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  1. Functional homology and homology of function: Biological concepts and philosophical consequences.Alan C. Love - 2007 - Biology and Philosophy 22 (5):691-708.
    “Functional homology” appears regularly in different areas of biological research and yet it is apparently a contradiction in terms—homology concerns identity of structure regardless of form and function. I argue that despite this conceptual tension there is a legitimate conception of ‘homology of function’, which can be recovered by utilizing a distinction from pre-Darwinian physiology (use versus activity) to identify an appropriate meaning of ‘function’. This account is directly applicable to molecular developmental biology and shares a connection to the theme (...)
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  • Darwinism, Memes, and Creativity: A Critique of Darwinian Analogical Reasoning from Nature to Culture.Maria Kronfeldner - 2007 - Dissertation, University of Regensburg
    The dissertation criticizes two analogical applications of Darwinism to the spheres of mind and culture: the Darwinian approach to creativity and memetics. These theories rely on three basic analogies: the ontological analogy states that the basic ontological units of culture are so-called memes, which are replicators like genes; the origination analogy states that novelty in human creativity emerges in a "blind" Darwinian manner; and the explanatory units of selection analogy states that memes are "egoistic" and that they can spread independently (...)
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  • Brazilian Studies in Philosophy and History of Science: An Account of Recent Works.Décio Krause & Antonio Videira (eds.) - 2010 - Dordrecht, Netherland: Springer.
    This volume, The Brazilian Studies in the Philosophy and History of Science, is the first attempt to present to a general audience, works from Brazil on this subject. The included papers are original, covering a remarkable number of relevant topics of philosophy of science, logic and on the history of science. The Brazilian community has increased in the last years in quantity and in quality of the works, most of them being published in respectable international journals on the subject. The (...)
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  • Teleology and the Meaning of Life.Osamu Kiritani - 2012 - Journal of Mind and Behavior 33 (1-2):97-102.
    The “units of selection” debate in philosophy of biology addresses which entity benefits from natural selection. Nanay has tried to explain why we are obsessed with the question about the meaning of life, using the notion of group selection, although he is skeptical about answering the question from a biological point of view. The aim of this paper is to give a biological explanation to the meaning of life. I argue that the meaning of life is survival and reproduction, appealing (...)
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  • Special Issue: Philosophical Considerations in the Teaching of Biology. Part II, Evolution, Development and Genetics.Kostas Kampourakis (ed.) - 2013 - Springer (Science & Education).
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  • Function and Teleology.Justin Garson - 2008 - In Sahorta Sarkar & Anya Plutynski (eds.), Companion to the Philosophy of Biology. Blackwell. pp. 525-549.
    This is a short overview of the biological functions debate in philosophy. While it was fairly comprehensive when it was written, my short book ​A Critical Overview of Biological Functions has largely supplanted it as a definitive and up-to-date overview of the debate, both because the book takes into account new developments since then, and because the length of the book allowed me to go into substantially more detail about existing views.
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  • Artificial life and ‘nature’s purposes’: The question of behavioral autonomy.Elena Popa - 2019 - Human Affairs 30 (4):587-596.
    This paper investigates the concept of behavioral autonomy in Artificial Life by drawing a parallel to the use of teleological notions in the study of biological life. Contrary to one of the leading assumptions in Artificial Life research, I argue that there is a significant difference in how autonomous behavior is understood in artificial and biological life forms: the former is underlain by human goals in a way that the latter is not. While behavioral traits can be explained in relation (...)
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  • Robust processes and teleological language.Jonathan Birch - 2012 - European Journal for Philosophy of Science 2 (3):299-312.
    I consider some hitherto unexplored examples of teleological language in the sciences. In explicating these examples, I aim to show (a) that such language is not the sole preserve of the biological sciences, and (b) that not all such talk is reducible to the ascription of functions. In chemistry and biochemistry, scientists explaining molecular rearrangements and protein folding talk informally of molecules rearranging “in order to” maximize stability. Evolutionary biologists, meanwhile, often speak of traits evolving “in order to” optimize some (...)
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  • Prussian Reproduction, Proper Function and Infertile Marriages.David B. Hershenov - 2015 - Roczniki Filozoficzne 63 (3):129-141.
    Alex Pruss argues that romantic love is a basic form of human love that is properly fulfilled in sex oriented towards reproduction. As a result, homoerotic sexual activity cannot obtain the proper consummation and therefore involves misunderstanding the other person’s nature and the possibility of union with them. Although same-sex sexual activity may feel like a consummation of romantic love, it is wrong to generate such a false experience in oneself or another. Presented is an apparent dilemma for Pruss’s thesis (...)
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  • No wisdom in the crowd: genome annotation at the time of big data - current status and future prospects.Antoine Danchin - 2018 - Microbial Biotechnology 11 (4):588-605.
    Science and engineering rely on the accumulation and dissemination of knowledge to make discoveries and create new designs. Discovery-driven genome research rests on knowledge passed on via gene annotations. In response to the deluge of sequencing big data, standard annotation practice employs automated procedures that rely on majority rules. We argue this hinders progress through the generation and propagation of errors, leading investigators into blind alleys. More subtly, this inductive process discourages the discovery of novelty, which remains essential in biological (...)
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  • Natural Kinds as Scientific Models.Luiz Henrique Dutra - 2011 - Boston Studies in the Philosophy of Science 290:141-150.
    The concept of natural kind is center stage in the debates about scientific realism. Champions of scientific realism such as Richard Boyd hold that our most developed scientific theories allow us to “cut the world at its joints” (Boyd, 1981, 1984, 1991). In the long run we can disclose natural kinds as nature made them, though as science progresses improvements in theory allow us to revise the extension of natural kind terms.
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  • Kin Selection: A Philosophical Analysis.Jonathan Birch - 2013 - Dissertation, University of Cambridge
    This PhD dissertation examines the conceptual and theoretical foundations of the most general and most widely used framework for understanding social evolution, W. D. Hamilton's theory of kin selection. While the core idea is intuitive enough (when organisms share genes, they sometimes have an evolutionary incentive to help one another), its apparent simplicity masks a host of conceptual subtleties, and the theory has proved a perennial source of controversy in evolutionary biology. To move towards a resolution of these controversies, we (...)
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  • The Current Status of the Philosophy of Biology.Peter Takacs & Michael Ruse - 2013 - Science & Education 22 (1):5-48.
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  • Social Evolution, Progress and Teleology in Spencer's Synthetic Philosophy and Freudian Psychoanalysis.L. Nascimento - forthcoming - History of the Human Sciences.
    This article aims to compare notions of progress and evolution in the social theories of Freud and Spencer. It argues 1) that the two authors had similarly complex theories that contained mixed elements of positivism and teleology; 2) In its positivist elements, both authors made use of unified natural laws and, in its teleological aspect, they made use of notions of final cause in that progress and the evolution of civilization was understood as a linear path of progressive development with (...)
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  • EXPLICAÇÕES TELEOLÓGICAS E FUNCIONAIS EM LIVROS DIDÁTICOS DE BIOLOGIA DO ENSINO MÉDIO.Ricardo Santos do Carmo - 2010 - Dissertation, Universidade Federal da Bahia, Brazil
    Neste trabalho, avaliamos as implicações que o debate filosófico acerca das explicações em termos de função e objetivo podem ter no contexto educacional, particularmente no ensino e aprendizagem de biologia. Para alcançar este objetivo, investigamos como três obras didáticas de biologia do Brasil utilizam a linguagem teleológica na formulação de explicações para os assuntos que são objeto de estudo dessa ciência. Na análise das obras, exploramos os enunciados teleológicos e funcionais a partir de dois projetos explanatórios discutidos na filosofia da (...)
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  • Function, homology and character individuation.Paul E. Griffiths - 2006 - Philosophy of Science 73 (1):1-25.
    I defend the view that many biological categories are defined by homology against a series of arguments designed to show that all biological categories are defined, at least in part, by selected function. I show that categories of homology are `abnormality inclusive'—something often alleged to be unique to selected function categories. I show that classifications by selected function are logically dependent on classifications by homology, but not vice-versa. Finally, I reject the view that biologists must use considerations of selected function (...)
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  • Normative reasons as good bases.Alex Gregory - 2016 - Philosophical Studies 173 (9):2291-2310.
    In this paper, I defend a new theory of normative reasons called reasons as good bases, according to which a normative reason to φ is something that is a good basis for φing. The idea is that the grounds on which we do things—bases—can be better or worse as things of their kind, and a normative reason—a good reason—is something that is just a good instance of such a ground. After introducing RGB, I clarify what it is to be a (...)
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  • Epistemic Entitlement.Peter J. Graham - 2012 - Noûs 46 (3):449-482.
    What is the best account of process reliabilism about epistemic justification, especially epistemic entitlement? I argue that entitlement consists in the normal functioning (proper operation) of the belief-forming process when the process has forming true beliefs reliably as an etiological function. Etiological functions involve consequence explanation: a belief-forming process has forming true beliefs reliably as a function just in case forming-true beliefs reliably partly explains the persistence of the process. This account paves the way for avoiding standard objections to process (...)
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  • A mechanistic framework for Darwinism or why Fodor’s objection fails.Fermín Fulda - 2015 - Synthese 192 (1):163-183.
    Fodor argue that Darwinism cannot be true on the grounds that there are no laws of selection to support counterfactuals about why traits are selected-for. Darwinian explanations, according to this objection, amount to mere ‘plausible historical narratives’. I argue that the objection is predicated on two problematic assumptions: A nomic-subsumption account of causation and causal explanation, and a fine-grained view of the individuation of selected-for effects. Against the former, I argue that Darwinian explanations are a historical species of mechanistic explanation (...)
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  • The chicken and the Orphean egg.Claus Emmeche - 2002 - Sign Systems Studies 30 (1):15-31.
    A central aspect of the relation between biosemiotics and biology is investigated by asking: Is a biological concept of function intrinsically related to a biosemiotic concept of sign action, and vice versa? A biological notion of function (as some process or part that serves some purpose in the context of maintenance and reproduction of the whole organism) is discussed in the light of the attempt to provide an understanding of life processes as being of a semiotic nature, i.e., constituted by (...)
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  • Function, role and disposition in Basic Formal Ontology.Robert Arp & Barry Smith - 2008 - Proceedings of Bio-Ontologies Workshop, Intelligent Systems for Molecular Biology (ISMB), Toronto.
    Numerous research groups are now utilizing Basic Formal Ontology as an upper-level framework to assist in the organization and integration of biomedical information. This paper provides elucidation of the three existing BFO subcategories of realizable entity, namely function, role, and disposition. It proposes one further sub-category of tendency, and considers the merits of recognizing two sub-categories of function for domain ontologies, namely, artifactual and biological function. The motivation is to help advance the coherent ontological treatment of functions, roles, and dispositions, (...)
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  • Pluralism in evolutionary controversies: styles and averaging strategies in hierarchical selection theories.Rasmus Grønfeldt Winther, Michael J. Wade & Christopher C. Dimond - 2013 - Biology and Philosophy 28 (6):957-979.
    Two controversies exist regarding the appropriate characterization of hierarchical and adaptive evolution in natural populations. In biology, there is the Wright-Fisher controversy over the relative roles of random genetic drift, natural selection, population structure, and interdemic selection in adaptive evolution begun by Sewall Wright and Ronald Aylmer Fisher. There is also the Units of Selection debate, spanning both the biological and the philosophical literature and including the impassioned group-selection debate. Why do these two discourses exist separately, and interact relatively little? (...)
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  • Problems of representation II: naturalizing content.Dan Ryder - 2009 - In Francisco Garzon & John Symons (eds.), Routledge Companion to the Philosophy of Psychology. Routledge.
    John is currently thinking that the sun is bright. Consider his occurrent belief or judgement that the sun is bright. Its content is that the sun is bright. This is a truth- evaluable content (which shall be our main concern) because it is capable of being true or false. In virtue of what natural, scientifically accessible facts does John’s judgement have this content? To give the correct answer to that question, and to explain why John’s judgement and other contentful mental (...)
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  • Why do humans reason? Arguments for an argumentative theory.Dan Sperber - 2011 - Behavioral and Brain Sciences 34 (2):57.
    Short abstract (98 words). Reasoning is generally seen as a means to improve knowledge and make better decisions. However, much evidence shows that reasoning often leads to epistemic distortions and poor decisions. This suggests that the function of reasoning should be rethought. Our hypothesis is that the function of reasoning is argumentative. It is to devise and evaluate arguments intended to persuade. Reasoning so conceived is adaptive given humans’ exceptional dependence on communication and vulnerability to misinformation. A wide range of (...)
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  • (1 other version)Paul Sheldon Davies, Norms of Nature: Naturalism and the Nature of Function. A Bradford Book. Cambridge, Mass.: MIT Press, 2001; Peter McLaughlin, What Functions Explain: Functional Explanation and Self-Reproducing Systems. Cambridge: Cambridge University Press, 2001; Del Ratzsch, Nature, Design, and Science: The Status of Design in Natural Science. Albany: State University of New York Press, 2001. [REVIEW]Matthew Ratcliffe - 2003 - Metascience 12 (3):312-321.
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  • An organizational account of biological functions.Matteo Mossio, Cristian Saborido & Alvaro Moreno - 2009 - British Journal for the Philosophy of Science 60 (4):813-841.
    In this paper, we develop an organizational account that defines biological functions as causal relations subject to closure in living systems, interpreted as the most typical example of organizationally closed and differentiated self-maintaining systems. We argue that this account adequately grounds the teleological and normative dimensions of functions in the current organization of a system, insofar as it provides an explanation for the existence of the function bearer and, at the same time, identifies in a non-arbitrary way the norms that (...)
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  • What is menstruation for? On the projectibility of functional predicates in menstruation research.S. Clough - 2002 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 33 (4):719-732.
    In 1993, biologist Margie Profet captured the attention of the popular press with the publication of her radical thesis: menstruation has a function. Traditional theories, she claims, typically view menstruation as a functionless by-product of cyclic flux. The details of Profet's functional account are similarly radical: she argues that menstruation has been naturally selected to defend the female reproductive tract from sperm-borne pathogens. There are a number of weaknesses in Profet's evolutionary analysis. However, I focus on a set of pragmatic (...)
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  • Computational modeling vs. computational explanation: Is everything a Turing machine, and does it matter to the philosophy of mind?Gualtiero Piccinini - 2007 - Australasian Journal of Philosophy 85 (1):93 – 115.
    According to pancomputationalism, everything is a computing system. In this paper, I distinguish between different varieties of pancomputationalism. I find that although some varieties are more plausible than others, only the strongest variety is relevant to the philosophy of mind, but only the most trivial varieties are true. As a side effect of this exercise, I offer a clarified distinction between computational modelling and computational explanation.<br><br>.
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  • Computers.Gualtiero Piccinini - 2008 - Pacific Philosophical Quarterly 89 (1):32–73.
    I offer an explication of the notion of computer, grounded in the practices of computability theorists and computer scientists. I begin by explaining what distinguishes computers from calculators. Then, I offer a systematic taxonomy of kinds of computer, including hard-wired versus programmable, general-purpose versus special-purpose, analog versus digital, and serial versus parallel, giving explicit criteria for each kind. My account is mechanistic: which class a system belongs in, and which functions are computable by which system, depends on the system's mechanistic (...)
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  • The function debate in philosophy.Arno Wouters - 2005 - Acta Biotheoretica 53 (2):123-151.
    This paper reviews the debate on the notion of biological function and on functional explanation as this takes place in philosophy. It describes the different perspectives, issues, intuitions, theories and arguments that have emerged. The author shows that the debate has been too heavily influenced by the concerns of a naturalistic philosophy of mind and argues that in order to improve our understanding of biology the attention should be shifted from the study of intuitions to the study of the actual (...)
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  • Parts and theories in compositional biology.Rasmus Grønfeldt Winther - 2006 - Biology and Philosophy 21 (4):471-499.
    I analyze the importance of parts in the style of biological theorizing that I call compositional biology. I do this by investigating various aspects, including partitioning frames and explanatory accounts, of the theoretical perspectives that fall under and are guided by compositional biology. I ground this general examination in a comparative analysis of three different disciplines with their associated compositional theoretical perspectives: comparative morphology, functional morphology, and developmental biology. I glean data for this analysis from canonical textbooks and defend the (...)
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  • Nativism in cognitive science.Richard Samuels - 2002 - Mind and Language 17 (3):233-65.
    Though nativist hypotheses have played a pivotal role in the development of cognitive science, it remains exceedingly obscure how they—and the debates in which they figure—ought to be understood. The central aim of this paper is to provide an account which addresses this concern and in so doing: a) makes sense of the roles that nativist theorizing plays in cognitive science and, moreover, b), explains why it really matters to the contemporary study of cognition. I conclude by outlining a range (...)
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  • Computing mechanisms.Gualtiero Piccinini - 2007 - Philosophy of Science 74 (4):501-526.
    This paper offers an account of what it is for a physical system to be a computing mechanism—a system that performs computations. A computing mechanism is a mechanism whose function is to generate output strings from input strings and (possibly) internal states, in accordance with a general rule that applies to all relevant strings and depends on the input strings and (possibly) internal states for its application. This account is motivated by reasons endogenous to the philosophy of computing, namely, doing (...)
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  • Will a stroke of neuroscience ever eradicate evil?Ronald de Sousa & Douglas Heinrichs - 2010 - In Luca Malatesti & John McMillan (eds.), Responsibility and Psychopathy: Interfacing Law, Psychiatry and Philosophy. Oxford University Press.
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  • Existentialism as Biology.Ronald de Sousa - 2010 - Emotion Review 2 (1):76-83.
    Existentialism is compatible with a broadly biological vision of who we are. This thesis is grounded in an analysis of “concrete” or “individual” possibility, which differs from standard conceptions of possibility in that it allows for possibilities to come into being or disappear through time. Concrete possibilities are introduced both in individual life and by major transitions in evolution. In particular, the advent of ultrasociality and of language has enabled human goals to be formulated in partial independence from the vestigial (...)
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  • Minimal models and canonical neural computations: the distinctness of computational explanation in neuroscience.M. Chirimuuta - 2014 - Synthese 191 (2):127-153.
    In a recent paper, Kaplan (Synthese 183:339–373, 2011) takes up the task of extending Craver’s (Explaining the brain, 2007) mechanistic account of explanation in neuroscience to the new territory of computational neuroscience. He presents the model to mechanism mapping (3M) criterion as a condition for a model’s explanatory adequacy. This mechanistic approach is intended to replace earlier accounts which posited a level of computational analysis conceived as distinct and autonomous from underlying mechanistic details. In this paper I discuss work in (...)
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  • El viviente y su medio: antes y después de Darwin.Gustavo Caponi - 2006 - Scientiae Studia 4 (1):9-43.
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  • El pragmatismo biológico de las creencias.Miguel Cabrera Machado - 2019 - Caracas: Amazon.
    La teleosemántica es una teoría teleológica de las representaciones mentales, propugnada por David Papineau, que tiene como propósito ofrecer una explicación naturalista y evolucionista de dichas representaciones, en particular de las creencias. Mi objetivo será analizar las creencias y su relación con la verdad en la obra de Papineau. Según Papineau, los contenidos y las representaciones mentales, específicamente las creencias, cumplen funciones derivadas de la evolución biológica de la especie, y correlativamente, la finalidad de las creencias y los contenidos proviene (...)
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  • Philosophy and default descriptivism: The functions debate.Björn Brunnander - 2011 - Metaphilosophy 42 (4):417-430.
    Abstract: By focusing on contributions to the literature on function ascription, this article seeks to illustrate two problems with philosophical accounts that are presented as having descriptive aims. There is a motivational problem in that there is frequently no good reason why descriptive aims should be important, and there is a methodological problem in that the methods employed frequently fail to match the task description. This suggests that the task description as such may be the result of “default descriptivism,” a (...)
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  • How ecosystem evolution strengthens the case for functional pluralism.Frédéric Bouchard - 2013 - In Philippe Huneman (ed.), Functions: selection and mechanisms. Springer. pp. 83--95.
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  • Externalist justification without reliability.Michael Bergmann - 2004 - Philosophical Issues 14 (1):35–60.
    Externalist analyses of justification typically include some sort of reliability requirement. But the fact that the beliefs of a demon victim can be justified despite their being formed in completely unreliable ways suggests that reliability isn’t required for justification. In this paper, I propose an analysis of justification in terms of proper function that enables us to hang on to the externalism without the reliability requirement. As an added bonus, the proposed analysis of justification yields an account of the elusive (...)
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  • The Evolution of Complexity.Mark Bedau - 2009 - In Barberousse Anouk, Morange M. & Pradeau T. (eds.), Mapping the Future of Biology. Boston Studies in the Philosophy of Science, vol 266. Springer.
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  • Evolution and Two Popular Proposals for the Definition of Function.Robert Arp - 2007 - Journal for General Philosophy of Science / Zeitschrift für Allgemeine Wissenschaftstheorie 38 (1):19-30.
    In the biological realm, a complete explanation of a trait seems to include an explanation in terms of function. It is natural to ask of some trait, "What is its function?" or "What purpose in the organism does the particular trait serve?" or "What is the goal of its activity?" There are several views concerning the appropriate definition of function for biological matters. Two popular views of function with respect to living things are Cummins' organizational account and the Griffiths/Godfrey-Smith modern (...)
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  • Archives or Palimpsests? Bacterial Genomes Unveil a Scenario for the Origin of Life.Antoine Danchin - 2007 - Biological Theory 2 (1):52-61.
    The three processes needed to create life, compartmentalization, metabolism, and information transfer (memory stored in nucleic acids and manipulation operated by proteins) are embedded in organized genome features. The core of life puts together growth and maintenance (which drives survival), while life in context explores and exploits specific niches. Analysis of gene persistence in a large number of genomes shows that the former constitutes the paleome, which recapitulates the three phases of the origin of life: metabolism of small molecules on (...)
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  • Evolutionary biology and the concept of disease.Anne Gammelgaard - 2000 - Medicine, Health Care and Philosophy 3 (2):109-116.
    In recent years, an increasing number of medical books and papers attempting to analyse the concepts of health and disease from the perspective of evolutionary biology have been published.This paper introduces the evolutionary approach to health and disease in an attempt to illuminate the premisses and the framework of Darwinian medicine. My primary aim is to analyse to what extent evolutionary theory provides for a biological definition of the concept of disease. This analysis reveals some important differences between functional explanations (...)
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  • 14. Real Traits, Real Functions?Colin Allen - 2002 - In André Ariew, Robert Cummins & Mark Perlman (eds.), Functions: New Essays in the Philosophy of Psychology and Biology. New York: Oxford University Press. pp. 373.
    Discussions of the functions of biological traits generally take the notion of a trait for granted. Defining this notion is a non-trivial problem. Different approaches to function place different constraints on adequate accounts of the notion of a trait. Accounts of function based on engineering-style analyses allow trait boundaries to be a matter of human interest. Accounts of function based on natural selection have typically been taken to require trait boundaries that are objectively real. After canvassing problems raised by each (...)
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  • The chronometrics of confirmation bias: Evidence for the inhibition of intuitive judgements.Edward Jn Stupple & Linden J. Ball - 2011 - Behavioral and Brain Sciences 34 (2):89-90.
    Mercier & Sperber (M&S) claim that the phenomenon of belief bias provides fundamental support for their argumentative theory and its basis in intuitive judgement. We propose that chronometric evidence necessitates a more nuanced account of belief bias that is not readily captured by argumentative theory.
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  • (1 other version)Design and its discontents.Bruce H. Weber - 2011 - Synthese 178 (2):271 - 289.
    The design argument was rebutted by David Hume. He argued that the world and its contents (such as organisms) were not analogous to human artifacts. Hume further suggested that there were equally plausible alternatives to design to explain the organized complexity of the cosmos, such as random processes in multiple universes, or that matter could have inherent properties to self-organize, absent any external crafting. William Paley, writing after Hume, argued that the functional complexity of living beings, however, defied naturalistic explanations. (...)
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  • The functions of fossils: Inference and explanation in functional morphology.Derek Turner - 2000 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 31 (1):193-212.
    This paper offers an account of the relationship between inference and explanation in functional morphology which combines Robert Brandon's theory of adaptation explanation with standard accounts of inference to the best explanation. Inferences of function from structure, it is argued, are inferences to the best adaptation explanation. There are, however, three different approaches to the problem of determining which adaptation explanation is the best. The theory of inference to the best adaptation explanation is then applied to a case study from (...)
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  • Manipulating emotion: The best evidence for non-cognitivism in the light of proper function.Charles Starkey - 2007 - Analysis 67 (3):230–237.
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