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Replication and reproduction

Stanford Encyclopedia of Philosophy (2018)

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  1. (1 other version)Evolution – the Extended Synthesis.Massimo Pigliucci & Gerd B. Muller (eds.) - 2010 - MIT Press.
    In the six decades since the publication of Julian Huxley's Evolution: The Modern Synthesis, spectacular empirical advances in the biological sciences have been accompanied by equally significant developments within the core theoretical framework of the discipline. As a result, evolutionary theory today includes concepts and even entire new fields that were not part of the foundational structure of the Modern Synthesis. In this volume, sixteen leading evolutionary biologists and philosophers of science survey the conceptual changes that have emerged since Huxley's (...)
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  • Darwinian Populations and Natural Selection.Peter Godfrey-Smith - 2009 - Oxford, GB: Oxford University Press.
    The book presents a new way of understanding Darwinism and evolution by natural selection, combining work in biology, philosophy, and other fields.
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  • Unto Others: The Evolution and Psychology of Unselfish Behavior.Elliott Sober & David Sloan Wilson - 1998 - Harvard University Press.
    The authors demonstrate that unselfish behavior is in fact an important feature of both biological and human nature. Their book provides a panoramic view of altruism throughout the animal kingdom--from self-sacrificing parasites to the human capacity for selflessness--even as it explains the evolutionary sense of such behavior.
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  • Evolution as entropy: toward a unified theory of biology.D. R. Brooks - 1988 - Chicago: University of Chicago Press. Edited by E. O. Wiley.
    "By combining recent advances in the physical sciences with some of the novel ideas, techniques, and data of modern biology, this book attempts to achieve a new and different kind of evolutionary synthesis. I found it to be challenging, fascinating, infuriating, and provocative, but certainly not dull."--James H, Brown, University of New Mexico "This book is unquestionably mandatory reading not only for every living biologist but for generations of biologists to come."--Jack P. Hailman, Animal Behaviour , review of the first (...)
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  • Biology as ideology: the doctrine of DNA.Richard C. Lewontin - 1991 - New York, NY: HarperPerennial.
    Following in the fashion of Stephen Jay Gould and Peter Medawar, one of the world's leading scientists examines how "pure science" is in fact shaped and guided by social and political needs and assumptions.
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  • The extended replicator.Kim Sterelny, Kelly C. Smith & Michael Dickison - 1996 - Biology and Philosophy 11 (3):377-403.
    This paper evaluates and criticises the developmental systems conception of evolution and develops instead an extension of the gene's eye conception of evolution. We argue (i) Dawkin's attempt to segregate developmental and evolutionary issues about genes is unsatisfactory. On plausible views of development it is arbitrary to single out genes as the units of selection. (ii) The genotype does not carry information about the phenotype in any way that distinguishes the role of the genes in development from that other factors. (...)
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  • Group fitness and multi-level selection: Replies to commentaries. [REVIEW]Peter Godfrey-Smith & Benjamin Kerr - 2002 - Biology and Philosophy 17 (4):539-549.
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  • The return of the group.Kim Sterelny - 1996 - Philosophy of Science 63 (4):562-584.
    Once upon a time in evolutionary theory, everything happened for the best. Predators killed only the old or the sick. Pecking orders and other dominance hierarchies minimized wasteful conflict within the group. Male displays ensured that only the best and the fittest had mates. In the culmination of this tradition, Wynne-Edwards argued that many species have mechanisms that ensure groups do not over-exploit their resource base. The “central function” of territoriality in birds and other higher animals is “of limiting the (...)
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  • Rethinking hereditary relations: the reconstitutor as the evolutionary unit of heredity.Sophie J. Veigl, Javier Suárez & Adrian Stencel - 2022 - Synthese 200 (5):1-42.
    This paper introduces the reconstitutor as a comprehensive unit of heredity within the context of evolutionary research. A reconstitutor is the structure resulting from a set of relationships between different elements or processes that are actively involved in the recreation of a specific phenotypic variant in each generation regardless of the biomolecular basis of the elements or whether they stand in a continuous line of ancestry. Firstly, we justify the necessity of introducing the reconstitutor by showing the limitations of other (...)
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  • Facts, Conventions, and the Levels of Selection.Pierrick Bourrat - 2021 - Cambridge, UK: Cambridge University Press.
    Debates concerning the units and levels of selection have persisted for over fifty years. One major question in this literature is whether units and levels of selection are genuine, in the sense that they are objective features of the world, or merely reflect the interests and goals of an observer. Scientists and philosophers have proposed a range of answers to this question. This Element introduces this literature and proposes a novel contribution. It defends a realist stance and offers a way (...)
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  • Fidelity and the grain problem in cultural evolution.Mathieu Charbonneau & Pierrick Bourrat - 2021 - Synthese 199 (3-4):5815-5836.
    High-fidelity cultural transmission, rather than brute intelligence, is the secret of our species’ success, or so many cultural evolutionists claim. It has been selected because it ensures the spread, stability and longevity of beneficial cultural traditions, and it supports cumulative cultural change. To play these roles, however, fidelity must be a causally-efficient property of cultural transmission. This is where the grain problem comes in and challenges the explanatory potency of fidelity. Assessing the degree of fidelity of any episode or mechanism (...)
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  • The Selfish Gene. [REVIEW]Gunther S. Stent & Richard Dawkins - 1977 - Hastings Center Report 7 (6):33.
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  • Conditions for Evolution by Natural Selection.Peter Godfrey-Smith - 2007 - Journal of Philosophy 104 (10):489-516.
    Both biologists and philosophers often make use of simple verbal formulations of necessary and sufficient conditions for evolution by natural selection (ENS). Such summaries go back to Darwin's Origin of Species (especially the "Recapitulation"), but recent ones are more compact.1 Perhaps the most commonly cited formulation is due to Lewontin.2 These summaries tend to have three or four conditions, where the core requirement is a combination of variation, heredity, and fitness differences. The summaries are employed in several ways. First, they (...)
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  • Unsimple Truths: Science, Complexity, and Policy.Sandra D. Mitchell - 2009 - London: University of Chicago Press.
    The world is complex, but acknowledging its complexity requires an appreciation for the many roles context plays in shaping natural phenomena. In _Unsimple Truths, _Sandra Mitchell argues that the long-standing scientific and philosophical deference to reductive explanations founded on simple universal laws, linear causal models, and predict-and-act strategies fails to accommodate the kinds of knowledge that many contemporary sciences are providing about the world. She advocates, instead, for a new understanding that represents the rich, variegated, interdependent fabric of many levels (...)
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  • How to Read ‘Heritability’ in the Recipe Approach to Natural Selection.Pierrick Bourrat - 2015 - British Journal for the Philosophy of Science 66 (4):883-903.
    There are two ways evolution by natural selection is conceptualized in the literature. One provides a ‘recipe’ for ENS incorporating three ingredients: variation, differences in fitness, and heritability. The other provides formal equations of evolutionary change and partitions out selection from other causes of evolutionary changes such as transmission biases or drift. When comparing the two approaches there seems to be a tension around the concept of heritability. A recent claim has been made that the recipe approach is flawed and (...)
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  • Darwinizing Culture: The Status of Memetics as a Science.Robert Aunger (ed.) - 2000 - Oxford: Oxford University Press.
    Darwinizing culture: the status of memetics as a science pits leading intellectuals, against each other to battle it out, in this, the first debate over 'memes'. With a foreword by Daniel Dennett, and contributions from Dan Sperber, David Hull, Robert Boyd, Susan Blackmore, Henry Plotkin, and others, the result is a thrilling and challenging debate that will perhaps mark a turning point for the field, and for future research.
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  • Précis of evolution in four dimensions.Eva Jablonka & Marion J. Lamb - 2007 - Behavioral and Brain Sciences 30 (4):353-365.
    In his theory of evolution, Darwin recognized that the conditions of life play a role in the generation of hereditary variations, as well as in their selection. However, as evolutionary theory was developed further, heredity became identified with genetics, and variation was seen in terms of combinations of randomly generated gene mutations. We argue that this view is now changing, because it is clear that a notion of hereditary variation that is based solely on randomly varying genes that are unaffected (...)
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  • Information in genetics and developmental biology: Comments on Maynard Smith.Sahotra Sarkar - 2000 - Philosophy of Science 67 (2):208-213.
    Maynard Smith notes that he provides a natural history and not a philosophical analysis of the use of concepts of information in contemporary biology. Just a natural history, however rich, would do little to resolve the ongoing controversy about the role of these concepts in biology. None of the disputants deny that the biological use of these concepts is pervasive. The dispute is about whether these concepts—and the framework in which they are embedded—continue to be of explanatory value in contemporary (...)
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  • From Bacteria to Bach and Back: The Evolution of Minds.Daniel Dennett - unknown
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  • Units of evolution: a metaphysical essay.David L. Hull - 1981 - In Uffe Juul Jensen & Rom Harré (eds.), The Philosophy of evolution. New York: St. Martin's Press. pp. 23--44.
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  • A Mathematical Theory of Communication.Claude Elwood Shannon - 1948 - Bell System Technical Journal 27 (April 1924):379–423.
    The mathematical theory of communication.
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  • Increasingly Radical Claims about Heredity and Fitness.Eugene Earnshaw-Whyte - 2012 - Philosophy of Science 79 (3):396-412.
    On the classical account of evolution by natural selection found in Lewontin and many subsequent authors, ENS is conceived as involving three key ingredients: phenotypic variation, fitness differences, and heredity. Through the analysis of three problem cases involving heredity, I argue that the classical conception is substantially flawed, showing that heredity is not required for selection. I consider further problems with the classical account of ENS arising from conflations between three distinct senses of the central concept of ‘fitness’ and offer (...)
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  • Memes revisited.Kim Sterelny - 2006 - British Journal for the Philosophy of Science 57 (1):145-165.
    In this paper, I argue that the adaptive fit between human cultures and their environment is persuasive evidence that some form of evolutionary mechanism has been important in driving human cultural change. I distinguish three mechanisms of cultural evolution: niche construction leading to cultural group selection; the vertical flow of cultural information from parents to their children, and the replication and spread of memes. I further argue that both cultural group selection and the vertical flow of cultural information have been (...)
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  • The replicator in retrospect.Peter Godfrey-Smith - 2000 - Biology and Philosophy 15 (3):403-423.
    The history and theoretical role of the concept of a ``replicator''is discussed, starting with Dawkins' and Hull's classic treatmentsand working forward. I argue that the replicator concept is still auseful one for evolutionary theory, but it should be revised insome ways. The most important revision is the recognition that notall processes of evolution by natural selection require thatsomething play the role of a replicator.
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  • Development, evolution, and adaptation.Kim Sterelny - 2000 - Philosophy of Science 67 (3):387.
    In this paper I develop three conceptions of the relationship between evolutionary and developmental biology. I further argue that: (a) the choice between them largely turns on as yet unresolved empirical considerations; (b) none of these conceptions demand a fundamental conceptual reevaluation of evolutionary biology; and (c) while developmental systems theorists have constructed an important and innovative alternative to the standard view of the genotype/phenotype relations, in considering the general issue of the relationship between evolutionary and developmental biology, we can (...)
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  • Individuality and Selection.David L. Hull - 1980 - Annual Review of Ecology and Systematics 11:311-332.
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  • The Organism as the Subject and Object of Evolution.Richard C. Lewontin - 1983 - Scientia 77 (18):65.
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  • Genetics and philosophy : an introduction.Paul Griffiths & Karola Stotz - 2013 - Cambridge: Cambridge University Press.
    In the past century, nearly all of the biological sciences have been directly affected by discoveries and developments in genetics, a fast-evolving subject with important theoretical dimensions. In this rich and accessible book, Paul Griffiths and Karola Stotz show how the concept of the gene has evolved and diversified across the many fields that make up modern biology. By examining the molecular biology of the 'environment', they situate genetics in the developmental biology of whole organisms, and reveal how the molecular (...)
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  • Selection without replicators: the origin of genes, and the replicator/interactor distinction in etiobiology.John S. Wilkins, Ian Musgrave & Clem Stanyon - 2012 - Biology and Philosophy 27 (2):215-239.
    Genes are thought to have evolved from long-lived and multiply-interactive molecules in the early stages of the origins of life. However, at that stage there were no replicators, and the distinction between interactors and replicators did not yet apply. Nevertheless, the process of evolution that proceeded from initial autocatalytic hypercycles to full organisms was a Darwinian process of selection of favourable variants. We distinguish therefore between Neo-Darwinian evolution and the related Weismannian and Central Dogma divisions, on the one hand, and (...)
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  • Evolution and the levels of selection.Samir Okasha - 2006 - New York: Oxford University Press.
    Does natural selection act primarily on individual organisms, on groups, on genes, or on whole species? The question of levels of selection - on which biologists and philosophers have long disagreed - is central to evolutionary theory and to the philosophy of biology. Samir Okasha's comprehensive analysis gives a clear account of the philosophical issues at stake in the current debate.
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  • Gene.Paul E. Griffiths & Karola Stotz - 2007 - In David L. Hull & Michael Ruse (eds.), The Cambridge Companion to the Philosophy of Biology. New York: Cambridge University Press.
    The historian Raphael Falk has described the gene as a ‘concept in tension’ (Falk 2000) – an idea pulled this way and that by the differing demands of different kinds of biological work. Several authors have suggested that in the light of contemporary molecular biology ‘gene’ is no more than a handy term which acquires a specific meaning only in a specific scientific context in which it occurs. Hence the best way to answer the question ‘what is a gene’, and (...)
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  • Reinventing molecular weismannism: Information in evolution. [REVIEW]James MacLaurin - 1998 - Biology and Philosophy 13 (1):37-59.
    Molecular Weismannism is the claim that: “In the development of an individual, DNA causes the production both of DNA (genetic material) and of protein (somatic material). The reverse process never occurs. Protein is never a cause of DNA”. This principle underpins both the idea that genes are the objects upon which natural selection operates and the idea that traits can be divided into those that are genetic and those that are not. Recent work in developmental biology and in philosophy of (...)
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  • Individualist and multi-level perspectives on selection in structured populations.Benjamin Kerr & Peter Godfrey-Smith - 2002 - Biology and Philosophy 17 (4):477-517.
    Recent years have seen a renewed debate over the importance of groupselection, especially as it relates to the evolution of altruism. Onefeature of this debate has been disagreement over which kinds ofprocesses should be described in terms of selection at multiple levels,within and between groups. Adapting some earlier discussions, we presenta mathematical framework that can be used to explore the exactrelationships between evolutionary models that do, and those that donot, explicitly recognize biological groups as fitness-bearing entities.We show a fundamental set (...)
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  • The "genetic program" program: A commentary on Maynard Smith on information in biology.Kim Sterelny - 2000 - Philosophy of Science 67 (2):195-201.
    In many texts on evolution the reader will find a characteristic depiction of inheritance and evolution, one showing the generations of an evolving population linked only by a causal flow from genotype to genotype. On this view, the genotype of each organism in this population plays a dual role as both the motor of individual development and as the sole causal channel across the generations. This picture is known to be literally false. In many species, parents exert direct causal influence (...)
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  • Genetic information: A metaphor in search of a theory.Paul Edmund Griffiths - 2001 - Philosophy of Science 68 (3):394-412.
    John Maynard Smith has defended against philosophical criticism the view that developmental biology is the study of the expression of information encoded in the genes by natural selection. However, like other naturalistic concepts of information, this ‘teleosemantic’ information applies to many non-genetic factors in development. Maynard Smith also fails to show that developmental biology is concerned with teleosemantic information. Some other ways to support Maynard Smith’s conclusion are considered. It is argued that on any definition of information the view that (...)
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  • Grains of Description in Biological and Cultural Transmission.Pierrick Bourrat & Mathieu Charbonneau - 2022 - Journal of Cognition and Culture 22 (3-4):185-202.
    The question of whether cultural transmission is faithful has attracted significant debate over the last 30 years. The degree of fidelity with which an object is transmitted depends on 1) the features chosen to be relevant, and 2) the quantity of details given about those features. Once these choices have been made, an object is described at a particular grain. In the absence of conventions between different researchers and across different fields about which grain to use, transmission fidelity cannot be (...)
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  • Folk biology and the anthropology of science: Cognitive universals and cultural particulars.Scott Atran - 1998 - Behavioral and Brain Sciences 21 (4):547-569.
    This essay in the "anthropology of science" is about how cognition constrains culture in producing science. The example is folk biology, whose cultural recurrence issues from the very same domain-specific cognitive universals that provide the historical backbone of systematic biology. Humans everywhere think about plants and animals in highly structured ways. People have similar folk-biological taxonomies composed of essence-based species-like groups and the ranking of species into lower- and higher-order groups. Such taxonomies are not as arbitrary in structure and content, (...)
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  • Developmental Systems and Evolutionary Explanation.P. E. Griffiths & R. D. Gray - 1994 - Journal of Philosophy 91 (6):277-304.
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  • Replicators and vehicles? Or developmental systems?P. E. Griffiths & R. D. Gray - 1994 - Behavioral and Brain Sciences 17 (4):623-624.
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  • Natural selection through survival alone, and the possibility of Gaia.W. Ford Doolittle - 2014 - Biology and Philosophy 29 (3):415-423.
    Here I advance two related evolutionary propositions. (1) Natural selection is most often considered to require competition between reproducing “individuals”, sometimes quite broadly conceived, as in cases of clonal, species or multispecies-community selection. But differential survival of non-competing and non-reproducing individuals will also result in increasing frequencies of survival-promoting “adaptations” among survivors, and thus is also a kind of natural selection. (2) Darwinists have challenged the view that the Earth’s biosphere is an evolved global homeostatic system. Since there is only (...)
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  • From survivors to replicators: evolution by natural selection revisited.Pierrick Bourrat - 2014 - Biology and Philosophy 29 (4):517-538.
    For evolution by natural selection to occur it is classically admitted that the three ingredients of variation, difference in fitness and heredity are necessary and sufficient. In this paper, I show using simple individual-based models, that evolution by natural selection can occur in populations of entities in which neither heredity nor reproduction are present. Furthermore, I demonstrate by complexifying these models that both reproduction and heredity are predictable Darwinian products (i.e. complex adaptations) of populations initially lacking these two properties but (...)
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  • Darwinism without populations: a more inclusive understanding of the “Survival of the Fittest”.Frédéric Bouchard - 2011 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 42 (1):106-114.
    Following Wallace’s suggestion, Darwin framed his theory using Spencer’s expression “survival of the fittest”. Since then, fitness occupies a significant place in the conventional understanding of Darwinism, even though the explicit meaning of the term ‘fitness’ is rarely stated. In this paper I examine some of the different roles that fitness has played in the development of the theory. Whereas the meaning of fitness was originally understood in ecological terms, it took a statistical turn in terms of reproductive success throughout (...)
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  • At last: Serious consideration.David L. Hull, Rodney E. Langman & Sigrid S. Glenn - 2001 - Behavioral and Brain Sciences 24 (3):559-569.
    For a long time, several natural phenomena have been considered unproblematically selection processes in the same sense of “selection.” In our target article we dealt with three of these phenomena: gene-based selection in biological evolution, the reaction of the immune system to antigens, and operant learning. We characterize selection in terms of three processes (variation, replication, and environmental interaction) resulting in the evolution of lineages via differential replication. Our commentators were largely supportive with respect to variation and environmental interaction but (...)
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  • Burying the vehicle.Richard Dawkins - 1994 - Behavioral and Brain Sciences 17 (4):616-617.
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  • (1 other version)The concept of information in biology.John Maynard Smith - 2000 - Philosophy of Science 67 (2):177-194.
    The use of informational terms is widespread in molecular and developmental biology. The usage dates back to Weismann. In both protein synthesis and in later development, genes are symbols, in that there is no necessary connection between their form (sequence) and their effects. The sequence of a gene has been determined, by past natural selection, because of the effects it produces. In biology, the use of informational terms implies intentionality, in that both the form of the signal, and the response (...)
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  • Development, culture, and the units of inheritance.James Griesemer - 2000 - Philosophy of Science 67 (3):368.
    Developmental systems theory (DST) expands the unit of replication from genes to whole systems of developmental resources, which DST interprets in terms of cycling developmental processes. Expansion seems required by DST's argument against privileging genes in evolutionary and developmental explanations of organic traits. DST and the expanded replicator brook no distinction between biological and cultural evolution. However, by endorsing a single expanded unit of inheritance and leaving the classical molecular notion of gene intact, DST achieves only a nominal reunification of (...)
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  • Information, arbitrariness, and selection: Comments on Maynard Smith.Peter Godfrey-Smith - 2000 - Philosophy of Science 67 (2):202-207.
    Maynard Smith is right that one of the most striking features of contemporary biology is the ever-increasing prominence of the concept of information, along with related concepts like representation, programming, and coding. Maynard Smith is also right that this is surely a phenomenon which philosophers of science should examine closely. We should try to understand exactly what sorts of theoretical commitment are made when biological systems are described in these terms, and what connection there is between semantic descriptions in biology (...)
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  • Evolution by means of natural selection without reproduction: revamping Lewontin’s account.François Papale - 2020 - Synthese 198 (11):10429-10455.
    This paper analyzes recent attempts to reject reproduction with lineage formation as a necessary condition for evolution by means of natural selection :560–570, 2008; Stud Hist Philos Sci Part C Stud Hist Philos Biol Biomed Sci 42:106–114, 2011; Bourrat in Biol Philos 29:517–538, 2014; Br J Philos Sci 66:883–903, 2015; Charbonneau in Philos Sci 81:727–740, 2014; Doolittle and Inkpen in Proc Natl Acad Sci 115:4006–4014, 2018). Building on the strengths of these attempts and avoiding their pitfalls, it is argued that (...)
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  • In What Sense Can There Be Evolution by Natural Selection Without Perfect Inheritance?Pierrick Bourrat - 2019 - International Studies in the Philosophy of Science 32 (1):13-31.
    ABSTRACTIn Darwinian Population and Natural Selection, Peter Godfrey-Smith brought the topic of natural selection back to the forefront of philosophy of biology, highlighting different issues surro...
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  • Natural selection and the reference grain problem.Pierrick Bourrat - 2020 - Studies in History and Philosophy of Science Part A 80:1-8.
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