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  1. Biological complexity and the dynamics of life processes.Jacques Ricard - 1999 - New York: Elsevier.
    The aim of this book is to show how supramolecular complexity of cell organization can dramatically alter the functions of individual macromolecules within a cell. The emergence of new functions which appear as a consequence of supramolecular complexity, is explained in terms of physical chemistry. The book is interdisciplinary, at the border between cell biochemistry, physics and physical chemistry. This interdisciplinarity does not result in the use of physical techniques but from the use of physical concepts to study biological problems. (...)
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  • Role functions, mechanisms, and hierarchy.Carl F. Craver - 2001 - Philosophy of Science 68 (1):53-74.
    Many areas of science develop by discovering mechanisms and role functions. Cummins' (1975) analysis of role functions-according to which an item's role function is a capacity of that item that appears in an analytic explanation of the capacity of some containing system-captures one important sense of "function" in the biological sciences and elsewhere. Here I synthesize Cummins' account with recent work on mechanisms and causal/mechanical explanation. The synthesis produces an analysis of specifically mechanistic role functions, one that uses the characteristic (...)
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  • Sex and Death: An Introduction to Philosophy of Biology.Kim Sterelny & Paul Edmund Griffiths - 1999 - Chicago and London: The University of Chicago Press.
    Is the history of life a series of accidents or a drama scripted by selfish genes? Is there an “essential” human nature, determined at birth or in a distant evolutionary past? What should we conserve—species, ecosystems, or something else? -/- Informed answers to questions like these, critical to our understanding of ourselves and the world around us, require both a knowledge of biology and a philosophical framework within which to make sense of its findings. In this accessible introduction to philosophy (...)
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  • The Language of Thought.Jerry A. Fodor - 1975 - Harvard University Press.
    INTRODUCTION: TWO KINDS OF RLDUCTIONISM The man who laughs is the one who has not yet heard the terrible news. BERTHOLD BRECHT I propose, in this book, ...
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  • Emergence as non-aggregativity and the biases of reductionisms.William C. Wimsatt - 2000 - Foundations of Science 5 (3):269-297.
    Most philosophical accounts of emergence are incompatible with reduction. Most scientists regard a system property as emergent relative to properties of its parts if it depends upon their mode of organization-a view consistent with reduction. Emergence is a failure of aggregativity, in which ``the whole is nothing more than the sum of its parts''. Aggregativity requires four conditions, giving powerful tools for analyzing modes of organization. Differently met for different decompositions of the system, and in different degrees, the structural conditions (...)
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  • Emergence, supervenience, and realization.Rex Welshon - 2002 - Philosophical Studies 108 (1-2):39-51.
    In the first section of this paper, I articulate Jaegwon Kim's argument against emergent down ward causation. In the second section, I canvas four responses to Kim's argument and argue that each fails. In the third section, I show that emergent downward causation does not, contra Kim, entail overdetermination. I argue that supervenience of emergent upon base properties is not sufficient for nomological causal relationsbetween emergent and base properties. What sustains Kim's argument is rather the claim that emergent properties realized (...)
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  • Genes made molecular.C. Kenneth Waters - 1994 - Philosophy of Science 61 (2):163-185.
    This paper investigates what molecular biology has done for our understanding of the gene. I base a new account of the gene concept of classical genetics on the classical dogma that gene differences cause phenotypic differences. Although contemporary biologists often think of genes in terms of this concept, molecular biology provides a second way to understand genes. I clarify this second way by articulating a molecular gene concept. This concept unifies our understanding of the molecular basis of a wide variety (...)
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  • Can a reductionist be a pluralist?Daniel Steel - 2004 - Biology and Philosophy 19 (1):55-73.
    Pluralism is often put forth as a counter-position to reductionism. In this essay, I argue that reductionism and pluralism are in fact consistent. I propose that there are several potential goals for reductions and that the proper form of a reduction should be considered in tandem with the goal that it aims to achieve. This insight provides a basis for clarifying what version of reductionism are currently defended, for explicating the notion of a fundamental level of explanation, and for showing (...)
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  • The multiple realizability argument against reductionism.Elliott Sober - 1999 - Philosophy of Science 66 (4):542-564.
    Reductionism is often understood to include two theses: (1) every singular occurrence that the special sciences can explain also can be explained by physics; (2) every law in a higher-level science can be explained by physics. These claims are widely supposed to have been refuted by the multiple realizability argument, formulated by Putnam (1967, 1975) and Fodor (1968, 1975). The present paper criticizes the argument and identifies a reductionistic thesis that follows from one of the argument's premises.
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  • Kim on Emergence.Sydney Shoemaker - 2002 - Philosophical Studies 108 (1-2):53-63.
    Emergence requires that the ultimate physical micro-entities have “micro-latent” causal powers, which manifest themselves only when the entities are combined in ways that are “emergence-engendering,” in addition to the “micro-manifest” powers that account for their behavior in other circumstances. Subjects of emergent properties will have emergent micro-structural properties, specified partly in terms of these micro-latent powers, each of which will be determined by a micro-structural property specified only in terms of the micro-manifest powers of the constituents and the way they (...)
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  • Robust supervenience and emergence.Alexander Rueger - 2000 - Philosophy of Science 67 (3):466-491.
    Non-reductive physicalists have made a number of attempts to provide the relation of supervenience between levels of properties with enough bite to analyze interesting cases without at the same time losing the relation's acceptability for the physicalist. I criticize some of these proposals and suggest an alternative supplementation of the supervenience relation by imposing a requirement of robustness which is motivated by the notion of structural stability familiar from dynamical systems theory. Robust supervenience, I argue, captures what the non-reductive physicalist (...)
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  • Physical emergence, diachronic and synchronic.Alexander Rueger - 2000 - Synthese 124 (3):297-322.
    This paper explicates two notions of emergencewhich are based on two ways of distinguishinglevels of properties for dynamical systems.Once the levels are defined, the strategies ofcharacterizing the relation of higher level to lower levelproperties as diachronic and synchronic emergenceare the same. In each case, the higher level properties aresaid to be emergent if they are novel or irreducible with respect to the lower level properties. Novelty andirreducibility are given precise meanings in terms of the effectsthat the change of a bifurcation (...)
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  • The Structure of Biological Science.Fred Gifford - 1991 - Noûs 25 (1):123-125.
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  • Reductionism redux: Computing the embryo. [REVIEW]Alex Rosenberg - 1997 - Biology and Philosophy 12 (4):445-470.
    This paper argues that the consensus physicalist antireductionism in the philosophy of biology cannot accommodate the research strategy or indeed the recent findings of molecular developmental biology. After describing Wolperts programmatic claims on its behalf, and recent work by Gehring and others to identify the molecular determinants of development, the paper attempts to identify the relationship between evolutionary and developmental biology by reconciling two apparently conflicting accounts of bio-function – Wrights and Nagels (as elaborated by Cummins). Finally, the paper seeks (...)
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  • How is biological explanation possible?Alex Rosenberg - 2001 - British Journal for the Philosophy of Science 52 (4):735-760.
    That biology provides explanations is not open to doubt. But how it does so must be a vexed question for those who deny that biology embodies laws or other generalizations with the sort of explanatory force that the philosophy of science recognizes. The most common response to this problem has involved redefining law so that those grammatically general statements which biologists invoke in explanations can be counted as laws. But this terminological innovation cannot identify the source of biology's explanatory power. (...)
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  • Ceteris paribus — an inadequate representation for biological contingency.Sandra D. Mitchell - 2002 - Erkenntnis 57 (3):329-350.
    It has been claimed that ceteris paribus laws, rather than strict laws are the proper aim of the special sciences. This is so because the causal regularities found in these domains are exception-ridden, being contingent on the presence of the appropriate conditions and the absence of interfering factors. I argue that the ceteris paribus strategy obscures rather than illuminates the important similarities and differences between representations of causal regularities in the exact and inexact sciences. In particular, a detailed account of (...)
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  • Thinking about mechanisms.Peter Machamer, Lindley Darden & Carl F. Craver - 2000 - Philosophy of Science 67 (1):1-25.
    The concept of mechanism is analyzed in terms of entities and activities, organized such that they are productive of regular changes. Examples show how mechanisms work in neurobiology and molecular biology. Thinking in terms of mechanisms provides a new framework for addressing many traditional philosophical issues: causality, laws, explanation, reduction, and scientific change.
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  • How molecular is molecular developmental biology? A reply to Alex Rosenberg's reductionism redux: Computing the embryo. [REVIEW]Manfred D. Laubichler & Günter P. Wagner - 2001 - Biology and Philosophy 16 (1):53-68.
    This paper argues in defense of theanti-reductionist consensus in the philosophy ofbiology. More specifically, it takes issues with AlexRosenberg's recent challenge of this position. Weargue that the results of modern developmentalgenetics rather than eliminating the need forfunctional kinds in explanations of developmentactually reinforce their importance.
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  • Microdeterminism and concepts of emergence.Robert L. Klee - 1984 - Philosophy of Science 51 (March):44-63.
    Contemporary scientific theories assume a primarily micro-deterministic view of nature. This paper explores the question of whether micro-determinism is incompatible with the alleged emergence of properties and laws that some biologists and philosophers assert occurs in various biological systems. I argue that a preferable unified treatment of these emergence claims takes properties, rather than laws, to be the units of emergence. Four distinct conceptions of emergence are explored and three shown to be compatible with micro-determinism. The remaining concept of emergence, (...)
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  • The hegemony of molecular biology.Philip Kitcher - 1999 - Biology and Philosophy 14 (2):195-210.
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  • 1953 and all that. A tale of two sciences.Philip Kitcher - 1984 - Philosophical Review 93 (3):335-373.
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  • Reduction, explanation, and individualism.Harold Kincaid - 1986 - Philosophy of Science 53 (4):492-513.
    This paper contributes to the recently renewed debate over methodological individualism (MI) by carefully sorting out various individualist claims and by making use of recent work on reduction and explanation outside the social sciences. My major focus is on individualist claims about reduction and explanation. I argue that reductionist versions of MI fail for much the same reasons that mental predicates cannot be reduced to physical predicates and that attempts to establish reducibility by weakening the requirements for reduction also fail. (...)
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  • Molecular biology and the unity of science.Harold Kincaid - 1990 - Philosophy of Science 57 (4):575-593.
    Advances in molecular biology have generally been taken to support the claim that biology is reducible to chemistry. I argue against that claim by looking in detail at a number of central results from molecular biology and showing that none of them supports reduction because (1) their basic predicates have multiple realizations, (2) their chemical realization is context-sensitive and (3) their explanations often presuppose biological facts rather than eliminate them. I then consider the heuristic and confirmational implications of irreducibility and (...)
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  • Understanding development.Evelyn Fox Keller - 1999 - Biology and Philosophy 14 (3):321-330.
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  • Mechanisms and the nature of causation.Stuart S. Glennan - 1996 - Erkenntnis 44 (1):49--71.
    In this paper I offer an analysis of causation based upon a theory of mechanisms-complex systems whose internal parts interact to produce a system's external behavior. I argue that all but the fundamental laws of physics can be explained by reference to mechanisms. Mechanisms provide an epistemologically unproblematic way to explain the necessity which is often taken to distinguish laws from other generalizations. This account of necessity leads to a theory of causation according to which events are causally related when (...)
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  • How to be an anti-reductionist about developmental biology: Response to Laubichler and Wagner.Greg Frost-Arnold - 2004 - Biology and Philosophy 19 (1):75-91.
    Alexander Rosenberg recently claimed (1997) that developmental biology is currently being reduced to molecular biology. cite several concrete biological examples that are intended to impugn Rosenberg's claim. I first argue that although Laubichler and Wagner's examples would refute a very strong reductionism, a more moderate reductionism would escape their attacks. Next, taking my cue from the antireductionist's perennial stress on the importance of spatial organization, I describe one form an empirical finding that refutes this moderate reductionism would take. Finally, I (...)
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  • Explaining emergence: Toward an ontology of levels. [REVIEW]Claus Emmeche, Simo Koppe & Frederick Stjernfelt - 1997 - Journal for General Philosophy of Science / Zeitschrift für Allgemeine Wissenschaftstheorie 28 (1):83-119.
    University of Copenhagen University of Copenhagen University of Copenhagen Blegdamsvej 17 Njalsgade 80 Njalsgade 80 DK-2100 Copenhagen Ø DK 2300 Copenhagen S DK-2300 Copenhagen S Denmark.
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  • Discovering Complexity: Decomposition and Localization as Strategies in Scientific Research.William Bechtel & Robert C. Richardson - 2010 - Princeton.
    An analysis of two heuristic strategies for the development of mechanistic models, illustrated with historical examples from the life sciences. In Discovering Complexity, William Bechtel and Robert Richardson examine two heuristics that guided the development of mechanistic models in the life sciences: decomposition and localization. Drawing on historical cases from disciplines including cell biology, cognitive neuroscience, and genetics, they identify a number of "choice points" that life scientists confront in developing mechanistic explanations and show how different choices result in divergent (...)
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  • The Growth of Biological Thought: Diversity, Evolution, and Inheritance.Ernst Mayr - 1982 - Harvard University Press.
    Explores the development of the ideas of evolutionary biology, particularly as affected by the increasing understanding of genetics and of the chemical basis of inheritance.
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  • Discovery and explanation in biology and medicine.Kenneth F. Schaffner - 1993 - Chicago: University of Chicago Press.
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  • The common mind: an essay on psychology, society, and politics.Philip Pettit - 1993 - New York: Oxford University Press.
    What makes human beings intentional and thinking subjects? How does their intentionality and thought connect with their social nature and their communal experience? How do the answers to these questions shape the assumptions which it is legitimate to make in social explanation and political evaluation? These are the broad-ranging issues which Pettit addresses in this novel study. The Common Mind argues for an original way of marking off thinking subjects, in particular human beings, from other intentional systems, natural and artificial. (...)
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  • Exploring Complexity: An Introduction.G. Nicolis & Ilya Prigogine - 1989 - W H Freeman & Company.
    Unexpected discoveries in nonequilibrium physics and nonlinear dynamics are changing our understanding of complex phenomena. Recent research has revealed fundamental new properties of matter in far-from-equilibrium conditions, and the prevalence of instability-where small changes in initial conditions may lead to amplified effects.
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  • The Language of Thought.J. A. Fodor - 1978 - Critica 10 (28):140-143.
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  • The Structure of Biological Science.Alexander Rosenberg - 1985 - New York: Cambridge University Press.
    This book provides a comprehensive guide to the conceptual methodological, and epistemological problems of biology, and treats in depth the major developments in molecular biology and evolutionary theory that have transformed both biology and its philosophy in recent decades. At the same time the work is a sustained argument for a particular philosophy of biology that unifies disparate issues and offers a framework for expectations about the future directions of the life sciences. The argument explores differences between autonomist and anti-autonomist (...)
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  • Sex and Death: An Introduction to Philosophy of Biology. [REVIEW]Mohan Matthen - 2002 - Philosophical Books 43 (1):78-80.
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  • Individualism and the Unity of Science: Essays on Reduction, Explanation and the Special Sciences (Steve Clarke).H. Kincaid - 1999 - Australasian Journal of Philosophy 77 (4):518-518.
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  • Unity of Science as a Working Hypothesis.Paul Oppenheim & Hilary Putnam - 1958 - Minnesota Studies in the Philosophy of Science 2:3-36.
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  • Discovery and Explanation in Biology and Medicine.Kenneth F. Schaffner - 1995 - British Journal for the Philosophy of Science 46 (4):621-623.
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  • The Structure of Biological Science.Alexander Rosenberg - 1987 - British Journal for the Philosophy of Science 38 (1):119-121.
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  • The Structure of Biological Science.Alexander Rosenberg - 1986 - Journal of the History of Biology 19 (1):161-162.
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  • Discovery and Explanation in Biology and Medicine.Kenneth F. Schaffner - 1995 - Journal of the History of Biology 28 (1):172-174.
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  • Grene on Mechanism and Reductionism: More Than Just a Side Issue.Robert N. Brandon - 1984 - PSA: Proceedings of the Biennial Meeting of the Philosophy of Science Association 1984:345 - 353.
    In this paper the common association between ontological reductionism and a methodological position called 'Mechanism' is discussed. Three major points are argued for: (1) Mechanism is not to be identified with reductionism in any of its forms; in fact, mechanism leads to a non-reductionist ontology. (2) Biological methodology is thoroughly mechanistic. (3) Mechanism is compatible with at least one form of teleology. Along the way the nature and value of scientific explanations, some recent controversies in biology and why reductionism has (...)
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