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The functional sense of mechanism

Philos Sci 80 (3):317-333 (2013)

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  1. Mechanism, autonomy and biological explanation.Leonardo Bich & William Bechtel - 2021 - Biology and Philosophy 36 (6):1-27.
    The new mechanists and the autonomy approach both aim to account for how biological phenomena are explained. One identifies appeals to how components of a mechanism are organized so that their activities produce a phenomenon. The other directs attention towards the whole organism and focuses on how it achieves self-maintenance. This paper discusses challenges each confronts and how each could benefit from collaboration with the other: the new mechanistic framework can gain by taking into account what happens outside individual mechanisms, (...)
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  • Explanatory hierarchy of causal structures in molecular biology.Zdenka Brzović, Vito Balorda & Predrag Šustar - 2021 - European Journal for Philosophy of Science 11 (2):1-21.
    In the debate on causal explanation in biology, in the past two decades largely influenced by the new mechanist approach, the concept of a pathway has recently reemerged as a promising research agenda, 551-572, 2018; The British Journal for the Philosophy of Science, 72, 131-158, 2021). Ross’ account of biological explanation differentiates several autonomous types of causal structures that play explanatory and other roles across the life sciences. NM, however, prioritizes mechanisms as vehicles of biological explanations. According to this program, (...)
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  • Etiological Explanations: Illness Causation Theory.Olaf Dammann - 2020 - Boca Raton, FL, USA: CRC Press.
    Theory of illness causation is an important issue in all biomedical sciences, and solid etiological explanations are needed in order to develop therapeutic approaches in medicine and preventive interventions in public health. Until now, the literature about the theoretical underpinnings of illness causation research has been scarce and fragmented, and lacking a convenient summary. This interdisciplinary book provides a convenient and accessible distillation of the current status of research into this developing field, and adds a personal flavor to the discussion (...)
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  • Putting History Back into Mechanisms.Justin Garson - 2023 - British Journal for the Philosophy of Science 74 (4):921-940.
    Mechanisms, in the prominent biological sense of the term, are historical entities. That is, whether or not something is a mechanism for something depends on its history. Put differently, while your spontaneously-generated molecule-for-molecule double has a heart, and its heart pumps blood around its body, its heart does not have a mechanism for pumping, since it does not have the right history. My argument for this claim is that mechanisms have proper functions; proper functions are historical entities; so, mechanisms are (...)
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  • The Mechanistic and Normative Structure of Agency.Jason Winning - 2019 - Dissertation, University of California San Diego
    I develop an interdisciplinary framework for understanding the nature of agents and agency that is compatible with recent developments in the metaphysics of science and that also does justice to the mechanistic and normative characteristics of agents and agency as they are understood in moral philosophy, social psychology, neuroscience, robotics, and economics. The framework I develop is internal perspectivalist. That is to say, it counts agents as real in a perspective-dependent way, but not in a way that depends on an (...)
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  • Internal Perspectivalism: The Solution to Generality Problems About Proper Function and Natural Norms.Jason Winning - 2020 - Biology and Philosophy 35 (33):1-22.
    In this paper, I argue that what counts as the proper function of a trait is a matter of the de facto perspective that the biological system, itself, possesses on what counts as proper functioning for that trait. Unlike non-perspectival accounts, internal perspectivalism does not succumb to generality problems. But unlike external perspectivalism, internal perspectivalism can provide a fully naturalistic, mind-independent grounding of proper function and natural norms. The attribution of perspectives to biological systems is intended to be neither metaphorical (...)
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  • Signals are minimal causes.Marc Artiga - 2021 - Synthese 198 (9):8581-8599.
    Although the definition of ‘signal’ has been controversial for some time within the life sciences, current approaches seem to be converging toward a common analysis. This powerful framework can satisfactorily accommodate many cases of signaling and captures some of its main features. This paper argues, however, that there is a central feature of signals that so far has been largely overlooked: its special causal role. More precisely, I argue that a distinctive feature of signals is that they are minimal causes. (...)
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  • Against Computational Perspectivalism.Dimitri Coelho Mollo - 2021 - British Journal for the Philosophy of Science 72 (4):1129-1153.
    Computational perspectivalism has been recently proposed as an alternative to mainstream accounts of physical computation, and especially to the teleologically-based mechanistic view. It takes physical computation to be partly dependent on explanatory perspectives and eschews appeal to teleology in helping individuate computational systems. I assess several varieties of computational perspectivalism, showing that they either collapse into existing non-perspectival views or end up with unsatisfactory or implausible accounts of physical computation. Computational perspectivalism fails, therefore, to be a compelling alternative to perspective-independent (...)
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  • (6 other versions)Quaderns de filosofia VI, 1.Quad Fia - 2019 - Quaderns de Filosofia 6 (1).
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  • Isolability as the unifying feature of modularity.Lucas J. Matthews - 2019 - Biology and Philosophy 34 (2):20.
    Although the concept of modularity is pervasive across fields and disciplines, philosophers and scientists use the term in a variety of different ways. This paper identifies two distinct ways of thinking about modularity, and considers what makes them similar and different. For philosophers of mind and cognitive science, cognitive modularity helps explain the capacities of brains to process sundry and distinct kinds of informational input. For philosophy of biology and evolutionary science, biological modularity helps explain the capacity of random evolutionary (...)
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  • From Wide Cognition to Mechanisms: A Silent Revolution.Marcin Miłkowski, Robert Clowes, Zuzanna Rucińska, Aleksandra Przegalińska, Tadeusz Zawidzki, Joel Krueger, Adam Gies, Marek McGann, Łukasz Afeltowicz, Witold Wachowski, Fredrik Stjernberg, Victor Loughlin & Mateusz Hohol - 2018 - Frontiers in Psychology 9.
    In this paper, we argue that several recent ‘wide’ perspectives on cognition (embodied, embedded, extended, enactive, and distributed) are only partially relevant to the study of cognition. While these wide accounts override traditional methodological individualism, the study of cognition has already progressed beyond these proposed perspectives towards building integrated explanations of the mechanisms involved, including not only internal submechanisms but also interactions with others, groups, cognitive artifacts, and their environment. The claim is substantiated with reference to recent developments in the (...)
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  • Representation and the active consumer.Patrick Butlin - 2020 - Synthese 197 (10):4533-4550.
    One of the central tasks for naturalistic theories of representation is to say what it takes for something to be a representation, and some leading theories have been criticised for being too liberal. Prominent discussions of this problem have proposed a producer-oriented solution; it is argued that representations must be produced by systems employing perceptual constancy mechanisms. However, representations may be produced by simple transducers if they are consumed in the right way. It is characteristic of representations to be consumed (...)
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  • Against Organizational Functions.Justin Garson - 2017 - Philosophy of Science 84 (5):1093-1103.
    Over the last 20 years, several philosophers have developed a new approach to biological functions, the organizational approach. This is not a single theory but a family of theories based on the idea that a trait token can acquire a function by virtue of the way it contributes to a complex, organized system and thereby to its own continued persistence as a token. I argue that the organizational approach faces a serious liberality objection. I examine three different ways organizational theorists (...)
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  • (1 other version)A weakened mechanism is still a mechanism: On the causal role of absences in mechanistic explanation.Alexander Mebius - 2013 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 45 (1):43-48.
    Much contemporary debate on the nature of mechanisms centers on the issue of modulating negative causes. One type of negative causability, which I refer to as “causation by absence,” appears difficult to incorporate into modern accounts of mechanistic explanation. This paper argues that a recent attempt to resolve this problem, proposed by Benjamin Barros, requires improvement as it overlooks the fact that not all absences qualify as sources of mechanism failure. I suggest that there are a number of additional types (...)
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  • On closing the gap between philosophical concepts and their usage in scientific practice: a lesson from the debate about natural selection as a mechanism.Lucas J. Matthews - 2016 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 55:21-28.
    In addition to theorizing about the role and value of mechanisms in scientific explanation or the causal structure of the world, there is a fundamental task of getting straight what a ‘mechanism’ is in the first place. Broadly, this paper is about the challenge of application: the challenge of aligning one's philosophical account of a scientific concept with the manner in which that concept is actually used in scientific practice. This paper considers a case study of the challenge of application (...)
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  • Natural Kinds, Psychiatric Classification and the History of the DSM.Jonathan Y. Tsou - 2016 - History of Psychiatry 27 (4):406-424.
    This paper addresses philosophical issues concerning whether mental disorders are natural kinds and how the DSM should classify mental disorders. I argue that some mental disorders (e.g., schizophrenia, depression) are natural kinds in the sense that they are natural classes constituted by a set of stable biological mechanisms. I subsequently argue that a theoretical and causal approach to classification would provide a superior method for classifying natural kinds than the purely descriptive approach adopted by the DSM since DSM-III. My argument (...)
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  • Making mechanism interesting.Alex Rosenberg - 2018 - Synthese 195 (1):11-33.
    I note the multitude of ways in which, beginning with the classic paper by Machamer et al., the mechanists have qualify their methodological dicta, and limit the vulnerability of their claims by strategic vagueness regarding their application. I go on to generalize a version of the mechanist requirement on explanations due to Craver and Kaplan :601–627, 2011) in cognitive and systems neuroscience so that it applies broadly across the life sciences in accordance with the view elaborated by Craver and Darden (...)
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  • Computation in physical systems.Gualtiero Piccinini - 2010 - Stanford Encyclopedia of Philosophy.
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  • Biological functions and dysfunctions: a selected dispositions approach.Fabian Hundertmark & Marlene van den Bos - 2024 - Biology and Philosophy 39 (2):1-20.
    Justin Garson has recently argued that proper functions are proximal activities of traits selected by phylogenetic or ontogenetic selection processes, and that traits are dysfunctional only if they cannot perform their proper functions for constitutional reasons. We partially agree with Garson, but reject the view that functions are proximal activities, as well as his account of dysfunctions. Instead, we propose our own theory that biological functions are selected dispositions and that a trait is dysfunctional in virtue of not having the (...)
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  • The Ups and Downs of Mechanism Realism: Functions, Levels, and Crosscutting Hierarchies.Joe Dewhurst & Alistair M. C. Isaac - 2021 - Erkenntnis 88 (3):1035-1057.
    Mechanism realists assert the existence of mechanisms as objective structures in the world, but their exact metaphysical commitments are unclear. We introduce Local Hierarchy Realism (LHR) as a substantive and plausible form of mechanism realism. The limits of LHR reveal a deep tension between two aspects of mechanists’ explanatory strategy. Functional decomposition identifies locally relevant entities and activities, while these same entities and activities are also embedded in a nested hierarchy of levels. In principle, a functional decomposition may identify entities (...)
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  • Standard Aberration: Cancer Biology and the Modeling Account of Normal Function.Seth Goldwasser - 2023 - Biology and Philosophy 38 (1):(4) 1-33.
    Cancer biology features the ascription of normal functions to parts of cancers. At least some ascriptions of function in cancer biology track local normality of parts within the global abnormality of the aberration to which those parts belong. That is, cancer biologists identify as functions activities that, in some sense, parts of cancers are supposed to perform, despite cancers themselves having no purpose. The present paper provides a theory to accommodate these normal function ascriptions—I call it the Modeling Account of (...)
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  • The Social Epistemology of Introspection.Elmar Unnsteinsson - 2022 - Mind and Language 38 (3):925-942.
    I argue that introspection recruits the same mental mechanism as that which is required for the production of ordinary speech acts. In introspection, in effect, we intentionally tell ourselves that we are in some mental state, aiming thereby to produce belief about that state in ourselves. On one popular view of speech acts, however, this is precisely what speakers do when speaking to others. On this basis, I argue that every bias discovered by social epistemology applies to introspection and other (...)
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  • Mechanistic trends in chemistry.Louis Caruana - 2018 - Substantia 2 (1):29-40.
    During the twentieth century, the mechanistic worldview came under attack mainly because of the rise of quantum mechanics but some of its basic characteristics survived and are still evident within current science in some form or other. Many scholars have produced interesting studies of such significant mechanistic trends within current physics and biology but very few have bothered to explore the effects of this worldview on current chemistry. This paper makes a contribution to fill this gap. It presents first a (...)
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  • Bacterial communication.Marc Artiga - 2021 - Biology and Philosophy 36 (4):1-19.
    Recent research on bacteria and other microorganisms has provided interesting insights into the nature of life, cooperation, evolution, individuality or species. In this paper, I focus on the capacity of bacteria to produce molecules that are usually classified as ’signals’ and I defend two claims. First, I argue that certain interactions between bacteria should actually qualify as genuine forms of communication. Second, I use this case study to revise our general theories of signaling. Among other things, I argue that a (...)
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  • The mechanistic stance.Jonny Lee & Joe Dewhurst - 2021 - European Journal for Philosophy of Science 11 (1):1-21.
    It is generally acknowledged by proponents of ‘new mechanism’ that mechanistic explanation involves adopting a perspective, but there is less agreement on how we should understand this perspective-taking or what its implications are for practising science. This paper examines the perspectival nature of mechanistic explanation through the lens of the ‘mechanistic stance’, which falls somewhere between Dennett’s more familiar physical and design stance. We argue this approach implies three distinct and significant ways in which mechanistic explanation can be interpreted as (...)
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  • Intervals of quasi-decompositionality and mechanistic explanations.Emilio Cáceres - 2019 - Quaderns de Filosofia 6 (1):15.
    It is commonly assumed that the concept of mechanism is a keytool for the scientific understanding of observable phenomena. However, there is no single definition of mechanism in the current philosophy of science. In fact, philosophers have developed several characterizations of what seemed to be a clear intuitive concept for scientists. In this paper, I will analyze these philosophical conceptions of mechanism, highlighting their problematic aspects and proposing a new mechanistic approach based on the idea that the pertinent levels of (...)
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  • Are There Teleological Functions to Compute?Dimitri Coelho Mollo - 2019 - Philosophy of Science 86 (3):431-452.
    I analyze a tension at the core of the mechanistic view of computation generated by its joint commitment to the medium independence of computational vehicles and to computational systems possessing teleological functions to compute. While computation is individuated in medium-independent terms, teleology is sensitive to the constitutive physical properties of vehicles. This tension spells trouble for the mechanistic view, suggesting that there can be no teleological functions to compute. I argue that, once considerations about the relevant function-bestowing factors for computational (...)
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  • The False Dichotomy between Causal Realization and Semantic Computation.Marcin Miłkowski - 2017 - Hybris. Internetowy Magazyn Filozoficzny 38:1-21.
    In this paper, I show how semantic factors constrain the understanding of the computational phenomena to be explained so that they help build better mechanistic models. In particular, understanding what cognitive systems may refer to is important in building better models of cognitive processes. For that purpose, a recent study of some phenomena in rats that are capable of ‘entertaining’ future paths (Pfeiffer and Foster 2013) is analyzed. The case shows that the mechanistic account of physical computation may be complemented (...)
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  • Mechanisms, counterfactuals and laws.Stavros Ioannidis & Stathis Psillos - 2017 - In Stuart Glennan & Phyllis McKay Illari (eds.), The Routledge Handbook of Mechanisms and Mechanical Philosophy. Routledge. pp. 144-156.
    In this chapter we examine the relation between mechanisms and laws/counterfactuals by revisiting the main notions of mechanism found in the literature. We distinguish between two different conceptions of ‘mechanism’: mechanisms-of underlie or constitute a causal process; mechanisms-for are complex systems that function so as to produce a certain behavior. According to some mechanists, a mechanism fulfills both of these roles simultaneously. The main argument of the chapter is that there is an asymmetrical dependence between both kinds of mechanisms and (...)
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  • Evolution, Dysfunction, and Disease: A Reappraisal.Paul E. Griffiths & John Matthewson - 2018 - British Journal for the Philosophy of Science 69 (2):301-327.
    Some ‘naturalist’ accounts of disease employ a biostatistical account of dysfunction, whilst others use a ‘selected effect’ account. Several recent authors have argued that the biostatistical account offers the best hope for a naturalist account of disease. We show that the selected effect account survives the criticisms levelled by these authors relatively unscathed, and has significant advantages over the BST. Moreover, unlike the BST, it has a strong theoretical rationale and can provide substantive reasons to decide difficult cases. This is (...)
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  • (1 other version)A weakened mechanism is still a mechanism: On the causal role of absences in mechanistic explanation.Alexander Mebius - 2014 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 45:43-48.
    Much contemporary debate on the nature of mechanisms centers on the issue of modulating negative causes. One type of negative causability, which I refer to as "causation by absence," appears difficult to incorporate into modern accounts of mechanistic explanation. This paper argues that a recent attempt to resolve this problem, proposed by Benjamin Barros, requires improvement as it overlooks the fact that not all absences qualify as sources of mechanism failure. I suggest that there are a number of additional types (...)
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  • Liberal Naturalism and Non-epistemic Values.Ricardo F. Crespo - 2019 - Foundations of Science 24 (2):247-273.
    The ‘value-free ideal’ has been called into question for several reasons. It does not include “epistemic values”—viewed as characteristic of ‘good science’—and rejects the so-called ‘contextual’, ‘non-cognitive’ or ‘non-epistemic’ values—all of them personal, moral, or political values. This paper analyzes a possible complementary argument about the dubitable validity of the value-free ideal, specifically focusing on social sciences, with a two-fold strategy. First, it will consider that values are natural facts in a broad or ‘liberal naturalist’ sense and, thus, a legitimate (...)
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  • Misconceptions, conceptual pluralism, and conceptual toolkits: bringing the philosophy of science to the teaching of evolution.Thomas A. C. Reydon - 2021 - European Journal for Philosophy of Science 11 (2):1-23.
    This paper explores how work in the philosophy of science can be used when teaching scientific content to science students and when training future science teachers. I examine the debate on the concept of fitness in biology and in the philosophy of biology to show how conceptual pluralism constitutes a problem for the conceptual change model, and how philosophical work on conceptual clarification can be used to address that problem. The case of fitness exemplifies how the philosophy of science offers (...)
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  • Functional analysis and the species design.Karen Neander - 2017 - Synthese 194 (4).
    This paper argues that a minimal notion of function and a notion of normal-proper function are used in explaining how bodies and brains operate. Neither is Cummins’ notion, as originally defined, and yet his is often taken to be the clearly relevant notion for such an explanatory context. This paper also explains how adverting to normal-proper functions, even if these are selected functions, can play a significant scientific role in the operational explanations of complex systems that physiologists and neurophysiologists provide, (...)
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  • Normativity of Predictions: A New Research Perspective.Michał Piekarski - 2019 - Frontiers in Psychology 10.
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  • Did the bacterium really kill the colonel? Systemic view, inter-level causation, and levels of quasi-decompositionality in mechanistic explanations.Emilio Cáceres Vázquez & Cristian Saborido - 2018 - Theoria : An International Journal for Theory, History and Fundations of Science 33 (1):129-148.
    In this paper, we critically analyze the mechanicist approach to scientific explanation and propose to complement this view with a conception of level as interval of quasi-decompositionality. This conception allows us to metaphysically base the mechanicist proposals on characteristic systemic features. By means of concrete examples, we claim that this proposal is able to overcome some of the alleged limitations of predominant models of mechanistic explanation.
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  • The Four Analytic Levels of Social Sciences.Ricardo Crespo - 2023 - Revue de Philosophie Économique 24 (2):93-127.
    Cet article défend l’idée que l’on peut distinguer quatre niveaux d’analyse au sein des sciences sociales (y compris l’économie) – à savoir, a) un niveau descriptif statistique, b) un niveau explicatif causal, c) un niveau explicatif téléologique, et d) un niveau téléologique prescriptif. Généralement, les sciences sociales ne considèrent que les niveaux a) et b). L’exclusion du niveau c) peut conduire à considérer comme des « anomalies » certains comportements qui ne sont pas compatibles avec des théories comme celle du (...)
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  • (1 other version)Research problems and methods in the philosophy of medicine.Michael Loughlin, Robyn Bluhm & Mona Gupta - 2017 - In .
    Philosophy of medicine encompasses a broad range of methodological approaches and theoretical perspectives—from the uses of statistical reasoning and probability theory in epidemiology and evidence-based medicine to questions about how to recognize the uniqueness of individual patients in medical humanities, person-centered care, and values-based practice; and from debates about causal ontology to questions of how to cultivate epistemic and moral virtue in practice. Apart from being different ways of thinking about medical practices, do (and should) these different philosophical approaches have (...)
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  • Evolutionary causes as mechanisms: a critical analysis.Saúl Pérez-González & Victor J. Luque - 2019 - History and Philosophy of the Life Sciences 41 (2):13.
    In this paper, we address the question whether a mechanistic approach can account for evolutionary causes. The last decade has seen a major attempt to account for natural selection as a mechanism. Nevertheless, we stress the relevance of broadening the debate by including the other evolutionary causes inside the mechanistic approach, in order to be a legitimate conceptual framework on the same footing as other approaches to evolutionary theory. We analyse the current debate on natural selection as a mechanism, and (...)
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  • Transitive and Intransitive Selection Processes and Their Effects.Addy D. Donason - 2023 - Studies in Logic, Grammar and Rhetoric 68 (1):9-34.
    Karen Neander’s (1991a, b) Selected Effects (SE) theory of biological proper functions argues that the function of a trait is the action for which it was “caused” to be selected by natural selection. Her life’s work has already left a lasting impact, however SE theory has yet to be more properly formalized as a conceptual analysis of biological functions. Although other SE theories have sought to build upon Neander’s work (e.g., Garson, 2017), there remains an ambiguity in the theory’s use (...)
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  • Social Mechanisms and Social Causation.Friedel Weinert - unknown
    The aim of this paper is to examine the notion of social mechanisms by comparison with the notions of evolutionary and physical mechanisms. It is argued that social mechanisms are based on trends, and not lawlike regularities, so that social mechanisms are different from mechanisms in the natural sciences. Taking as an example of social causation the abolition of the slave trade, the paper argues that social mechanisms should be incorporated in Weber’s wider notion of adequate causation in order to (...)
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  • Motivation, counterfactual predictions and constraints: normativity of predictive mechanisms.Michał Piekarski - 2022 - Synthese 200 (5):1-31.
    The aim of this paper is to present the ontic approach to the normativity of cognitive functions and mechanisms, which is directly related to the understanding of biological normativity in terms of normative mechanisms. This approach assumes the hypothesis that cognitive processes contain a certain normative component independent of external attributions and researchers’ beliefs. This component consists of specific cognitive mechanisms, which I call normative. I argue that a mechanism is normative when it constitutes given actions or behaviors of a (...)
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  • Evidence, illness, and causation: An epidemiological perspective on the Russo–Williamson Thesis.Alexander R. Fiorentino & Olaf Dammann - 2015 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 54:1-9.
    According to the Russo-Williamson Thesis, causal claims in the health sciences need to be supported by both difference-making and mechanistic evidence. In this article, we attempt to determine whether Evidence-based Medicine can be improved through the consideration of mechanistic evidence. We discuss the practical composition and function of each RWT evidence type and propose that exposure-outcome evidence provides associations that can be explained through a hypothesis of causation, while mechanistic evidence provides finer-grained associations and knowledge of entities that ultimately explains (...)
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  • When is it Mental?Stuart Glennan - 2015 - Humana Mente 8 (29).
    Most philosophical debate over mental causation has been concerned with reconciling commonsense intuitions that there are causal interactions between the mental and the physical with philosophical theories of the nature of the mental that seem to suggest otherwise. My concern is with a different and more practical problem. We often confront some cognitive, affective, or bodily phenomenon, and wonder about its source – its etiology or its underlying causal basis. For instance, you might wonder whether your queasiness due to something (...)
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  • Biological pathology from an organizational perspective.Cristian Saborido & Alvaro Moreno - 2015 - Theoretical Medicine and Bioethics 36 (1):83-95.
    In contrast to the “normativist” view, “naturalist” theorists claim that the concept of health refers to natural or normal states and propose different characterizations of healthy and diseased conditions that are meant to be objectivist and biologically grounded. In this article, we examine the core concept of these naturalist accounts of disease, i.e., the concept of biological malfunction, and develop a new formulation of the notion of malfunction following the recent organizational approach to functions in the philosophy of biology. We (...)
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