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  1. Emergence: A Philosophical Account.Paul Humphreys - 2016 - New York, NY, United States of America: Oup Usa.
    Emergence develops a novel account of diachronic ontological emergence called transformational emergence and locates it in an established historical framework. The author shows how many problems affecting ontological emergence result from a dominant but inappropriate metaphysical tradition and provides a comprehensive assessment of current theories of emergence.
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  • Biological Individuals.Robert A. Wilson & Matthew J. Barker - 2024 - Stanford Encyclopedia of Philosophy.
    The impressive variation amongst biological individuals generates many complexities in addressing the simple-sounding question what is a biological individual? A distinction between evolutionary and physiological individuals is useful in thinking about biological individuals, as is attention to the kinds of groups, such as superorganisms and species, that have sometimes been thought of as biological individuals. More fully understanding the conceptual space that biological individuals occupy also involves considering a range of other concepts, such as life, reproduction, and agency. There has (...)
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  • The strategy of endogenization in evolutionary biology.Samir Okasha - 2018 - Synthese 198 (Suppl 14):3413-3435.
    Evolutionary biology is striking for its ability to explain a large and diverse range of empirical phenomena on the basis of a few general theoretical principles. This article offers a philosophical perspective on the way that evolutionary biology has come to achieve such impressive generality, by focusing on “the strategy of endogenization”. This strategy involves devising evolutionary explanations for biological features that were originally part of the background conditions, or scaffolding, against which such explanations take place. Where successful, the strategy (...)
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  • The Philosophy of Social Evolution.Jonathan Birch - 2017 - Oxford: Oxford University Press.
    From mitochondria to meerkats, the natural world is full of spectacular examples of social behaviour. In the early 1960s W. D. Hamilton changed the way we think about how such behaviour evolves. He introduced three key innovations - now known as Hamilton's rule, kin selection, and inclusive fitness - and his pioneering work kick-started a research program now known as social evolution theory. This is a book about the philosophical foundations and future prospects of that program. [Note: only the Introduction (...)
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  • Causality: Models, Reasoning and Inference.Judea Pearl - 2000 - Tijdschrift Voor Filosofie 64 (1):201-202.
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  • The Relation between Kin and Multilevel Selection: An Approach Using Causal Graphs.Samir Okasha - 2016 - British Journal for the Philosophy of Science 67 (2):435-470.
    Kin selection and multilevel selection are alternative approaches for studying the evolution of social behaviour, the relation between which has long been a source of controversy. Many recent theorists regard the two approaches as ultimately equivalent, on the grounds that gene frequency change can be correctly expressed using either. However, this shows only that the two are formally equivalent, not that they offer equally good causal representations of the evolutionary process. This article articulates the notion of an ‘adequate causal representation’ (...)
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  • Is there such a thing as “group selection” in the contextual analysis framework?Ciprian Jeler - 2015 - History and Philosophy of the Life Sciences 36 (4):484-502.
    This paper argues that the contextual approach to natural selection does not offer an estimation of the contributions of individual and group selection to evolutionary change in multi-level selection scenarios, and that this is so because the term “group selection”, as defined by the contextual approach, does not refer to a process taking place at the group level. In the contextual analysis framework, this term simply denotes an evolutionary change that takes place due to the fact that, overall, individual types (...)
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  • (1 other version)Levels, Time and Fitness in Evolutionary Transitions in Individuality.Pierrick Bourrat - 2015 - Philosophy, Theory, and Practice in Biology 7 (20150505).
    Yes, fitness is the central concept of evolutionary biology, but it is an elusive concept. Almost everyone who looks at it seriously comes out in a different place.
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  • The Major Transitions in Evolution.John Maynard Smith & Eörs Szathmáry - 1996 - Journal of the History of Biology 29 (1):151-152.
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  • Group selection and contextual analysis.Eugene Earnshaw - 2015 - Synthese 192 (1):305-316.
    Multi-level selection can be understood via the Price equation or contextual analysis, which offer incompatible statistical decompositions of evolutionary change into components of group and individual selection. Okasha argued that each approach suffers from problem cases. I introduce further problem cases for the Price approach, arguing that it is appropriate for MLS 2 group selection but not MLS 1. I also show that the problem cases Okasha raises for contextual analysis can be resolved. For some such cases, however, it emerges (...)
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  • Origins of Evolutionary Transitions.Ellen Clarke - 2014 - Journal of Biosciences 39 (2):303-317.
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  • How to Read ‘Heritability’ in the Recipe Approach to Natural Selection.Pierrick Bourrat - 2015 - British Journal for the Philosophy of Science 66 (4):883-903.
    There are two ways evolution by natural selection is conceptualized in the literature. One provides a ‘recipe’ for ENS incorporating three ingredients: variation, differences in fitness, and heritability. The other provides formal equations of evolutionary change and partitions out selection from other causes of evolutionary changes such as transmission biases or drift. When comparing the two approaches there seems to be a tension around the concept of heritability. A recent claim has been made that the recipe approach is flawed and (...)
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  • Levels of Selection Are Artefacts of Different Fitness Temporal Measures.Pierrick Bourrat - 2015 - Ratio 28 (1):40-50.
    In this paper I argue against the claim, recently put forward by some philosophers of biology and evolutionary biologists, that there can be two or more ontologically distinct levels of selection. I show by comparing the fitness of individuals with that of collectives of individuals in the same environment and over the same period of time – as required to decide if one or more levels of selection is acting in a population – that the selection of collectives is a (...)
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  • (2 other versions)Fitness (Stanford Encyclopedia of Philosophy).A. Rosenberg & F. Bouchard - 2011 - Stanford Encyclopedia of Philosophy. Web 17 (8):457-473.
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  • (1 other version)What is a symbiotic superindividual and how do you measure its fitness?Frédéric Bouchard - 2013 - In Frederic Bouchard & Philippe Huneman (eds.), From Groups to Individuals: Evolution and Emerging Individuality. Cambridge, Massachusetts: MIT Press. pp. 243.
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  • Cheats as first propagules: A new hypothesis for the evolution of individuality during the transition from single cells to multicellularity.Paul B. Rainey & Benjamin Kerr - 2010 - Bioessays 32 (10):872-880.
    The emergence of individuality during the evolutionary transition from single cells to multicellularity poses a range of problems. A key issue is how variation in lower‐level individuals generates a corporate (collective) entity with Darwinian characteristics. Of central importance to this process is the evolution of a means of collective reproduction, however, the evolution of a means of collective reproduction is not a trivial issue, requiring careful consideration of mechanistic details. Calling upon observations from experiments, we draw attention to proto‐life cycles (...)
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  • From survivors to replicators: evolution by natural selection revisited.Pierrick Bourrat - 2014 - Biology and Philosophy 29 (4):517-538.
    For evolution by natural selection to occur it is classically admitted that the three ingredients of variation, difference in fitness and heredity are necessary and sufficient. In this paper, I show using simple individual-based models, that evolution by natural selection can occur in populations of entities in which neither heredity nor reproduction are present. Furthermore, I demonstrate by complexifying these models that both reproduction and heredity are predictable Darwinian products (i.e. complex adaptations) of populations initially lacking these two properties but (...)
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  • From Groups to Individuals: Evolution and Emerging Individuality.Frederic Bouchard & Philippe Huneman (eds.) - 2013 - Cambridge, Massachusetts: MIT Press.
    Our intuitive assumption that only organisms are the real individuals in the natural world is at odds with developments in cell biology, ecology, genetics, evolutionary biology, and other fields. Although organisms have served for centuries as nature’s paradigmatic individuals, science suggests that organisms are only one of the many ways in which the natural world could be organized. When living beings work together—as in ant colonies, beehives, and bacteria-metazoan symbiosis—new collective individuals can emerge. In this book, leading scholars consider the (...)
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  • Group adaptation, formal darwinism and contextual analysis.Samir Okasha & Cedric Paternotte - 2012 - Journal of Evolutionary Biology 25 (6):1127–1139.
    We consider the question: under what circumstances can the concept of adaptation be applied to groups, rather than individuals? Gardner and Grafen (2009, J. Evol. Biol.22: 659–671) develop a novel approach to this question, building on Grafen's ‘formal Darwinism’ project, which defines adaptation in terms of links between evolutionary dynamics and optimization. They conclude that only clonal groups, and to a lesser extent groups in which reproductive competition is repressed, can be considered as adaptive units. We re-examine the conditions under (...)
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  • Darwinism without populations: a more inclusive understanding of the “Survival of the Fittest”.Frédéric Bouchard - 2011 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 42 (1):106-114.
    Following Wallace’s suggestion, Darwin framed his theory using Spencer’s expression “survival of the fittest”. Since then, fitness occupies a significant place in the conventional understanding of Darwinism, even though the explicit meaning of the term ‘fitness’ is rarely stated. In this paper I examine some of the different roles that fitness has played in the development of the theory. Whereas the meaning of fitness was originally understood in ecological terms, it took a statistical turn in terms of reproductive success throughout (...)
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  • Unto Others: The Evolution and Psychology of Unselfish Behavior.Elliott Sober & David Sloan Wilson - 1998 - Harvard University Press.
    The authors demonstrate that unselfish behavior is in fact an important feature of both biological and human nature. Their book provides a panoramic view of altruism throughout the animal kingdom--from self-sacrificing parasites to the human capacity for selflessness--even as it explains the evolutionary sense of such behavior.
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  • Evolution and the levels of selection.Samir Okasha - 2006 - New York: Oxford University Press.
    Does natural selection act primarily on individual organisms, on groups, on genes, or on whole species? The question of levels of selection - on which biologists and philosophers have long disagreed - is central to evolutionary theory and to the philosophy of biology. Samir Okasha's comprehensive analysis gives a clear account of the philosophical issues at stake in the current debate.
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  • Making things happen: a theory of causal explanation.James F. Woodward - 2003 - New York: Oxford University Press.
    Woodward's long awaited book is an attempt to construct a comprehensive account of causation explanation that applies to a wide variety of causal and explanatory claims in different areas of science and everyday life. The book engages some of the relevant literature from other disciplines, as Woodward weaves together examples, counterexamples, criticisms, defenses, objections, and replies into a convincing defense of the core of his theory, which is that we can analyze causation by appeal to the notion of manipulation.
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  • (1 other version)Causality: Models, Reasoning and Inference.Judea Pearl - 2000 - New York: Cambridge University Press.
    Causality offers the first comprehensive coverage of causal analysis in many sciences, including recent advances using graphical methods. Pearl presents a unified account of the probabilistic, manipulative, counterfactual and structural approaches to causation, and devises simple mathematical tools for analyzing the relationships between causal connections, statistical associations, actions and observations. The book will open the way for including causal analysis in the standard curriculum of statistics, artificial intelligence, business, epidemiology, social science and economics.
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  • The nature of selection: evolutionary theory in philosophical focus.Elliott Sober - 1984 - Chicago: University of Chicago Press.
    The Nature of Selection is a straightforward, self-contained introduction to philosophical and biological problems in evolutionary theory. It presents a powerful analysis of the evolutionary concepts of natural selection, fitness, and adaptation and clarifies controversial issues concerning altruism, group selection, and the idea that organisms are survival machines built for the good of the genes that inhabit them. "Sober's is the answering philosophical voice, the voice of a first-rate philosopher and a knowledgeable student of contemporary evolutionary theory. His book merits (...)
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  • Varieties of population structure and the levels of selection.Peter Godfrey-Smith - 2008 - British Journal for the Philosophy of Science 59 (1):25-50.
    Group-structured populations, of the kind prominent in discussions of multilevel selection, are contrasted with ‘neighbor-structured’ populations. I argue that it is a necessary condition on multilevel description of a selection process that there should be a nonarbitrary division of the population into equivalence classes (or an approximation to this situation). The discussion is focused via comparisons between two famous problem cases involving group structure (altruism and heterozygote advantage) and two neighbor-structured cases that resemble them. Conclusions are also drawn about the (...)
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  • Review of Woodward, M aking Things Happen. [REVIEW]Michael Strevens - 2007 - Philosophy and Phenomenological Research 74 (1):233–249.
    The concept of causation plays a central role in many philosophical theories, and yet no account of causation has gained widespread acceptance among those who have investigated its foundations. Theories based on laws, counterfactuals, physical processes, and probabilistic dependence and independence relations (the list is by no means exhaustive) have all received detailed treatment in recent years---{}and, while no account has been entirely successful, it is generally agreed that the concept has been greatly clari{}ed by the attempts. In this magni{}cent (...)
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  • Alternative formulations of multilevel selection.John Damuth & I. Lorraine Heisler - 1988 - Biology and Philosophy 3 (4):407-430.
    Hierarchical expansions of the theory of natural selection exist in two distinct bodies of thought in evolutionary biology, the group selection and the species selection traditions. Both traditions share the point of view that the principles of natural selection apply at levels of biological organization above the level of the individual organism. This leads them both to considermultilevel selection situations, where selection is occurring simultaneously at more than one level. Impeding unification of the theoretical approaches of the multilevel selection traditions (...)
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  • On the transfer of fitness from the cell to the multicellular organism.Richard E. Michod - 2005 - Biology and Philosophy 20 (5):967-987.
    The fitness of any evolutionary unit can be understood in terms of its two basic components: fecundity (reproduction) and viability (survival). Trade-offs between these fitness components drive the evolution of life-history traits in extant multicellular organisms. We argue that these trade-offs gain special significance during the transition from unicellular to multicellular life. In particular, the evolution of germ–soma specialization and the emergence of individuality at the cell group (or organism) level are also consequences of trade-offs between the two basic fitness (...)
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  • Physicalism, or Something Near Enough.Jaegwon Kim - 2005 - Princeton University Press.
    "This is a fine volume that clarifies, defends, and moves beyond the views that Kim presented in Mind in a Physical World.
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  • Physicalism, or Something near Enough.Jaegwon Kim - 2006 - Philosophical Quarterly 56 (223):306-310.
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  • Generalizing Contextual Analysis.Pierrick Bourrat - 2016 - Acta Biotheoretica 64 (2):197-217.
    Okasha, in Evolution and the Levels of Selection, convincingly argues that two rival statistical decompositions of covariance, namely contextual analysis and the neighbour approach, are better causal decompositions than the hierarchical Price approach. However, he claims that this result cannot be generalized in the special case of soft selection and argues that the Price approach represents in this case a better option. He provides several arguments to substantiate this claim. In this paper, I demonstrate that these arguments are flawed and (...)
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  • Gestalt-Switching and the Evolutionary Transitions.Peter Godfrey-Smith & Benjamin Kerr - 2013 - British Journal for the Philosophy of Science 64 (1):205-222.
    Formal methods developed for modeling levels of selection problems have recently been applied to the investigation of major evolutionary transitions. We discuss two new tools of this kind. First, the ‘near-variant test’ can be used to compare the causal adequacy of predictively equivalent representations. Second, ‘state-variable gestalt-switching’ can be used to gain a useful dual perspective on evolutionary processes that involve both higher and lower level populations.
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  • Causality: Models, reasoning and inference.Christopher Hitchcock - 2001 - Philosophical Review 110 (4):639-641.
    book reveiw van boek met gelijknamige titel van Judea Pearl.
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  • The Similarity of Causal Inference in Experimental and Non‐experimental Studies.Richard Scheines - 2005 - Philosophy of Science 72 (5):927-940.
    For nearly as long as the word “correlation” has been part of statistical parlance, students have been warned that correlation does not prove causation, and that only experimental studies, e.g., randomized clinical trials, can establish the existence of a causal relationship. Over the last few decades, somewhat of a consensus has emerged between statisticians, computer scientists, and philosophers on how to represent causal claims and connect them to probabilistic relations. One strand of this work studies the conditions under which evidence (...)
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  • Darwinian Populations and Natural Selection.Peter Godfrey-Smith - 2009 - Oxford, GB: Oxford University Press.
    The book presents a new way of understanding Darwinism and evolution by natural selection, combining work in biology, philosophy, and other fields.
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  • Re-engineering philosophy for limited beings: piecewise approximations to reality.William C. Wimsatt - 2007 - Cambridge: Harvard University Press.
    This book offers a philosophy for error-prone humans trying to understand messy systems in the real world.
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  • A critical review of philosophical work on the units of selection problem.Elliott Sober & David Sloan Wilson - 1994 - Philosophy of Science 61 (4):534-555.
    The evolutionary problem of the units of selection has elicited a good deal of conceptual work from philosophers. We review this work to determine where the issues now stand.
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  • (1 other version)Okasha’s Unintended Argument for Toolbox Theorizing.C. Kenneth Waters - 2011 - Philosophy and Phenomenological Research 82 (1):232-240.
    Okasha claims at the outset of his book "Evolution and the Levels of Selection" that the Price equation lays bare the fundamentals underlying all selection phenomena. However, the thoroughness of his subsequent analysis of multi-level selection theories leads him to abandon his fundamentalist commitments. At critical points he invokes cost benefit analyses that sometimes favors the Price approach and sometimes the contextual approach, sometimes favors MLS1 and sometimes MLS2. And although he doesn’t acknowledge it, even the Price approach breaks down (...)
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  • A levels-of-selection approach to evolutionary individuality.Ellen Clarke - 2016 - Biology and Philosophy 31 (6):893-911.
    What changes when an evolutionary transition in individuality takes place? Many different answers have been given, in respect of different cases of actual transition, but some have suggested a general answer: that a major transition is a change in the extent to which selection acts at one hierarchical level rather than another. The current paper evaluates some different ways to develop this general answer as a way to characterise the property ‘evolutionary individuality’; and offers a justification of the option taken (...)
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  • The Major Transitions in Evolution Revisited.Brett Calcott & Kim Sterelny (eds.) - 2011 - MIT Press.
    Drawing on recent advances in evolutionary biology, prominent scholars return to the question posed in a pathbreaking book: how evolution itself evolved.
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  • Individualist and multi-level perspectives on selection in structured populations.Benjamin Kerr & Peter Godfrey-Smith - 2002 - Biology and Philosophy 17 (4):477-517.
    Recent years have seen a renewed debate over the importance of groupselection, especially as it relates to the evolution of altruism. Onefeature of this debate has been disagreement over which kinds ofprocesses should be described in terms of selection at multiple levels,within and between groups. Adapting some earlier discussions, we presenta mathematical framework that can be used to explore the exactrelationships between evolutionary models that do, and those that donot, explicitly recognize biological groups as fitness-bearing entities.We show a fundamental set (...)
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  • Individuality and Selection.David L. Hull - 1980 - Annual Review of Ecology and Systematics 11:311-332.
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  • The confusions of fitness.André Ariew & Richard C. Lewontin - 2004 - British Journal for the Philosophy of Science 55 (2):347-363.
    The central point of this essay is to demonstrate the incommensurability of ‘Darwinian fitness’ with the numeric values associated with reproductive rates used in population genetics. While sometimes both are called ‘fitness’, they are distinct concepts coming from distinct explanatory schemes. Further, we try to outline a possible answer to the following question: from the natural properties of organisms and a knowledge of their environment, can we construct an algorithm for a particular kind of organismic life-history pattern that itself will (...)
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  • The Selfish Gene. [REVIEW]Gunther S. Stent & Richard Dawkins - 1977 - Hastings Center Report 7 (6):33.
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  • Adaptation and Natural Selection: A Critique of Some Current Evolutionary Thought.William C. Wimsatt - 1970 - Philosophy of Science 37 (4):620-623.
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  • (1 other version)Okasha’s Unintended Argument for Toolbox Theorizing.C. Kenneth Waters - 2011 - Philosophy and Phenomenological Research 82 (1):232-240.
    Okasha claims at the outset of his book "Evolution and the Levels of Selection" (2006) that the Price equation lays bare the fundamentals underlying all selection phenomena. However, the thoroughness of his subsequent analysis of multi-level selection theories leads him to abandon his fundamentalist commitments. At critical points he invokes cost benefit analyses that sometimes favors the Price approach and sometimes the contextual approach, sometimes favors MLS1 and sometimes MLS2. And although he doesn’t acknowledge it, even the Price approach breaks (...)
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  • Multispecies individuals.Pierrick Bourrat & Paul E. Griffiths - 2018 - History and Philosophy of the Life Sciences 40 (2):33.
    We assess the arguments for recognising functionally integrated multispecies consortia as genuine biological individuals, including cases of so-called ‘holobionts’. We provide two examples in which the same core biochemical processes that sustain life are distributed across a consortium of individuals of different species. Although the same chemistry features in both examples, proponents of the holobiont as unit of evolution would recognize one of the two cases as a multispecies individual whilst they would consider the other as a compelling case of (...)
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  • Holistic Darwinism: Synergy, Cybernetics, and the Bioeconomics of Evolution.Peter Corning - 2005 - University of Chicago Press.
    In recent years, evolutionary theorists have come to recognize that the reductionist, individualist, gene-centered approach to evolution cannot sufficiently account for the emergence of complex biological systems over time. Peter A. Corning has been at the forefront of a new generation of complexity theorists who have been working to reshape the foundations of evolutionary theory. Well known for his Synergism Hypothesis—a theory of complexity in evolution that assigns a key causal role to various forms of functional synergy—Corning puts this theory (...)
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  • Causal processes, fitness, and the differential persistence of lineages.Frédéric Bouchard - 2008 - Philosophy of Science 75 (5):560-570.
    Ecological fitness has been suggested to provide a unifying definition of fitness. However, a metric for this notion of fitness was in most cases unavailable except by proxy with differential reproductive success. In this article, I show how differential persistence of lineages can be used as a way to assess ecological fitness. This view is inspired by a better understanding of the evolution of some clonal plants, colonial organisms, and ecosystems. Differential persistence shows the limitation of an ensemblist noncausal understanding (...)
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