Switch to: References

Add citations

You must login to add citations.
  1. Functions in Basic Formal Ontology.Andrew D. Spear, Werner Ceusters & Barry Smith - 2016 - Applied ontology 11 (2):103-128.
    The notion of function is indispensable to our understanding of distinctions such as that between being broken and being in working order (for artifacts) and between being diseased and being healthy (for organisms). A clear account of the ontology of functions and functioning is thus an important desideratum for any top-level ontology intended for application to domains such as engineering or medicine. The benefit of using top-level ontologies in applied ontology can only be realized when each of the categories identified (...)
    Download  
     
    Export citation  
     
    Bookmark   7 citations  
  • An Ontological Approach to Territorial Disputes.Neil Otte, Brian Donohue & Barry Smith - 2014 - In Semantic Technology in Intelligence, Defense and Security (STIDS), CEUR, vol. 1304. CEUR. pp. 2-9.
    Disputes over territory are a major contributing factor to the disruption of international relations. We believe that a cumulative, integrated, and continuously updated resource providing information about such disputes in an easily accessible form would be of benefit to intelligence analysts, military strategists, political scientists, and also to historians and others concerned with international disputes. We propose an ontology-based strategy for creating such a resource. The resource will contain information about territorial disputes, arguments for and against claims pertaining to sovereignty, (...)
    Download  
     
    Export citation  
     
    Bookmark   1 citation  
  • Foundations for a Realist Ontology of Mental Disease.Werner Ceusters & Barry Smith - 2010 - Journal of Biomedical Semantics 1 (10):1-23.
    While classifications of mental disorders have existed for over one hundred years, it still remains unspecified what terms such as 'mental disorder', 'disease' and 'illness' might actually denote. While ontologies have been called in aid to address this shortfall since the GALEN project of the early 1990s, most attempts thus far have sought to provide a formal description of the structure of some pre-existing terminology or classification, rather than of the corresponding structures and processes on the side of the patient. (...)
    Download  
     
    Export citation  
     
    Bookmark   13 citations  
  • Ontological Realism: A Methodology for Coordinated Evolution of Scientific Ontologies.Barry Smith & Werner Ceusters - 2010 - Applied Ontology 5 (3):139-188.
    Since 2002 we have been testing and refining a methodology for ontology development that is now being used by multiple groups of researchers in different life science domains. Gary Merrill, in a recent paper in this journal, describes some of the reasons why this methodology has been found attractive by researchers in the biological and biomedical sciences. At the same time he assails the methodology on philosophical grounds, focusing specifically on our recommendation that ontologies developed for scientific purposes should be (...)
    Download  
     
    Export citation  
     
    Bookmark   34 citations  
  • Ontological Realism: Methodology or Misdirection?Gary H. Merrill - 2010 - Applied Ontology 5 (2):79-108.
    In a series of papers over a period of several years Barry Smith andWerner Ceusters have offered a number of cogent criticisms of historical approaches to creating, maintaining, and applying biomedical terminologies and ontologies. And they have urged the adoption of what they refer to as a “realism-based” approach. Indeed, at times they insist that the realism-based approach not only offers clear advantages and a well-founded methodological basis for ontology development and evaluation, but that such a realist perspective is in (...)
    Download  
     
    Export citation  
     
    Bookmark   12 citations  
  • Semantics in Support of Biodiversity: An Introduction to the Biological Collections Ontology and Related Ontologies.Ramona L. Walls, John Deck, Robert Guralnik, Steve Baskauf, Reed Beaman, Stanley Blum, Shawn Bowers, Pier Luigi Buttigieg, Neil Davies, Dag Endresen, Maria Alejandra Gandolfo, Robert Hanner, Alyssa Janning, Barry Smith & Others - 2014 - PLoS ONE 9 (3):1-13.
    The study of biodiversity spans many disciplines and includes data pertaining to species distributions and abundances, genetic sequences, trait measurements, and ecological niches, complemented by information on collection and measurement protocols. A review of the current landscape of metadata standards and ontologies in biodiversity science suggests that existing standards such as the Darwin Core terminology are inadequate for describing biodiversity data in a semantically meaningful and computationally useful way. Existing ontologies, such as the Gene Ontology and others in the Open (...)
    Download  
     
    Export citation  
     
    Bookmark   3 citations  
  • Clinical Data Wrangling Using Ontological Realism and Referent Tracking.Werner Ceusters, Chiun Yu Hsu & Barry Smith - 2014 - In Proceedings of the Fifth International Conference on Biomedical Ontology (ICBO), Houston, 2014, (CEUR, 1327). pp. 27-32.
    Ontological realism aims at the development of high quality ontologies that faithfully represent what is general in reality and to use these ontologies to render heterogeneous data collections comparable. To achieve this second goal for clinical research datasets presupposes not merely (1) that the requisite ontologies already exist, but also (2) that the datasets in question are faithful to reality in the dual sense that (a) they denote only particulars and relationships between particulars that do in fact exist and (b) (...)
    Download  
     
    Export citation  
     
    Bookmark  
  • ROMAIN: Towards a BFO Compliant Reference Ontology for Industrial Maintenance.Mohamed Hedi Karray, Farhad Ameri, Melinda Hodkiewicz & Thierry Louge - 2019 - Applied Ontology 14 (2):155-177.
    Download  
     
    Export citation  
     
    Bookmark   2 citations  
  • From Falsemakers to Negative Properties.Michele Paolini Paoletti - 2017 - Theoria 83 (1):53-77.
    I shall argue in this article that, if we need to admit of negative facts in our ontology as falsemakers of false propositions, then it is plausible to accept that there are also negative properties conceived of as modes. After having briefly recalled the falsemaker argument, I shall explore five different alternative interpretations of negative facts and I shall demonstrate that each alternative – except for the one involving negative properties – is affected by some problems. Later on, I shall (...)
    Download  
     
    Export citation  
     
    Bookmark   2 citations