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Scaffolding Natural Selection

Biological Theory 17 (2):163-180 (2022)

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  1. The Spandrels of San Marco and the Panglossian Paradigm: A Critique of the Adaptationist Programme.S. J. Gould & R. C. Lewontin - 1994 - In Elliott Sober (ed.), Conceptual Issues in Evolutionary Biology. The Mit Press. Bradford Books. pp. 73-90.
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  • Typological versus population thinking.Ernst Mayr - 1994 - In Elliott Sober (ed.), Conceptual Issues in Evolutionary Biology. The Mit Press. Bradford Books. pp. 157--160.
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  • Model Anarchism.Walter Veit - 2020
    This paper constitutes a radical departure from the existing philosophical literature on models, modeling-practices, and model-based science. I argue that the various entities and practices called 'models' and 'modeling-practices' are too diverse, too context-sensitive, and serve too many scientific purposes and roles, as to allow for a general philosophical analysis. From this recognition an alternative view emerges that I shall dub model anarchism.
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  • Evolution and the levels of selection.Samir Okasha - 2006 - New York: Oxford University Press.
    Does natural selection act primarily on individual organisms, on groups, on genes, or on whole species? The question of levels of selection - on which biologists and philosophers have long disagreed - is central to evolutionary theory and to the philosophy of biology. Samir Okasha's comprehensive analysis gives a clear account of the philosophical issues at stake in the current debate.
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  • Marsupial lions and methodological omnivory: function, success and reconstruction in paleobiology.Adrian Currie - 2015 - Biology and Philosophy 30 (2):187-209.
    Historical scientists frequently face incomplete data, and lack direct experimental access to their targets. This has led some philosophers and scientists to be pessimistic about the epistemic potential of the historical sciences. And yet, historical science often produces plausible, sophisticated hypotheses. I explain this capacity to generate knowledge in the face of apparent evidential scarcity by examining recent work on Thylacoleo carnifex, the ‘marsupial lion’. Here, we see two important methodological features. First, historical scientists are methodological omnivores, that is, they (...)
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  • The Problem of Biological Individuality.Ellen Clarke - 2010 - Biological Theory 5 (4):312-325.
    Darwin’s classic ‘Origin of Species’ (Darwin 1859) described forces of selection acting upon individuals, but there remains a great deal of controversy about what exactly the status and definition of a biological individual is. Recently some authors have argued that the individual is dispensable – that an inability to pin it down is not problematic because little rests on it anyway. The aim of this paper is to show that there is a real problem of biological individuality, and an urgent (...)
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  • From survivors to replicators: evolution by natural selection revisited.Pierrick Bourrat - 2014 - Biology and Philosophy 29 (4):517-538.
    For evolution by natural selection to occur it is classically admitted that the three ingredients of variation, difference in fitness and heredity are necessary and sufficient. In this paper, I show using simple individual-based models, that evolution by natural selection can occur in populations of entities in which neither heredity nor reproduction are present. Furthermore, I demonstrate by complexifying these models that both reproduction and heredity are predictable Darwinian products (i.e. complex adaptations) of populations initially lacking these two properties but (...)
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  • The Philosophy of Social Evolution.Jonathan Birch - 2017 - Oxford: Oxford University Press.
    From mitochondria to meerkats, the natural world is full of spectacular examples of social behaviour. In the early 1960s W. D. Hamilton changed the way we think about how such behaviour evolves. He introduced three key innovations - now known as Hamilton's rule, kin selection, and inclusive fitness - and his pioneering work kick-started a research program now known as social evolution theory. This is a book about the philosophical foundations and future prospects of that program. [Note: only the Introduction (...)
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  • The origin of species by means of natural selection.Charles Darwin - 1859 - Franklin Center, Pa.: Franklin Library. Edited by J. W. Burrow.
    ORIGIN OF SPECIES. INTRODUCTION. When on board HMS 'Beagle,' as naturalist, I was ranch struck with certain facts in the distribution of the organic beings ...
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  • On the Origin of Species by Means of Natural Selection.Charles Darwin - 1897 - New York: Heritage Press. Edited by George W. Davidson.
    ... Difficulty of distinguishing between Varieties and Species — Origin of Domestic ... and Origin— Principle of Selection anciently followed, its Effects— ...
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  • The mind, the lab, and the field: Three kinds of populations in scientific practice.Rasmus Grønfeldt Winther, Ryan Giordano, Michael D. Edge & Rasmus Nielsen - 2015 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 52:12-21.
    Scientists use models to understand the natural world, and it is important not to conflate model and nature. As an illustration, we distinguish three different kinds of populations in studies of ecology and evolution: theoretical, laboratory, and natural populations, exemplified by the work of R.A. Fisher, Thomas Park, and David Lack, respectively. Biologists are rightly concerned with all three types of populations. We examine the interplay between these different kinds of populations, and their pertinent models, in three examples: the notion (...)
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  • Pluralism in evolutionary controversies: styles and averaging strategies in hierarchical selection theories.Rasmus Grønfeldt Winther, Michael J. Wade & Christopher C. Dimond - 2013 - Biology and Philosophy 28 (6):957-979.
    Two controversies exist regarding the appropriate characterization of hierarchical and adaptive evolution in natural populations. In biology, there is the Wright-Fisher controversy over the relative roles of random genetic drift, natural selection, population structure, and interdemic selection in adaptive evolution begun by Sewall Wright and Ronald Aylmer Fisher. There is also the Units of Selection debate, spanning both the biological and the philosophical literature and including the impassioned group-selection debate. Why do these two discourses exist separately, and interact relatively little? (...)
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  • Reintroducing group selection to the human behavioral sciences.David Sloan Wilson & Elliott Sober - 1994 - Behavioral and Brain Sciences 17 (4):585-608.
    In both biology and the human sciences, social groups are sometimes treated as adaptive units whose organization cannot be reduced to individual interactions. This group-level view is opposed by a more individualistic one that treats social organization as a byproduct of self-interest. According to biologists, group-level adaptations can evolve only by a process of natural selection at the group level. Most biologists rejected group selection as an important evolutionary force during the 1960s and 1970s but a positive literature began to (...)
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  • Nancy Cartwright. Nature, the Artful Modeler: Lectures on Laws, Science, How Nature Arranges the World and How We Can Arrange It Better. [REVIEW]Walter Veit - 2021 - Philosophy of Science 88 (2):366-369.
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  • Model anarchism.Walter Veit - 2023 - Theoria: Revista de Teoría, Historia y Fundamentos de la Ciencia 38 (2):225-245.
    This paper aims to articulate an anarchist challenge to a widespread assumption in the rapidly growing philosophical literature on models, modeling-practices, and model-based science. I argue that the various entities and practices called “models” and “modeling-practices” are too heterogeneous, too context-sensitive, and serve too many scientific purposes and roles, as to constitute unified scientific phenomena that would allow for useful epistemic and ontologies analyses. Just like Feyerabend once argued that there are no general useful inferences to be drawn about the (...)
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  • Metaphors in arts and science.Walter Veit & Ney Milan - 2021 - European Journal for Philosophy of Science 11 (2):1-24.
    Metaphors abound in both the arts and in science. Due to the traditional division between these enterprises as one concerned with aesthetic values and the other with epistemic values there has unfortunately been very little work on the relation between metaphors in the arts and sciences. In this paper, we aim to remedy this omission by defending a continuity thesis regarding the function of metaphor across both domains, that is, metaphors fulfill any of the same functions in science as they (...)
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  • Model Pluralism.Walter Veit - 2019 - Philosophy of the Social Sciences 50 (2):91-114.
    This paper introduces and defends an account of model-based science that I dub model pluralism. I argue that despite a growing awareness in the philosophy of science literature of the multiplicity, diversity, and richness of models and modeling practices, more radical conclusions follow from this recognition than have previously been inferred. Going against the tendency within the literature to generalize from single models, I explicate and defend the following two core theses: any successful analysis of models must target sets of (...)
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  • Health, consciousness, and the evolution of subjects.Walter Veit - 2022 - Synthese 201 (1):1-24.
    The goal of this programmatic paper is to highlight a close connection between the core problem in the philosophy of medicine, i.e. the concept of health, and the core problem of the philosophy of mind, i.e. the concept of consciousness. I show when we look at these phenomena together, taking the evolutionary perspective of modern state-based behavioural and life-history theory used as the teleonomic tool to Darwinize the agent- and subject-side of organisms, we will be in a better position to (...)
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  • Evolution of multicellularity: cheating done right.Walter Veit - 2019 - Biology and Philosophy 34 (3):34.
    For decades Darwinian processes were framed in the form of the Lewontin conditions: reproduction, variation and differential reproductive success were taken to be sufficient and necessary. Since Buss and the work of Maynard Smith and Szathmary biologists were eager to explain the major transitions from individuals to groups forming new individuals subject to Darwinian mechanisms themselves. Explanations that seek to explain the emergence of a new level of selection, however, cannot employ properties that would already have to exist on that (...)
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  • Agential thinking.Walter Veit - 2021 - Synthese 199 (5):13393-13419.
    In his 2009 monograph, Darwinian Populations and Natural Selection, Peter Godfrey-Smith accuses biologists of demonstrating ‘Darwinian Paranoia’ when they engage in what he dubs ‘agential thinking’. But as Daniel Dennett points out, he offers neither an illuminating set of examples nor an extended argument for this assertion, deeming it to be a brilliant propaganda stroke against what is actually a useful way of thinking. Compared to the dangers of teleological thinking in biology, the dangers of agential thinking have unfortunately rarely (...)
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  • Explanations in search of observations.Robert Sugden - 2011 - Biology and Philosophy 26 (5):717-736.
    The paper explores how, in economics and biology, theoretical models are used as explanatory devices. It focuses on a modelling strategy by which, instead of starting with an unexplained regularity in the world, the modeller begins by creating a credible model world. The model world exhibits a regularity, induced by a mechanism in that world. The modeller concludes that there may be a part of the real world in which a similar regularity occurs and that, were that the case, the (...)
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  • Minds: extended or scaffolded?Kim Sterelny - 2010 - Phenomenology and the Cognitive Sciences 9 (4):465-481.
    This paper discusses two perspectives, each of which recognises the importance of environmental resources in enhancing and amplifying our cognitive capacity. One is the Clark–Chalmers model, extended further by Clark and others. The other derives from niche construction models of evolution, models which emphasise the role of active agency in enhancing the adaptive fit between agent and world. In the human case, much niche construction is epistemic: making cognitive tools and assembling other informational resources that support and scaffold intelligent action. (...)
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  • Cheats as first propagules: A new hypothesis for the evolution of individuality during the transition from single cells to multicellularity.Paul B. Rainey & Benjamin Kerr - 2010 - Bioessays 32 (10):872-880.
    The emergence of individuality during the evolutionary transition from single cells to multicellularity poses a range of problems. A key issue is how variation in lower‐level individuals generates a corporate (collective) entity with Darwinian characteristics. Of central importance to this process is the evolution of a means of collective reproduction, however, the evolution of a means of collective reproduction is not a trivial issue, requiring careful consideration of mechanistic details. Calling upon observations from experiments, we draw attention to proto‐life cycles (...)
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  • Thirty years of Biology & Philosophy: philosophy of which biology?Thomas Pradeu - 2017 - Biology and Philosophy 32 (2):149-167.
    Which domains of biology do philosophers of biology primarily study? The fact that philosophy of biology has been dominated by an interest for evolutionary biology is widely admitted, but it has not been strictly demonstrated. Here I analyse the topics of all the papers published in Biology & Philosophy, just as the journal celebrates its thirtieth anniversary. I then compare the distribution of biological topics in Biology & Philosophy with that of the scientific journal Proceedings of the National Academy of (...)
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  • The strategy of endogenization in evolutionary biology.Samir Okasha - 2018 - Synthese 198 (Suppl 14):3413-3435.
    Evolutionary biology is striking for its ability to explain a large and diverse range of empirical phenomena on the basis of a few general theoretical principles. This article offers a philosophical perspective on the way that evolutionary biology has come to achieve such impressive generality, by focusing on “the strategy of endogenization”. This strategy involves devising evolutionary explanations for biological features that were originally part of the background conditions, or scaffolding, against which such explanations take place. Where successful, the strategy (...)
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  • Why won't the group selection controversy go away?Samir Okasha - 2001 - British Journal for the Philosophy of Science 52 (1):25-50.
    The group selection controversy is about whether natural selection ever operates at the level of groups, rather than at the level of individual organisms. Traditionally, group selection has been invoked to explain the existence of altruistic behaviour in nature. However, most contemporary evolutionary biologists are highly sceptical of the hypothesis of group selection, which they regard as biologically implausible and not needed to explain the evolution of altruism anyway. But in their recent book, Elliot Sober and David Sloan Wilson [1998] (...)
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  • Microbes modeling ontogeny.Alan C. Love & Michael Travisano - 2013 - Biology and Philosophy 28 (2):161-188.
    Model organisms are central to contemporary biology and studies of embryogenesis in particular. Biologists utilize only a small number of species to experimentally elucidate the phenomena and mechanisms of development. Critics have questioned whether these experimental models are good representatives of their targets because of the inherent biases involved in their selection (e.g., rapid development and short generation time). A standard response is that the manipulative molecular techniques available for experimental analysis mitigate, if not counterbalance, this concern. But the most (...)
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  • The generational cycle of state spaces and adequate genetical representation.Elisabeth A. Lloyd, Richard C. Lewontin & and Marcus W. Feldman - 2008 - Philosophy of Science 75 (2):140-156.
    Most models of generational succession in sexually reproducing populations necessarily move back and forth between genic and genotypic spaces. We show that transitions between and within these spaces are usually hidden by unstated assumptions about processes in these spaces. We also examine a widely endorsed claim regarding the mathematical equivalence of kin-, group-, individual-, and allelic-selection models made by Lee Dugatkin and Kern Reeve. We show that the claimed mathematical equivalence of the models does not hold. *Received January 2007; revised (...)
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  • The Generational Cycle of State Spaces and Adequate Genetical Representation.Elisabeth A. Lloyd, Richard C. Lewontin & Marcus W. Feldman - 2008 - Philosophy of Science 75 (2):140-156.
    Most models of generational succession in sexually reproducing populations necessarily move back and forth between genic and genotypic spaces. We show that transitions between and within these spaces are usually hidden by unstated assumptions about processes in these spaces. We also examine a widely endorsed claim regarding the mathematical equivalence of kin-, group-, individual-, and allelic-selection models made by Lee Dugatkin and Kern Reeve. We show that the claimed mathematical equivalence of the models does not hold.
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  • Reproduction in Complex Life Cycles: Toward a Developmental Reaction Norms Perspective.James Griesemer - 2016 - Philosophy of Science 83 (5):803-815.
    Biological reproduction is a material process of intertwined, recursive propagule generation and development, assuming that development produces simple life cycles. Most organisms, however, have more or less complex life cycles. Here, I attempt to reconcile recent articulations of a reproducer account with traditional approaches to complex life cycles by generalizing genetic demarcation criteria for life cycle generations in terms of the “scaffolded” development of hybrid reproducers. I argue that scaffolding provides a general method for identifying developmental bottlenecks and suggests in (...)
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  • Populational heritability: Extending punnett square concepts to evolution at the metapopulation level. [REVIEW]James R. Griesemer & Michael J. Wade - 2000 - Biology and Philosophy 15 (1):1-17.
    In a previous study, using experimental metapopulations of the flour beetle, Tribolium castaneum, we investigated phase III of Wright's shifting balance process (Wade and Griesemer 1998). We experimentally modeled migration of varying amounts from demes of high mean fitness into demes of lower mean fitness (as in Wright's characterization of phase III) as well as the reciprocal (the opposite of phase III). We estimated the meta-populational heritability for this level of selection by regression of offspring deme means on the weighted (...)
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  • Material Evidence.Alison Wylie & Robert Chapman (eds.) - 2014 - New York / London: Routledge.
    How do archaeologists make effective use of physical traces and material culture as repositories of evidence? Material Evidence is a collection of 19 essays that take a resolutely case-based approach to this question, exploring key instances of exemplary practice, instructive failures, and innovative developments in the use of archaeological data as evidence. The goal is to bring to the surface the wisdom of practice, teasing out norms of archaeological reasoning from evidence. -/- Archaeologists make compelling use of an enormously diverse (...)
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  • Organisms, Agency, and Evolution.D. M. Walsh - 2015 - Cambridge University Press.
    The central insight of Darwin's Origin of Species is that evolution is an ecological phenomenon, arising from the activities of organisms in the 'struggle for life'. By contrast, the Modern Synthesis theory of evolution, which rose to prominence in the twentieth century, presents evolution as a fundamentally molecular phenomenon, occurring in populations of sub-organismal entities - genes. After nearly a century of success, the Modern Synthesis theory is now being challenged by empirical advances in the study of organismal development and (...)
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  • The Growth of Biological Thought: Diversity, Evolution, and Inheritance.Ernst Mayr - 1982 - Harvard University Press.
    Explores the development of the ideas of evolutionary biology, particularly as affected by the increasing understanding of genetics and of the chemical basis of inheritance.
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  • Mind and Cosmos: Why the Materialist Neo-Darwinian Conception of Nature is Almost Certainly False.Thomas Nagel - 2012 - New York, US: Oxford University Press.
    The modern materialist approach to life has conspicuously failed to explain such central mind-related features of our world as consciousness, intentionality, meaning, and value. This failure to account for something so integral to nature as mind, argues philosopher Thomas Nagel, is a major problem, threatening to unravel the entire naturalistic world picture, extending to biology, evolutionary theory, and cosmology. Since minds are features of biological systems that have developed through evolution, the standard materialist version of evolutionary biology is fundamentally incomplete. (...)
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  • The Major Transitions in Evolution Revisited.Brett Calcott & Kim Sterelny (eds.) - 2011 - MIT Press.
    Drawing on recent advances in evolutionary biology, prominent scholars return to the question posed in a pathbreaking book: how evolution itself evolved.
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  • Darwinian Populations and Natural Selection.Peter Godfrey-Smith - 2009 - Oxford, GB: Oxford University Press.
    The book presents a new way of understanding Darwinism and evolution by natural selection, combining work in biology, philosophy, and other fields.
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  • The triple helix: gene, organism, and environment.Richard C. Lewontin - 2000 - Cambridge, Mass.: Harvard University Press. Edited by Richard C. Lewontin.
    One of our most brilliant evolutionary biologists, Richard Lewontin has also been a leading critic of those--scientists and non-scientists alike--who would misuse the science to which he has contributed so much. In The Triple Helix, Lewontin the scientist and Lewontin the critic come together to provide a concise, accessible account of what his work has taught him about biology and about its relevance to human affairs. In the process, he exposes some of the common and troubling misconceptions that misdirect and (...)
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  • Complexity and the Function of Mind in Nature.Peter Godfrey-Smith (ed.) - 1996 - New York: Cambridge University Press.
    This book explains the relationship between intelligence and environmental complexity, and in so doing links philosophy of mind to more general issues about the relations between organisms and environments, and to the general pattern of 'externalist' explanations. The author provides a biological approach to the investigation of mind and cognition in nature. In particular he explores the idea that the function of cognition is to enable agents to deal with environmental complexity. The history of the idea in the work of (...)
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  • The Growth of Biological Thought: Diversity, Evolution, and Inheritance. [REVIEW]Ernst Mayr - 1985 - Journal of the History of Biology 18 (1):145-153.
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  • Replication and reproduction.John Wilkins & Pierrick Bourrat - 2018 - Stanford Encyclopedia of Philosophy.
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  • Units and levels of selection.Elisabeth Lloyd - 2008 - Stanford Encyclopedia of Philosophy.
    The theory of evolution by natural selection is, perhaps, the crowning intellectual achievement of the biological sciences. There is, however, considerable debate about which entity or entities are selected and what it is that fits them for that role. This article aims to clarify what is at issue in these debates by identifying four distinct, though often confused, concerns and then identifying how the debates on what constitute the units of selection depend to a significant degree on which of these (...)
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  • Is evolvability evolvable?Massimo Pigliucci - 2008 - Nature Reviews Genetics 9:75-82.
    In recent years, biologists have increasingly been asking whether the ability to evolve — the evolvability — of biological systems, itself evolves, and whether this phenomenon is the result of natural selection or a by-product of other evolutionary processes. The concept of evolvability, and the increasing theoretical and empirical literature that refers to it, may constitute one of several pillars on which an extended evolutionary synthesis will take shape during the next few years, although much work remains to be done (...)
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  • The Major Transitions in Evolution.John Maynard Smith & Eörs Szathmáry - 1996 - Journal of the History of Biology 29 (1):151-152.
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  • Eternal Metaphors of Palaeontology.Stephen Jay Gould - unknown
    Alexander wept at the height of his triumphs because he had no new worlds to conquer. Whitehead declared that all of philosophy had been a footnote to Plato. The Preacher exclaimed (Ecclesiastes 1:10): "Is there any thing whereof it may be said, See, this is new? It hath been already of old time, which was..
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  • The niche construction perspective: a critical appraisal.Thomas C. Scott-Phillips, Kevin N. Laland, David M. Shuker, Thomas E. Dickins & Stuart A. West - unknown
    Niche construction refers to the activities of organisms that bring about changes in their environments, many of which are evolutionarily and ecologically consequential. Advocates of niche construction theory (NCT) believe that standard evolutionary theory fails to recognize the full importance of niche construction, and consequently propose a novel view of evolution, in which niche construction and its legacy over time (ecological inheritance) are described as evolutionary processes, equivalent in importance to natural selection. Here, we subject NCT to critical evaluation, in (...)
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  • Knowing your ancestors: themes in the history of evo-devo. Raff - 2003 - Evolution & Development 5:327–330.
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  • Newton's Scaffolding: The Instrumental Roles of His Optical Hypotheses.Kirsten Walsh - 2019 - In Peter R. Anstey & Alberto Vanzo (eds.), Experiment, Speculation and Religion in Early Modern Philosophy. New York: Routledge.
    Early modern experimental philosophers often appear to commit to and utilise corpuscular and mechanical hypotheses. This is somewhat mysterious, for such hypotheses frequently appear to be simply assumed, which is odd for a research program which emphasises the careful experimental accumulation of facts. Isaac Newton was one such experimental philosopher, and his optical work is considered a clear example of the experimental method. Focusing on his optical investigations, Walsh identifies three roles for hypotheses. First, Newton introduces a hypothesis to explicate (...)
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  • Environmental complexity and the evolution of cognition.Peter Godfrey-Smith - 2002 - In Robert J. Sternberg & J. Kaufman (eds.), The Evolution of Intelligence. Lawrence Erlbaum. pp. 233--249.
    One problem faced in discussions of the evolution of intelligence is the need to get a precise fix on what is to be explained. Terms like "intelligence," "cognition" and "mind" do not have simple and agreed-upon meanings, and the differences between conceptions of intelligence have consequences for evolutionary explanation. I hope the papers in this volume will enable us to make progress on this problem. The present contribution is mostly focused on these basic and foundational issues, although the last section (...)
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  • Ecological scaffolding and the evolution of individuality.Andrew Black, Pierrick Bourrat & Paul Rainey - 2020 - Nature Ecology and Evolution 4:426–436.
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