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  1. A conceptual taxonomy of adaptation in evolutionary biology.Emanuele Serrelli & Francesca Micol Rossi - manuscript
    The concept of adaptation is employed in many fields such as biology, psychology, cognitive sciences, robotics, social sciences, even literacy and art,1 and its meaning varies quite evidently according to the particular research context in which it is applied. We expect to find a particularly rich catalogue of meanings within evolutionary biology, where adaptation has held a particularly central role since Darwin’s The Origin of Species (1859) throughout important epistemological shifts and scientific findings that enriched and diversified the concept. Accordingly, (...)
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  • Biology's last paradigm shift. The transition from natural theology to Darwinism.Massimo Pigliucci - 2012 - Paradigmi 2012 (3):45-58.
    The theory of evolution, which provides the conceptual framework for all modern research in organismal biology and informs research in molecular bi- ology, has gone through several stages of expansion and refinement. Darwin and Wallace (1858) of course proposed the original idea, centering on the twin concepts of natural selection and common descent. Shortly thereafter, Wallace and August Weismann worked toward the complete elimination of any Lamarckian vestiges from the theory, leaning in particular on Weismann’s (1893) concept of the separation (...)
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  • Reciprocal causation and the proximate–ultimate distinction.T. E. Dickins & R. A. Barton - 2013 - Biology and Philosophy 28 (5):747-756.
    Laland and colleagues have sought to challenge the proximate–ultimate distinction claiming that it imposes a unidirectional model of causation, is limited in its capacity to account for complex biological phenomena, and hinders progress in biology. In this article the core of their argument is critically analyzed. It is claimed that contrary to their claims Laland et al. rely upon the proximate–ultimate distinction to make their points and that their alternative conception of reciprocal causation refers to phenomena that were already accounted (...)
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  • Genetic assimilation and a possible evolutionary paradox: can macroevolution sometimes be so fast to pass us by?Massimo Pigliucci - 2003 - Evolution 57 (7):1455-1464.
    The idea of genetic assimilation, that environmentally induced phenotypes may become genetically fixed and no longer require the original environmental stimulus, has had varied success through time in evolutionary biology research. Proposed by Waddington in the 1940s, it became an area of active empirical research mostly thanks to the efforts of its inventor and his collaborators. It was then attacked as of minor importance during the ‘‘hardening’’ of the neo-Darwinian synthesis and was relegated to a secondary role for decades. Recently, (...)
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  • ‘‘Describing our whole experience’’: The statistical philosophies of W. F. R. Weldon and Karl Pearson.Charles H. Pence - 2011 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 42 (4):475-485.
    There are two motivations commonly ascribed to historical actors for taking up statistics: to reduce complicated data to a mean value (e.g., Quetelet), and to take account of diversity (e.g., Galton). Different motivations will, it is assumed, lead to different methodological decisions in the practice of the statistical sciences. Karl Pearson and W. F. R. Weldon are generally seen as following directly in Galton’s footsteps. I argue for two related theses in light of this standard interpretation, based on a reading (...)
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  • Evo-Devo as a Trading Zone.Rasmus Grønfeldt Winther - 2014 - In Alan C. Love (ed.), Conceptual Change in Biology: Scientific and Philosophical Perspectives on Evolution and Development. Berlin: Springer Verlag, Boston Studies in the Philosophy of Science.
    Evo-Devo exhibits a plurality of scientific “cultures” of practice and theory. When are the cultures acting—individually or collectively—in ways that actually move research forward, empirically, theoretically, and ethically? When do they become imperialistic, in the sense of excluding and subordinating other cultures? This chapter identifies six cultures – three /styles/ (mathematical modeling, mechanism, and history) and three /paradigms/ (adaptationism, structuralism, and cladism). The key assumptions standing behind, under, or within each of these cultures are explored. Characterizing the internal structure of (...)
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  • When Science Studies Religion: Six Philosophy Lessons for Science Classes.Massimo Pigliucci - 2013 - Science & Education 22 (1):49-67.
    It is an unfortunate fact of academic life that there is a sharp divide between science and philosophy, with scientists often being openly dismissive of philosophy, and philosophers being equally contemptuous of the naivete ́ of scientists when it comes to the philosophical underpinnings of their own discipline. In this paper I explore the possibility of reducing the distance between the two sides by introducing science students to some interesting philosophical aspects of research in evolutionary biology, using biological theories of (...)
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  • How Successful is Naturalism?Georg Gasser (ed.) - 2007 - Frankfurt: Ontos Verlag.
    The aim of the present volume is to draw the balance of naturalism's success so far.
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  • Drift: A historical and conceptual overview.Anya Plutynski - 2007 - Biological Theory 2 (2):156-167.
    There are several different ways in which chance affects evolutionary change. That all of these processes are called “random genetic drift” is in part a due to common elements across these different processes, but is also a product of historical borrowing of models and language across different levels of organization in the biological hierarchy. A history of the concept of drift will reveal the variety of contexts in which drift has played an explanatory role in biology, and will shed light (...)
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  • Towards a unified science of cultural evolution.Alex Mesoudi, Andrew Whiten & Kevin N. Laland - 2006 - Behavioral and Brain Sciences 29 (4):329-347.
    We suggest that human culture exhibits key Darwinian evolutionary properties, and argue that the structure of a science of cultural evolution should share fundamental features with the structure of the science of biological evolution. This latter claim is tested by outlining the methods and approaches employed by the principal subdisciplines of evolutionary biology and assessing whether there is an existing or potential corresponding approach to the study of cultural evolution. Existing approaches within anthropology and archaeology demonstrate a good match with (...)
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  • From the reaktionsNorm to the adaptive Norm: The Norm of reaction, 1909–1960. [REVIEW]Sahotra Sarkar - 1999 - Biology and Philosophy 14 (2):235-252.
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  • Evolution in Space and Time: The Second Synthesis of Ecology, Evolutionary Biology, and the Philosophy of Biology.Mitchell Ryan Distin - 2023 - Self-published because fuck the leeches of Big Publishing.
    Change is the fundamental idea of evolution. Explaining the extraordinary biological change we see written in the history of genomes and fossil beds is the primary occupation of the evolutionary biologist. Yet it is a surprising fact that for the majority of evolutionary research, we have rarely studied how evolution typically unfolds in nature, in changing ecological environments, over space and time. While ecology played a major role in the eventual acceptance of the population genetic viewpoint of evolution in the (...)
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  • Situating physiology within evolutionary theory.Nathalie Gontier - forthcoming - Journal of Physiology.
    Traditionally defined as the science of the living, or as the field that beyond anatomical structure and bodily form studies functional organization and behaviour, physiology has long been excluded from evolutionary research. The main reason for this exclusion is that physiology has a presential and futuristic outlook on life, while evolutionary theory is traditionally defined as the study of natural history. In this paper, I re-evaluate these classic science divisions and situate physiology within the history of the evolutionary sciences, as (...)
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  • Darwinism and Neo‐Darwinism.James G. Lennox - 2008 - In Sahorta Sarkar & Anya Plutynski (eds.), Companion to the Philosophy of Biology. Blackwell. pp. 77–98.
    This chapter contains section titled: Introduction Darwin's Life Darwin's Darwinism Philosophical Problems with Darwin's Darwinism The Core Problems and Darwinism Conclusion References Further Reading.
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  • Agential Teleosemantics.Tiago Rama - 2022 - Dissertation, Autonomous University of Barcelona
    The field of the philosophy of biology is flourishing in its aim to evaluate and rethink the view inherited from the previous century ---the Modern Synthesis. Different research areas and theories have come to the fore in the last decades in order to account for different biological phenomena that, in the first instance, fall beyond the explanatory scope of the Modern Synthesis. This thesis is anchored and motivated by this revolt in the philosophy of biology. -/- The central target in (...)
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  • “ « And the rod starts to swing ». Morphogènes, instabilités et organismes imaginaires dans l’approche de Turing à la biologie » ”.Sara Franceschelli - 2020 - Intellectica 72:191-214.
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  • Historical and epistemological perspectives on what Lateral Gene Transfer mechanisms contribute to our understanding of evolution.Nathalie Gontier - 2015 - In Reticulate Evolution: Symbiogenesis, Lateral Gene Transfer, Hybridization and Infectious heredity. Springer. pp. 121-178.
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  • Uniting micro- with macroevolution into an Extended Synthesis: Reintegrating life’s natural history into evolution studies.Nathalie Gontier - 2015 - In Emanuele Serrelli & Nathalie Gontier (eds.), Macroevolution: Explanation, Interpretation and Evidence. Springer. pp. 227-278.
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  • Guest-Editorial Introduction: Converging Evolutionary Patterns in Life and Culture.Nathalie Gontier - 2016 - Evolutionary Biology 4 (43):427-445.
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  • Book Review: Unifying Biology: The Evolutionary Synthesis and Evolutionary Biology. [REVIEW]Christopher Cosans - 1999 - Science, Technology, and Human Values 24 (4):505-508.
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  • The Ontology of Organismic Agency: A Kantian Approach.Hugh Desmond & Philippe Huneman - 2020 - In Andrea Altobrando & Pierfrancesco Biasetti (eds.), Natural Born Monads: On the Metaphysics of Organisms and Human Individuals. De Gruyter. pp. 33-64.
    Biologists explain organisms’ behavior not only as having been programmed by genes and shaped by natural selection, but also as the result of an organism’s agency: the capacity to react to environmental changes in goal-driven ways. The use of such ‘agential explanations’ reopens old questions about how justified it is to ascribe agency to entities like bacteria or plants that obviously lack rationality and even a nervous system. Is organismic agency genuinely ‘real’ or is it just a useful fiction? In (...)
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  • Functionalism without Selectionism: Charles Elton's "Functional" Niche and the Concept of Ecological Function.Antoine C. Dussault - 2022 - Biological Theory 17 (1):52-67.
    This article offers an analysis of ecologist Charles Elton’s “functional” concept of the niche and of the notion of function implicitly associated with it. It does so in part by situating Elton’s niche concept within the broader context of the “functionalist-interactionist” approach to ecology he introduced, and in relation to his views on the relationship between ecology and evolution. This involves criticizing the common claim that Elton’s idea of species as fulfilling functional roles within ecological communities committed him to an (...)
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  • The evolutionary role of affordances: ecological psychology, niche construction, and natural selection.Manuel Heras-Escribano - 2020 - Biology and Philosophy 35 (2):1-27.
    This paper aims to examine the evolutionary role of affordances, that is, the possibilities for action available in our environments. There are two allegedly competing views for explaining the evolutionary role of affordances: the first is based on natural selection; the second is based on niche construction. According to the first, affordances are resources that exert selection pressure. The second view claims that affordances are ecological inheritances in the organism’s niche that are the product of a previous alteration of the (...)
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  • Extended Evolutionary Synthesis: Neither Synthesis Nor Extension.Claudio Ricardo Martins dos Reis & Leonardo Augusto Luvison Araújo - 2020 - Biological Theory 15 (2):57-60.
    The extended evolutionary synthesis intends to offer a new framework for understanding evolution based mainly on empirical and theoretical findings of current studies, including heredity and evolutionary developmental biology. In this essay, we present and develop the following objections about the terminology associated with the EES literature: despite using the term "extension," EES protagonists claim new evolutionary processes, reformulate conceptual networks, and modify central assumptions of the evolutionary synthesis. Therefore, the difference between ES and EES should not be described in (...)
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  • Macroevolution: Explanation, Interpretation and Evidence.Emanuele Serrelli & Nathalie Gontier (eds.) - 2015 - Springer.
    This book is divided in two parts, the first of which shows how, beyond paleontology and systematics, macroevolutionary theories apply key insights from ecology and biogeography, developmental biology, biophysics, molecular phylogenetics, and even the sociocultural sciences to explain evolution in deep time. In the second part, the phenomenon of macroevolution is examined with the help of real life-history case studies on the evolution of eukaryotic sex, the formation of anatomical form and body-plans, extinction and speciation events of marine invertebrates, hominin (...)
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  • Evolutionary Progress: Stephen Jay Gould’s Rejection and Its Critique.Jianhui Li - 2019 - Philosophy Study 9 (6).
    In evolutionary theory, we generally believe that the evolution of life is from simple to complex, from single to diverse, and from lower to higher. Thus, the idea of evolutionary progress appears obvious. However, in contemporary academic circles, some biologists and philosophers challenge this idea. Among them, Gould is the most influential. This paper first describes Gould’s seven arguments against evolutionary progress, i.e., the human arrogance argument, anthropocentric argument, no inner thrust argument, no biological base argument, extreme contingency argument, statistical (...)
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  • The Modern Synthesis: Theoretical or Institutional Event?Jean Gayon & Philippe Huneman - 2019 - Journal of the History of Biology 52 (4):519-535.
    This paper surveys questions about the nature of the Modern Synthesis as a historical event : was it rather theoretical than institutional? When and where did it actually happen? Who was involved? It argues that all answers to these questions are interrelated, and that systematic sets of answers define specific perspectives on the Modern Synthesis that are all complementary.
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  • Organic Selection and Social Heredity: The Original Baldwin Effect Revisited.Nam Le - 2019 - Artificial Life Conference Proceedings 2019 (31):515-522.
    The so-called “Baldwin Effect” has been studied for years in the fields of Artificial Life, Cognitive Science, and Evolutionary Theory across disciplines. This idea is often conflated with genetic assimilation, and has raised controversy in trans-disciplinary scientific discourse due to the many interpretations it has. This paper revisits the “Baldwin Effect” in Baldwin’s original spirit from a joint historical, theoretical and experimental approach. Social Heredity – the inheritance of cultural knowledge via non-genetic means in Baldwin’s term – is also taken (...)
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  • Georges Canguilhem et la question de la « subjectivité » vitale.Ciprian Jeler - 2014 - Meta: Research in Hermeneutics, Phenomenology, and Practical Philosophy 6 (2):506-525.
    This paper outlines a hypothesis regarding the close connection between two problems in Georges Canguilhem’s work. The first problem is that of Canguilhem’s insistence to include considerations about natural selection in his work and of the role that this notion could play therein. The second problem consists in Canguilhem’s tendency to often use the term “life” as the subject of his sentences, even though this tendency may seem to at least partially contradict some of the central theses advanced in his (...)
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  • The Modern Synthesis.Anya Plutynski - 2006 - In Sahotra Sarkar & Jessica Pfeiffer (eds.), Routledge Encyclopedia of Philosophy of Science.
    Huxley coined the phrase, the “evolutionary synthesis” to refer to the acceptance by a vast majority of biologists in the mid-20th Century of a “synthetic” view of evolution. According to this view, natural selection acting on minor hereditary variation was the primary cause of both adaptive change within populations and major changes, such as speciation and the evolution of higher taxa, such as families and genera. This was, roughly, a synthesis of Mendelian genetics and Darwinian evolutionary theory; it was a (...)
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  • Why did life emerge?Arto Annila & Annila E. Annila A. - 2008 - International Journal of Astrobiology 7 (3-4):293–300.
    Many mechanisms, functions and structures of life have been unraveled. However, the fundamental driving force that propelled chemical evolution and led to life has remained obscure. The second law of thermodynamics, written as an equation of motion, reveals that elemental abiotic matter evolves from the equilibrium via chemical reactions that couple to external energy towards complex biotic non-equilibrium systems. Each time a new mechanism of energy transduction emerges, e.g., by random variation in syntheses, evolution prompts by punctuation and settles to (...)
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  • Teleology and theology. On the specificity of teleological explanations.Gabriele De Anna - 2018 - European Journal for Philosophy of Religion 10 (3):27-50.
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  • The Extended (Evolutionary) Synthesis Debate: Where Science Meets Philosophy.Massimo Pigliucci & Leonard Finkelman - 2015 - BioScience 64 (6):511-516.
    Recent debates between proponents of the modern evolutionary synthesis (the standard model in evolutionary biology) and those of a possible extended synthesis are a good example of the fascinating tangle among empirical, theoretical, and conceptual or philosophical matters that is the practice of evolutionary biology. In this essay, we briefly discuss two case studies from this debate, highlighting the relevance of philosophical thinking to evolutionary biologists in the hope of spurring further constructive cross-pollination between the two fields.
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  • Où vont le darwinisme et la théorie synthétique de l’évolution?Charles Devillers - 1986 - Revue de Synthèse 107 (3):243-253.
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  • ‘The Action of the Brain’. Machine Models and Adaptive Functions in Turing and Ashby.Hajo Greif - 2017 - In Vincent C. Müller (ed.), Philosophy and theory of artificial intelligence 2017. Berlin: Springer. pp. 24-35.
    Given the personal acquaintance between Alan M. Turing and W. Ross Ashby and the partial proximity of their research fields, a comparative view of Turing’s and Ashby’s work on modelling “the action of the brain” (letter from Turing to Ashby, 1946) will help to shed light on the seemingly strict symbolic/embodied dichotomy: While it is clear that Turing was committed to formal, computational and Ashby to material, analogue methods of modelling, there is no straightforward mapping of these approaches onto symbol-based (...)
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  • The only wrong cell is the dead one: On the enactive approach to normativity.Manuel Heras-Escribano, Jason Noble & Manuel De Pinedo García - 2013 - In Heras-Escribano Manuel, Noble Jason & Pinedo García Manuel De (eds.), Pietro Liò et al. (eds.) Advances in Artificial Life (ECAL 2013). pp. 665-670.
    In this paper we challenge the notion of ‘normativity’ used by some enactive approaches to cognition. We define some varieties of enactivism and their assumptions and make explicit the reasoning behind the co-emergence of individuality and normativity. Then we argue that appealing to dispositions for explaining some living processes can be more illuminating than claiming that all such processes are normative. For this purpose, we will present some considerations, inspired by Wittgenstein, regarding norm-establishing and norm-following and show that attributions of (...)
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  • Modern Synthesis is the Light of Microbial Genomics.Austin Booth, Carlos Mariscal & W. Ford Doolittle - 2016 - Annual Reviews of Microbiology 70 (1):279-297.
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  • The Semiosis of “Side Effects” in Genetic Interventions.Ramsey Affifi - 2016 - Biosemiotics 9 (3):345-364.
    Genetic interventions, which include transgenic engineering, gene editing, and other forms of genome modification aimed at altering the information “in” the genetic code, are rapidly increasing in power and scale. Biosemiotics offers unique tools for understanding the nature, risks, scope, and prospects of such technologies, though few in the community have turned their attention specifically in this direction. Bruni is an important exception. In this paper, I examine how we frame the concept of “side effects” that result from genetic interventions (...)
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  • La omnipresente selección natural.Andrés Galera - 2010 - Endoxa 24:47.
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  • Unifying biology: The evolutionary synthesis and evolutionary biology.V. B. Smocovitis - 1992 - Journal of the History of Biology 25 (1):1-65.
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  • Metaphors as surrogate variables. The case of adaptive radiation.Alfonso Arroyo-Santos & Mark E. Olson - manuscript
    We develop a new metaphor account where metaphors become surrogate variables for different but related phenomena. As we will argue, subrogation is the result of the interplay between the things inspired by the metaphor and the empirical dynamics that result from such inspiration. In particular, we focus on adaptive radiation, a major concept of evolutionary biology. Our study suggests that there is no distinct phenomenon, process, or pattern in nature than can be identified as adaptive radiation. What we have instead (...)
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  • Evolutionary biology: a basic science for medicine in the 21st century.Robert L. Perlman - 2011 - Perspectives in Biology and Medicine 54 (1):75-88.
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  • From Cells to Structures to Evolutionary Novelties: Creating a Continuum.Catherine Anne Boisvert - 2013 - Biological Theory 8 (3):211-220.
    This thematic issue addresses questions of constraints on the evolution of form—physical, biological, and technical. Here, form is defined as an embodiment of a specific structure, which can be hierarchically different yet emerge from the same processes. The focus of this contribution is about how developmental biology and paleontology can be better integrated and compared in order to produce hypotheses about the evolution of form. The constraints on current EvoDevo research stem from the disconnect in the focus of study for (...)
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  • The architects of the evolutionary synthesis in national socialist germany: Science and politics. [REVIEW]Thomas Junker & Uwe Hoßfeld - 2002 - Biology and Philosophy 17 (2):223-249.
    The Synthetic Theory of Evolution (SyntheticDarwinism) was forged between 1925 and 1950.Several historians of science have pointed outthat this synthesis was a joint venture ofSoviet, German, American and Britishbiologists: A fascinating example of scientificcooperation, considering the fact that theevolutionary synthesis emerged during thedecades in which these countries were engagedin fierce political, military and ideologicalconflicts. The ideological background of itsAnglo-American representatives has beenanalyzed in the literature. We have examinedthe scientific work and ideological commitmentsof the German Darwinians during the ThirdReich. We based (...)
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  • Organic selection: Proximate environmental effects on the evolution of morphology and behaviour. [REVIEW]Brian K. Hall - 2001 - Biology and Philosophy 16 (2):215-237.
    Organic selection (the Baldwin Effect) by which an environmentally elicitedphenotypic adaptation comes under genotypic control following selectionwas proposed independently in 1896 by the psychologists James Baldwinand Conwy Lloyd Morgan and by the paleontologist Henry Fairfield Osborn.Modified forms of organic selection were proposed as autonomization bySchmalhausen in 1938, as genetic assimilation by Waddington in 1942, andas an explanation for evolution in changing environments or for speciationby Matsuda and West-Eberhard in the 1980s. Organic selection as amechanism mediating proximate environmental effects on the (...)
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  • Evolutionary theory in the 1920s: The nature of the “synthesis”.Sahotra Sarkar - 2004 - Philosophy of Science 71 (5):1215-1226.
    This paper analyzes the development of evolutionary theory in the period from 1918 to 1932. It argues that: (i) Fisher's work in 1918 constituted a not fully satisfactory reduction of biometry to Mendelism; (ii) there was a synthesis in the 1920s but that this synthesis was mainly one of classical genetics with population genetics, with Haldane's The Causes of Evolution being its founding document; (iii) the most important achievement of the models of theoretical population genetics was to show that natural (...)
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  • Who was J. B. S. Haldane?: Samanth Subramanian: A Dominant Character: The Radical Science and Restless Politics of J. B. S. Haldane; W. W. Norton, New York, 2020, 400 pp, $40 hbk, ISBN 978-0-393-63424-2.Sahotra Sarkar - 2021 - Biological Theory 16 (4):268-275.
    Subramanian has produced a new biography of Haldane taking into account archival material that has only become public during the last decade. He has been able to provide a more complete picture of Haldane’s personal life than earlier biographers, such as his difficult schooldays at Eton and the deterioration of his first marriage. He has also highlighted the extent to which Haldane was kept under constant secret surveillance by British intelligence services because of his politics. However, the book is less (...)
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  • Eclipsing the Eclipse?: A Neo-Darwinian Historiography Revisited.Max Meulendijks - 2021 - Journal of the History of Biology 54 (3):403-443.
    Julian Huxley’s eclipse of Darwinism narrative has cast a long shadow over the historiography of evolutionary theory around the turn of the nineteenth century. It has done so by limiting who could be thought of as Darwinian. Peter Bowler used the eclipse to draw attention to previously understudied alternatives to Darwinism, but maintained the same flaw. In his research on the Non-Darwinian Revolution, he extended this problematic element even further back in time. This paper explores how late nineteenth-century neo-Darwinian conceptualizations (...)
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  • Pluralizing Darwin: Making Counter-Factual History of Science Significant.Thierry Hoquet - 2021 - Journal for General Philosophy of Science / Zeitschrift für Allgemeine Wissenschaftstheorie 52 (1):115-134.
    In the wake of recent attempts at alternate history (Bowler 2013), this paper suggests several avenues for a pluralistic approach to Charles Darwin and his role in the history of evolutionary theory. We examine in what sense Darwin could be described as a major driver of theoretical change in the history of biology. First, this paper examines how Darwin influenced the future of biological science: not merely by stating the fact of evolution or by bringing evidence for it; but by (...)
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  • The Fate of William Whewell’s Four Palætiological Domains: A Comparative Study.Koen B. Tanghe - 2019 - Perspectives on Science 27 (6):810-838.
    In 1847, the British polymath William Whewell pointed out that the sciences for which he, in 1837, had coined the term “palætiological” have much in common and that they may reflect light upon each other by being treated together. This recommendation is here put into practice in a specific way, to wit, not by comparing the palaetiological sciences that Whewell distinguished himself but by comparing the general historical development of the scientific study of the four broad palætiological domains that he (...)
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