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  1. Overextension: the extended mind and arguments from evolutionary biology. [REVIEW]Armin W. Schulz - 2013 - European Journal for Philosophy of Science 3 (2):241-255.
    I critically assess two widely cited evolutionary biological arguments for two versions of the ‘Extended Mind Thesis’ (EMT): namely, an argument appealing to Dawkins’s ‘Extended Phenotype Thesis’ (EPT) and an argument appealing to ‘Developmental Systems Theory’ (DST). Specifically, I argue that, firstly, appealing to the EPT is not useful for supporting the EMT (in either version), as it is structured and motivated too differently from the latter to be able to corroborate or elucidate it. Secondly, I extend and defend Rupert’s (...)
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  • Culture in humans and other animals.Grant Ramsey - 2013 - Biology and Philosophy 28 (3):457-479.
    The study of animal culture is a flourishing field, with culture being recorded in a wide range of taxa, including non-human primates, birds, cetaceans, and rodents. In spite of this research, however, the concept of culture itself remains elusive. There is no universally assented to concept of culture, and there is debate over the connection between culture and related concepts like tradition and social learning. Furthermore, it is not clear whether culture in humans and culture in non-human animals is really (...)
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  • (1 other version)The Historical Transformation of Individual Concepts into Populational Ones: An Explanatory Shift in the Gestation of the Modern Synthesis.Tiago Rama - manuscript
    In this paper, I will conduct three interrelated analyses. First, I will develop an analysis of various concepts in the history of biology that used to refer to individual-level phenomena but were then reinterpreted by the Modern Synthesis in terms of populations. Second, I argue that a similar situation can be found in contemporary biological theory. While different approaches reflect on the causal role of developing organisms in evolution, proponents of the Modern Synthesis avoid any substantial change by reinterpreting and (...)
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  • Agential Teleosemantics.Tiago Rama - 2022 - Dissertation, Autonomous University of Barcelona
    The field of the philosophy of biology is flourishing in its aim to evaluate and rethink the view inherited from the previous century ---the Modern Synthesis. Different research areas and theories have come to the fore in the last decades in order to account for different biological phenomena that, in the first instance, fall beyond the explanatory scope of the Modern Synthesis. This thesis is anchored and motivated by this revolt in the philosophy of biology. -/- The central target in (...)
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  • Signs of Consciousness?Eva Jablonka - 2021 - Biosemiotics 14 (1):25-29.
    In this commentary I expand on the first of Noble’s illusions, the selection metaphor. Building on my work with Simona Ginsburg on the evolution of minimal consciousness, I argue that the existence of some complex sensory and motor patterns in the living world can be accounted for only through the evolution of conscious choice.
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  • Philosophy of immunology.Bartlomiej Swiatczak & Alfred I. Tauber - 2020 - Stanford Encyclopedia of Philosophy 2020.
    Philosophy of immunology is a subfield of philosophy of biology dealing with ontological and epistemological issues related to the studies of the immune system. While speculative investigations and abstract analyses have always been part of immune theorizing, until recently philosophers have largely ignored immunology. Yet the implications for understanding the philosophical basis of organismal functions framed by immunity offer new perspectives on fundamental questions of biology and medicine. Developed in the context of history of medicine, theoretical biology, and medical anthropology, (...)
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  • Mutationism, not Lamarckism, captures the novelty of CRISPR–Cas.Jeremy G. Wideman, S. Andrew Inkpen, W. Ford Doolittle & Rosemary J. Redfield - 2019 - Biology and Philosophy 34 (1):12.
    Koonin, in an article in this issue, claims that CRISPR–Cas systems are mechanisms for the inheritance of acquired adaptive characteristics, and that the operation of such systems comprises a “Lamarckian mode of evolution.” We argue that viewing the CRISPR–Cas mechanism as facilitating a form of “directed mutation” more accurately represents how the system behaves and the history of neoDarwinian thinking, and is to be preferred.
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  • CRISPR-Cas immunity: beyond nonself and defence.Thomas Pradeu & Jean-François Moreau - 2019 - Biology and Philosophy 34 (1):6.
    In this commentary of Koonin’s target paper, we defend an extended view of CRISPR-Cas immunity by arguing that CRISPR-Cas includes, but cannot be reduced to, defence against nonself. CRISPR-Cas systems can target endogenous elements and tolerate exogenous elements. We conclude that the vocabulary of “defence” and “nonself” might be misleading when describing CRISPR-Cas systems.
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  • The Extended (Evolutionary) Synthesis Debate: Where Science Meets Philosophy.Massimo Pigliucci & Leonard Finkelman - 2015 - BioScience 64 (6):511-516.
    Recent debates between proponents of the modern evolutionary synthesis (the standard model in evolutionary biology) and those of a possible extended synthesis are a good example of the fascinating tangle among empirical, theoretical, and conceptual or philosophical matters that is the practice of evolutionary biology. In this essay, we briefly discuss two case studies from this debate, highlighting the relevance of philosophical thinking to evolutionary biologists in the hope of spurring further constructive cross-pollination between the two fields.
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  • Lamarckism and epigenetic inheritance: a clarification.Laurent Loison - 2018 - Biology and Philosophy 33 (3-4):29.
    Since the 1990s, the terms “Lamarckism” and “Lamarckian” have seen a significant resurgence in biological publications. The discovery of new molecular mechanisms have been interpreted as evidence supporting the reality and efficiency of the inheritance of acquired characters, and thus the revival of Lamarckism. The present paper aims at giving a critical evaluation of such interpretations. I argue that two types of arguments allow to draw a clear distinction between the genuine Lamarckian concept of inheritance of acquired characters and transgenerational (...)
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  • The social brain meets the reactive genome: neuroscience, epigenetics and the new social biology.Maurizio Meloni - 2014 - Frontiers in Human Neuroscience 8.
    The rise of molecular epigenetics over the last few years promises to bring the discourse about the sociality and susceptibility to environmental influences of the brain to an entirely new level. Epigenetics deals with molecular mechanisms such as gene expression, which may embed in the organism “memories” of social experiences and environmental exposures. These changes in gene expression may be transmitted across generations without changes in the DNA sequence. Epigenetics is the most advanced example of the new postgenomic and context-dependent (...)
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  • Developmental Systems Theory.Paul Griffiths & Adam Hochman - 2015 - eLS:1-7.
    Developmental systems theory (DST) is a wholeheartedly epigenetic approach to development, inheritance and evolution. The developmental system of an organism is the entire matrix of resources that are needed to reproduce the life cycle. The range of developmental resources that are properly described as being inherited, and which are subject to natural selection, is far wider than has traditionally been allowed. Evolution acts on this extended set of developmental resources. From a developmental systems perspective, development does not proceed according to (...)
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  • Who's afraid of epigenetics? Habits, instincts, and Charles Darwin’s evolutionary theory.Mauro Mandrioli & Mariagrazia Portera - 2021 - History and Philosophy of the Life Sciences 43 (1):1-23.
    Our paper aims at bringing to the fore the crucial role that habits play in Charles Darwin’s theory of evolution by means of natural selection. We have organized the paper in two steps: first, we analyse value and functions of the concept of habit in Darwin's early works, notably in his Notebooks, and compare these views to his mature understanding of the concept in the Origin of Species and later works; second, we discuss Darwin’s ideas on habits in the light (...)
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  • Converging Concepts of Evolutionary Epistemology and Cognitive Biology Within a Framework of the Extended Evolutionary Synthesis.Isabella Sarto-Jackson - 2019 - Journal for General Philosophy of Science / Zeitschrift für Allgemeine Wissenschaftstheorie 52 (2):297-312.
    Evolutionary epistemology has experienced a continuous rise over the last decades. Important new theoretical considerations and novel empirical findings have been integrated into the existing framework. In this paper, I would like to suggest three lines of research that I believe will significantly contribute to further advance EE: ontogenetic considerations, key ideas from cognitive biology, and the framework of the Extended Evolutionary Synthesis. EE, in particular the program of the evolution of epistemological mechanisms, seeks to provide a phylogenetic account of (...)
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  • Striving for clarity about the “Lamarckian” nature of CRISPR-Cas systems.Sam Woolley, Emily C. Parke, David Kelley, Anthony M. Poole & Austen R. D. Ganley - 2019 - Biology and Philosophy 34 (1):11.
    Koonin argues that CRISPR-Cas systems present the best-known case in point for Lamarckian evolution because they satisfy his proposed criteria for the specific inheritance of acquired adaptive characteristics. We see two interrelated issues with Koonin’s characterization of CRISPR-Cas systems as Lamarckian. First, at times he appears to confuse an account of the CRISPR-Cas system with an account of the mechanism it employs. We argue there is no evidence for the CRISPR-Cas system being “Lamarckian” in any sense. Second, it is unclear (...)
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  • (1 other version)Epigenesis by experience: Romantic empiricism and non-Kantian biology.Amanda Jo Goldstein - 2017 - History and Philosophy of the Life Sciences 40 (1):13.
    Reconstructions of Romantic-era life science in general, and epigenesis in particular, frequently take the Kantian logic of autotelic “self-organization” as their primary reference point. I argue in this essay that the Kantian conceptual rubric hinders our historical and theoretical understanding of epigenesis, Romantic and otherwise. Neither a neutral gloss on epigenesis, nor separable from the epistemological deflation of biological knowledge that has received intensive scrutiny in the history and philosophy of science, Kant’s heuristics of autonomous “self-organization” in the third Critique (...)
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  • Extended evolutionary psychology: the importance of transgenerational developmental plasticity.Karola Stotz - 2014 - Frontiers in Psychology 5.
    What kind mechanisms one deems central for the evolutionary process deeply influences one's understanding of the nature of organisms, including cognition. Reversely, adopting a certain approach to the nature of life and cognition and the relationship between them or between the organism and its environment should affect one's view of evolutionary theory. This paper explores this reciprocal relationship in more detail. In particular it argues that the view of living and cognitive systems, especially humans, as deeply integrated beings embedded in (...)
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  • Revisiting N.I. Vavilov’s “The Law of Homologous Series in Variation” (1922).Vidyanand Nanjundiah, R. Geeta & Valentin V. Suslov - 2022 - Biological Theory 17 (4):253-262.
    We discuss N. I. Vavilov’s 1922 landmark publication, “The Law of Homologous Series in Variation,” and highlight its salient points. Vavilov drew upon his considerable experience in the field with wild and cultivated crop plants and summarized what he noticed in the form of a law. The law stated that comparable variant forms tended to appear in different varieties of the same species, different species of the same genus, different genera of the same family, and so on. His survey of (...)
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  • Lamarckian realities: the CRISPR-Cas system and beyond.Eva Jablonka - 2019 - Biology and Philosophy 34 (1):14.
    In his target article, Koonin discusses the insights into the evolution of bacterial genomes provided by the CRISPR-Cas system. This evolved defense system is based on intrinsic processes of genome engineering which, as he argues, enable Lamarckian inheritance. In this commentary I discuss some historical and conceptual issues that pertain to Koonin’s analysis of this aspect of the CRISPR-Cas system, extending and qualifying his discussion.
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  • EvoDevo Shapes the Extended Synthesis.Gerd B. Müller - 2014 - Biological Theory 9 (2):119-121.
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  • The Generalized Theory of Evolution, January 31–February 3, 2018, Dusseldorf.Francesco Suman - 2018 - Journal for General Philosophy of Science / Zeitschrift für Allgemeine Wissenschaftstheorie 49 (1):137-140.
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  • Distributed Heredity and Development: a Heterarchical Perspective.Jana Švorcová - 2016 - Biosemiotics 9 (3):331-343.
    This review paper discusses the perspective of complex biological systems as applied to inheritance and ontogeny, focusing on the continuity of genetic, epigenetic and microbiotic inheritance. The informational processuality within this continuity can be used as to exemplify the insufficiency of hierarchical concepts in grasping the complex and integrated nature of biological processes. The argument follows Bruni and Giorgi in emphasizing that while structures and substrates are organized hierarchically, communicational processes are organized heterarchically. The essay also argues the insufficiency of (...)
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  • What’s all the fuss about? The inheritance of acquired traits is compatible with the Central Dogma.M. Polo Camacho - 2020 - History and Philosophy of the Life Sciences 42 (3):1-15.
    The Central Dogma of molecular biology, which holds that DNA makes protein and not the other way around, is as influential as it is controversial. Some believe the Dogma has outlived its usefulness, either because it fails to fully capture the ins-and-outs of protein synthesis (Griffiths and Stotz, 2013; Stotz, 2006), because it turns on a confused notion of information (Sarkar, 2004), or because it problematically assumes the unidirectional flow of information from DNA to protein (Gottlieb, 2001). This paper evaluates (...)
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  • CRISPR: a new principle of genome engineering linked to conceptual shifts in evolutionary biology.Eugene V. Koonin - 2019 - Biology and Philosophy 34 (1):9.
    The CRISPR-Cas systems of bacterial and archaeal adaptive immunity have become a household name among biologists and even the general public thanks to the unprecedented success of the new generation of genome editing tools utilizing Cas proteins. However, the fundamental biological features of CRISPR-Cas are of no lesser interest and have major impacts on our understanding of the evolution of antivirus defense, host-parasite coevolution, self versus non-self discrimination and mechanisms of adaptation. CRISPR-Cas systems present the best known case in point (...)
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  • Three Modes of Evolution by Natural Selection and Drift: A New or an Extended Evolutionary Synthesis?Marion Blute - 2017 - Biological Theory 12 (2):67-71.
    According to sources both in print and at a recent meeting, evolutionary theory is currently undergoing change which some would characterize as a New Synthesis, and others as an Extended Synthesis. This article argues that the important changes involve recognizing that there are three means by which evolutionary change can be initiated and three corresponding modes of evolutionary drift. It compares the three and goes on to discuss the scale of innovation and extended or inclusive and Lamarckian inheritance. It concludes (...)
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  • Abstraction, dissociation, and mental labor: Paul Szende’s social epistemology between physiology and social theory.Monika Wulz - 2015 - Studies in East European Thought 67 (1-2):13-30.
    In this paper I focus on the Hungarian intellectual and politician Paul Szende’s sociologically oriented epistemology. I trace the influences of physiology, psychology, economy, evolutionary theory of his day on his sociological theory of abstractive knowledge, and discuss the close connection between physiological, social, and economic aspects in the early sociology of knowledge. My discussion continues with an examination of Szende’s differentiation between two economic effects within social epistemology: on the one hand the ‘economy of thought’ in the tradition of (...)
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  • Between Social and Biological Heredity: Cope and Baldwin on Evolution, Inheritance, and Mind.David Ceccarelli - 2019 - Journal of the History of Biology 52 (1):161-194.
    In the years of the post-Darwinian debate, many American naturalists invoked the name of Lamarck to signal their belief in a purposive and anti-Darwinian view of evolution. Yet Weismann’s theory of germ-plasm continuity undermined the shared tenet of the neo-Lamarckian theories as well as the idea of the interchangeability between biological and social heredity. Edward Drinker Cope, the leader of the so-called “American School,” defended his neo-Lamarckian philosophy against every attempt to redefine the relationship between behavior, development, and heredity beyond (...)
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  • Engaging the Adaptive Subject: Learning Evolution Beyond the Cell Walls.Ramsey Affifi - 2020 - Biological Theory 15 (3):121-135.
    According to the modern synthesis, evolution is the gradual change of gene frequencies in a population. The MS is closely allied to adaptationist explanations of phenotypes, where organismic form and behavior is treated as previously selected for and owes its genesis to some remote past. However, some new theories of evolution broadly aligned with the extended evolutionary synthesis, in particular developmental plasticity theory and niche construction theory, foreground the fact that evolution is sometimes much more rapid than previously imagined, and (...)
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  • Freudarwin: Evolutionary Thinking as a Root of Psychoanalysis.Geoffrey Marcaggi & Fabian Guénolé - 2018 - Frontiers in Psychology 9:348399.
    This essay synthesizes the place of biological evolutionism in the early history of psychoanalysis, and shows the implicit significance of German Darwinism in Sigmund Freud’s whole psychoanalytical works. In particular, Freud, together with Sándor Ferenczi (1873–1933), applied to mental disorders hypotheses inspired by August Pauly’s (1850–1914) psychological Lamarckism and Ernst Heckel (1834–1919) theory of recapitulation. Both of these theories rested upon the principle of inheritance of acquired characteristics, and were disproved by biological discoveries during the interwar period. However, despite these (...)
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  • De humanos y líquenes.Davide Vecchi - 2014 - Scientiae Studia 12 (2):331-357.
    La versión estadística del concepto de naturaleza humana sigue siendo un concepto central en muchas ramas de las ciencias humanas. La clave del concepto es que existe un núcleo de fenotipos específicos que caracteriza a las especies biológicas, incluyendo la nuestra. Llamo a esta perspectiva esencialismo estadístico. Voy a sugerir que la tipicidad y la uniformidad fenotípica se consideran supuestos legítimos en muchas ciencias humanas, ya que el desarrollo biológico se interpreta como un proceso inherentemente conservador que utiliza sólo recursos (...)
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  • Assimiliating an Associative Trait: from Eco-Physiology to Epigenetics.Andres Kurismaa - 2018 - Biosemiotics 11 (2):199-229.
    The possible evolutionary significance of epigenetic memory and codes is a key problem for extended evolutionary synthesis and biosemiotics. In this paper, some less known original works are reviewed which highlight theoretical parallels between current evolutionary epigenetics, on the one hand, and its predecessors in the eco-physiology of higher nervous activity, on the other. Recently, these areas have begun to converge, with first evidence now indicating the possibility of transgenerational epigenetic inheritance of conditional associations in the mammalian nervous system, and (...)
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  • Beyond Generalized Darwinism. II. More Things in Heaven and Earth.Werner Callebaut - 2011 - Biological Theory 6 (4):351-365.
    This is the second of two articles in which I reflect on “generalized Darwinism” as currently discussed in evolutionary economics. In the companion article (Callebaut, Biol Theory 6. doi: 10.1007/s13752-013-0086-2, 2011, this issue) I approached evolutionary economics from the naturalistic perspectives of evolutionary epistemology and the philosophy of biology, contrasted evolutionary economists’ cautious generalizations of Darwinism with “imperialistic” proposals to unify the behavioral sciences, and discussed the continued resistance to biological ideas in the social sciences. Here I assess Generalized Darwinism (...)
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