self-maintenance. The point of view is the one of semiotic realism where signs and representations are considered as real and objective natural phenomena without any reference to the specifically human interpreter. It is argued that the most (...)
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  • Natural self-interest, interactive representation, and the emergence of objects and Umwelt.Tommi Vehkavaara - 2003 - Sign Systems Studies 31 (2):547-586.
    In biosemiotics, life and living phenomena are described by means of originally anthropomorphic semiotic concepts. This can be justified if we can show that living systems as self-maintaining far from equilibrium systems create and update some kind of representation about the conditions of their self-maintenance. The point of view is the one of semiotic realism where signs and representations are considered as real and objective natural phenomena without any reference to the specifically human interpreter. It is argued that the most (...)
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  • Material bases of signification.Giorgio Prodi - 1988 - Semiotica 69 (3-4):191-242.
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  • Does the chimpanzee have a theory of mind?David Premack & Guy Woodruff - 1978 - Behavioral and Brain Sciences 1 (4):515-526.
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  • Does the chimpanzee have a theory of mind?David Premack & G. Woodruff - 1978 - Behavioral and Brain Sciences 4 (4):515-629.
    An individual has a theory of mind if he imputes mental states to himself and others. A system of inferences of this kind is properly viewed as a theory because such states are not directly observable, and the system can be used to make predictions about the behavior of others. As to the mental states the chimpanzee may infer, consider those inferred by our own species, for example, purpose or intention, as well as knowledge, belief, thinking, doubt, guessing, pretending, liking, (...)
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  • Physical and Functional Conditions for Symbols, Codes, and Languages.H. H. Pattee - 2008 - Biosemiotics 1 (2):147-168.
    All sciences have epistemic assumptions, a language for expressing their theories or models, and symbols that reference observables that can be measured. In most sciences the language in which their models are expressed are not the focus of their attention, although the choice of language is often crucial for the model. On the contrary, biosemiotics, by definition, cannot escape focusing on the symbol–matter relationship. Symbol systems first controlled material construction at the origin of life. At this molecular level it is (...)
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  • Phytosemiotics.Martin Krampen - 1981 - Semiotica 36 (3-4).
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  • On the Nature of the Subjectivity of Living Things.Yoshimi Kawade - 2009 - Biosemiotics 2 (2):205-220.
    A biosemiotic view of living things is presented that supersedes the mechanistic view of life prevalent in biology today. Living things are active agents with autonomous subjectivity, whose structure is triadic, consisting of the individual organism, its Umwelt and the society. Sociality inheres in every living thing since the very origin of life on the earth. The temporality of living things is guided by the purpose to live, which works as the semantic boundary condition for the processes of embodiment of (...)
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  • Signs of Meaning in the Universe.Jesper Hoffmeyer - 1996 - Advances in Semiotics (Hardcov.
    On this tour of the universe of signs, Jesper Hoffmeyer travels back to the Big Bang, visits the tiniest places deep within cells, and ends his journey with us - complex organisms capable of speech and reason. He shows that life at its most basic depends on the survival of messages written in the code of DNA molecules, and on the tiny cell - the fertilized egg - that must interpret the message and from it construct an organism. What propels (...)
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  • Collected Papers of Charles Sanders Peirce: Pragmatism and pragmaticism and Scientific metaphysics.Charles Sanders Peirce - 1960 - Cambridge: Belknap Press.
    Charles Sanders Peirce has been characterized as the greatest American philosophic genius. He is the creator of pragmatism and one of the founders of modern logic. James, Royce, Schroder, and Dewey have acknowledged their great indebtedness to him. A laboratory scientist, he made notable contributions to geodesy, astronomy, psychology, induction, probability, and scientific method. He introduced into modern philosophy the doctrine of scholastic realism, developed the concepts of chance, continuity, and objective law, and showed the philosophical significance of the theory (...)
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  • Levels of representationality.Mark H. Bickhard - 1998 - Journal of Experimental and Theoretical Artificial Intelligence 10 (2):179-215.
    The dominant assumptions -- throughout contemporary philosophy, psychology, cognitive science, and artificial intelligence -- about the ontology underlying intentionality, and its core of representationality, is that of encodings -- some sort of informational or correspondence or covariation relationship between the represented and its representation that constitutes that representational relationship. There are many disagreements concerning details and implementations, and even some suggestions about claimed alternative ontologies, such as connectionism (though none that escape what I argue is the fundamental flaw in these (...)
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  • Biosemiotics: A functional-evolutionary approach to the analysis of the sense of information.Alexei A. Sharov - forthcoming - Biosemiotics: The Semiotic Web.
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  • Code-duality and the semiotics of nature.Claus Emmeche - manuscript
    The final version of the paper is published pp. 117-166 in: Myrdene Anderson and Floyd Merrell (eds.): On Semiotic Modeling . Mouton de Gruyter, Berlin and New York, 1991.
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  • Limitations on applying Peircean semeiotic. Biosemiotics as applied objective ethics and esthetics rather than semeiotic.Tommi Vehkavaara - 2006 - Journal of Biosemiotics 1 (1):269-308.
    This paper explores the critical conditions of such semiotic realism that is commonly presumed in the so-called Copenhagen interpretation of biosemiotics. The central task is to make basic biosemiotic concepts as clear as possible by applying C.S. Peirce’s pragmaticist methodology to his own concepts, especially to those that have had a strong influence on the Copenhagian biosemiotics. It appears essential to study what kinds of observation the basic semiotic concepts are derived from. Peirce had two different derivations to the concept (...)
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  • The Spandrels of San Marco and the Panglossian Paradigm: A Critique of the Adaptationist Programme.S. J. Gould & R. C. Lewontin - 1979 - In E. Sober (ed.), Conceptual Issues in Evolutionary Biology. The Mit Press. Bradford Books. pp. 73-90.
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  • Basics of Semiotics.John DEELY - 1990
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  • Representational content in humans and machines.Mark H. Bickhard - 1993 - Journal of Experimental and Theoretical Artificial Intelligence 5:285-33.
    This article focuses on the problem of representational content. Accounting for representational content is the central issue in contemporary naturalism: it is the major remaining task facing a naturalistic conception of the world. Representational content is also the central barrier to contemporary cognitive science and artificial intelligence: it is not possible to understand representation in animals nor to construct machines with genuine representation given current (lack of) understanding of what representation is. An elaborated critique is offered to current approaches to (...)
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  • Minimal mind.Alexei A. Sharov - 2013 - In Liz Swan (ed.), Origins of Mind. pp. 343--360.
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  • Function, anticipation, representation.Mark H. Bickhard - 2001 - AIP Conference Proceedings 573:459-469.
    Function emerges in certain kinds of far-from-equilibrium systems. One important kind of function is that of interactive anticipation, an adaptedness to temporal complexity. Interactive anticipation is the locus of the emergence of normative representational content, and, thus, of representation in general: interactive anticipation is the naturalistic core of the evolution of cognition. Higher forms of such anticipation are involved in the subsequent macro-evolutionary sequence of learning, emotions, and reflexive consciousness.
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  • .John Deely - forthcoming - Philosophical Explorations:1-36.
    Journal Name: Semiotica Issue: Ahead of print.
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