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Genidentity and Biological Processes

In Daniel J. Nicholson & John Dupré (eds.), Everything Flows: Towards a Processual Philosophy of Biology. Oxford, United Kingdom: Oxford University Press (2018)

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  1. Ordinary Objects.Amie L. Thomasson (ed.) - 2007 - New York: Oxford University Press.
    Arguments that ordinary inanimate objects such as tables and chairs, sticks and stones, simply do not exist have become increasingly common and increasingly prominent. Some are based on demands for parsimony or for a non-arbitrary answer to the special composition question; others arise from prohibitions against causal redundancy, ontological vagueness, or co-location; and others still come from worries that a common sense ontology would be a rival to a scientific one. Until now, little has been done to address these arguments (...)
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  • (4 other versions)Creative evolution.Henri Bergson - 1937 - New York: Palgrave-Macmillan. Edited by Keith Ansell-Pearson, Michael Kolkman & Michael Vaughan.
    Henri Bergson (1859-1941) is one of the truly great philosophers of the modernist period, and there is currently a major renaissance of interest in his unduly neglected texts and ideas amongst philosophers, literary theorists, and social theorists. Creative Evolution (1907) is the text that made Bergson world-famous in his own lifetime; in it Bergson responds to the challenge presented to our habits of thought by modern evolutionary theory, and attempts to show that the theory of knowledge must have its basis (...)
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  • Every thing must go: metaphysics naturalized.James Ladyman & Don Ross - 2007 - New York: Oxford University Press. Edited by Don Ross, David Spurrett & John G. Collier.
    Every Thing Must Go aruges that the only kind of metaphysics that can contribute to objective knowledge is one based specifically on contemporary science as it ...
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  • The intelligibility of nature: how science makes sense of the world.Peter Dear - 2006 - Chicago: University of Chicago Press.
    Throughout the history of the Western world, science has possessed an extraordinary amount of authority and prestige. And while its pedestal has been jostled by numerous evolutions and revolutions, science has always managed to maintain its stronghold as the knowing enterprise that explains how the natural world works: we treat such legendary scientists as Galileo, Newton, Darwin, and Einstein with admiration and reverence because they offer profound and sustaining insight into the meaning of the universe. In The Intelligibility of Nature (...)
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  • Metaphors we live by.George Lakoff & Mark Johnson - 1980 - Chicago: University of Chicago Press. Edited by Mark Johnson.
    The now-classic Metaphors We Live By changed our understanding of metaphor and its role in language and the mind. Metaphor, the authors explain, is a fundamental mechanism of mind, one that allows us to use what we know about our physical and social experience to provide understanding of countless other subjects. Because such metaphors structure our most basic understandings of our experience, they are "metaphors we live by"--metaphors that can shape our perceptions and actions without our ever noticing them. In (...)
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  • (2 other versions)The phenomenon of life: toward a philosophical biology.Hans Jonas - 1966 - Evanston, Ill.: Northwestern University Press.
    A classic of phenomenology and existentialism and arguably Jonas's greatest work, The Phenomenon of Life sets forth a systematic and comprehensive philosophy -- ...
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  • How things persist.Katherine Hawley - 2001 - New York: Oxford University Press.
    Katherine Hawley explores and compares three theories of persistence -- endurance, perdurance, and stage theories - investigating the ways in which they attempt to account for the world around us. Having provided valuable clarification of its two main rivals, she concludes by advocating stage theory.
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  • The triple helix: gene, organism, and environment.Richard C. Lewontin - 2000 - Cambridge: Harvard University Press. Edited by Richard C. Lewontin.
    One of our most brilliant evolutionary biologists, Richard Lewontin has also been a leading critic of those--scientists and non-scientists alike--who would misuse the science to which he has contributed so much. In The Triple Helix, Lewontin the scientist and Lewontin the critic come together to provide a concise, accessible account of what his work has taught him about biology and about its relevance to human affairs. In the process, he exposes some of the common and troubling misconceptions that misdirect and (...)
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  • (1 other version)The direction of time.Hans Reichenbach - 1956 - Mineola, N.Y.: Dover Publications. Edited by Maria Reichenbach.
    The final work of a distinguished physicist, this remarkable volume examines the emotive significance of time, the time order of mechanics, the time direction of thermodynamics and microstatistics, the time direction of macrostatistics, and the time of quantum physics. Coherent discussions include accounts of analytic methods of scientific philosophy in the investigation of probability, quantum mechanics, the theory of relativity, and causality. "[Reichenbach’s] best by a good deal."—Physics Today. 1971 ed.
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  • (1 other version)Explaining the brain: mechanisms and the mosaic unity of neuroscience.Carl F. Craver - 2007 - New York : Oxford University Press,: Oxford University Press, Clarendon Press.
    Carl Craver investigates what we are doing when we sue neuroscience to explain what's going on in the brain.
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  • The philosophy of artificial life.Margaret A. Boden (ed.) - 1996 - New York: Oxford University Press.
    This new volume in the acclaimed Oxford Readings in Philosophy sereis offers a selection of the most important philosophical work being done in the new and fast-growing interdisciplinary area of artificial life. Artificial life research seeks to synthesize the characteristics of life by artificial means, particularly employing computer technology. The essays here explore such fascinating themes as the nature of life, the relation between life and mind, and the limits of technology.
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  • The nature of selection: evolutionary theory in philosophical focus.Elliott Sober - 1984 - Chicago: University of Chicago Press.
    The Nature of Selection is a straightforward, self-contained introduction to philosophical and biological problems in evolutionary theory. It presents a powerful analysis of the evolutionary concepts of natural selection, fitness, and adaptation and clarifies controversial issues concerning altruism, group selection, and the idea that organisms are survival machines built for the good of the genes that inhabit them. "Sober's is the answering philosophical voice, the voice of a first-rate philosopher and a knowledgeable student of contemporary evolutionary theory. His book merits (...)
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  • Foundations for a metaphysics of pure process: The Carus lectures of Wilfrid Sellars.Wilfrid Sellars - 1981 - The Monist 64 (1):3-90.
    1. The lever in question is, of course, that with which, provided that an appropriate fulcrum could be found, Archimedes could move the world. In the analogy I have in mind, the fulcrum is the given, by virtue of which the mind gets leverage on the world of knowledge.
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  • Resurrecting biological essentialism.Michael Devitt - 2008 - Philosophy of Science 75 (3):344-382.
    The article defends the doctrine that Linnaean taxa, including species, have essences that are, at least partly, underlying intrinsic, mostly genetic, properties. The consensus among philosophers of biology is that such essentialism is deeply wrong, indeed incompatible with Darwinism. I argue that biological generalizations about the morphology, physiology, and behavior of species require structural explanations that must advert to these essential properties. The objection that, according to current “species concepts,” species are relational is rejected. These concepts are primarily concerned with (...)
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  • The interactivist model.Mark H. Bickhard - 2009 - Synthese 166 (3):547 - 591.
    A shift from a metaphysical framework of substance to one of process enables an integrated account of the emergence of normative phenomena. I show how substance assumptions block genuine ontological emergence, especially the emergence of normativity, and how a process framework permits a thermodynamic-based account of normative emergence. The focus is on two foundational forms of normativity, that of normative function and of representation as emergent in a particular kind of function. This process model of representation, called interactivism, compels changes (...)
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  • SNAP and SPAN: Towards dynamic spatial ontology.Pierre Grenon & Barry Smith - 2004 - Spatial Cognition and Computation 4 (1):69–103.
    We propose a modular ontology of the dynamic features of reality. This amounts, on the one hand, to a purely spatial ontology supporting snapshot views of the world at successive instants of time and, on the other hand, to a purely spatiotemporal ontology of change and process. We argue that dynamic spatial ontology must combine these two distinct types of inventory of the entities and relationships in reality, and we provide characterizations of spatiotemporal reasoning in the light of the interconnections (...)
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  • Self-organization, Individuation and Identity.John Collier - 2004 - Revue Internationale de Philosophie 2:151-172.
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  • The ingredients for a postgenomic synthesis of nature and nurture.Karola Stotz - 2008 - Philosophical Psychology 21 (3):359 – 381.
    This paper serves as an introduction to the special issue on “Reconciling Nature and Nurture in Behavior and Cognition Research” and sets its agenda to resolve the 'interactionist' dichotomy of nature as the genetic, and stable, factors of development, and nurture as the environmental, and plastic influences. In contrast to this received view it promotes the idea that all traits, no matter how developmentally fixed or universal they seem, contingently develop out of a single-cell state through the interaction of a (...)
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  • Natural selection.Robert Brandon - 2008 - Stanford Encyclopedia of Philosophy.
    Darwin's theory of evolution by natural selection provided the first, and only, causal-mechanistic account of the existence of adaptations in nature. As such, it provided the first, and only, scientific alternative to the “argument from design”. That alone would account for its philosophical significance. But the theory also raises other philosophical questions not encountered in the study of the theories of physics. Unfortunately the concept of natural selection is intimately intertwined with the other basic concepts of evolutionary theory—such as the (...)
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  • Darwinian metaphysics: Species and the question of essentialism.Samir Okasha - 2002 - Synthese 131 (2):191-213.
    Biologists and philosophers of biology typically regard essentialism about speciesas incompatible with modern Darwinian theory. Analytic metaphysicians such asKripke, Putnam and Wiggins, on the other hand, believe that their essentialist thesesare applicable to biological kinds. I explore this tension. I show that standard anti-essentialist considerations only show that species do not have intrinsic essential properties. I argue that while Putnam and Kripke do make assumptions that contradict received biological opinion, their model of natural kinds, suitably modified, is partially applicable to (...)
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  • How molecular is molecular developmental biology? A reply to Alex Rosenberg's reductionism redux: Computing the embryo. [REVIEW]Manfred D. Laubichler & Günter P. Wagner - 2001 - Biology and Philosophy 16 (1):53-68.
    This paper argues in defense of theanti-reductionist consensus in the philosophy ofbiology. More specifically, it takes issues with AlexRosenberg's recent challenge of this position. Weargue that the results of modern developmentalgenetics rather than eliminating the need forfunctional kinds in explanations of developmentactually reinforce their importance.
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  • Causation and the flow of energy.David Fair - 1979 - Erkenntnis 14 (3):219 - 250.
    Causation has traditionally been analyzed either as a relation of nomic dependence or as a relation of counterfactual dependence. I argue for a third program, a physicalistic reduction of the causal relation to one of energy-momentum transference in the technical sense of physics. This physicalistic analysis is argued to have the virtues of easily handling the standard counterexamples to the nomic and counterfactual analyses, offering a plausible epistemology for our knowledge of causes, and elucidating the nature of the relation between (...)
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  • Normative requirements.John Broome - 1999 - Ratio 12 (4):398–419.
    Normative requirements are often overlooked, but they are central features of the normative world. Rationality is often thought to consist in acting for reasons, but following normative requirements is also a major part of rationality. In particular, correct reasoning – both theoretical and practical – is governed by normative requirements rather than by reasons. This article explains the nature of normative requirements, and gives examples of their importance. It also describes mistakes that philosophers have made as a result of confusing (...)
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  • Verbs and times.Zeno Vendler - 1957 - Philosophical Review 66 (2):143-160.
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  • Evolution, population thinking, and essentialism.Elliott Sober - 1980 - Philosophy of Science 47 (3):350-383.
    Ernst Mayr has argued that Darwinian theory discredited essentialist modes of thought and replaced them with what he has called "population thinking". In this paper, I characterize essentialism as embodying a certain conception of how variation in nature is to be explained, and show how this conception was undermined by evolutionary theory. The Darwinian doctrine of evolutionary gradualism makes it impossible to say exactly where one species ends and another begins; such line-drawing problems are often taken to be the decisive (...)
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  • Four Dimensionalism.Theodore Sider - 1997 - Philosophical Review 106 (2):197-231.
    Persistence through time is like extension through space. A road has spatial parts in the subregions of the region of space it occupies; likewise, an object that exists in time has temporal parts in the various subregions of the total region of time it occupies. This view — known variously as four dimensionalism, the doctrine of temporal parts, and the theory that objects “perdure” — is opposed to “three dimensionalism”, the doctrine that things “endure”, or are “wholly present”.1 I will (...)
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  • All the World’s a Stage.Theodore Sider - 1996 - Australasian Journal of Philosophy 74 (3):433 – 453.
    Some philosophers believe that everyday objects are 4-dimensional spacetime worms, that a person (for example) persists through time by having temporal parts, or stages, at each moment of her existence. None of these stages is identical to the person herself; rather, she is the aggregate of all her temporal parts.1 Others accept “three dimensionalism”, rejecting stages in favor of the notion that persons “endure”, or are “wholly present” throughout their lives.2 I aim to defend an apparently radical third view: not (...)
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  • Size doesn’t matter: towards a more inclusive philosophy of biology. [REVIEW]Maureen A. O’Malley & John Dupré - 2007 - Biology and Philosophy 22 (2):155-191.
    Philosophers of biology, along with everyone else, generally perceive life to fall into two broad categories, the microbes and macrobes, and then pay most of their attention to the latter. ‘Macrobe’ is the word we propose for larger life forms, and we use it as part of an argument for microbial equality. We suggest that taking more notice of microbes – the dominant life form on the planet, both now and throughout evolutionary history – will transform some of the philosophy (...)
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  • Events, processes, and states.Alexander P. D. Mourelatos - 1978 - Linguistics and Philosophy 2 (3):415 - 434.
    The familiar Vendler-Kenny scheme of verb-types, viz., performances (further differentiated by Vedler into accomplishments and achievements), activities, and states, is too narrow in two important respects. First, it is narrow linguistically. It fails to take into account the phenomenon of verb aspect. The trichotomy is not one of verbs as lexical types but of predications. Second, the trichotomy is narrow ontologically. It is a specification in the context of human agency of the more fundamental, topic-neutral trichotomy, event-process-state.The central component in (...)
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  • There are no criteria of identity over time.Trenton Merricks - 1998 - Noûs 32 (1):106-124.
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  • A matter of individuality.David L. Hull - 1978 - Philosophy of Science 45 (3):335-360.
    Biological species have been treated traditionally as spatiotemporally unrestricted classes. If they are to perform the function which they do in the evolutionary process, they must be spatiotemporally localized individuals, historical entities. Reinterpreting biological species as historical entities solves several important anomalies in biology, in philosophy of biology, and within philosophy itself. It also has important implications for any attempt to present an "evolutionary" analysis of science and for sciences such as anthropology which are devoted to the study of single (...)
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  • Development, culture, and the units of inheritance.James Griesemer - 2000 - Philosophy of Science 67 (3):368.
    Developmental systems theory (DST) expands the unit of replication from genes to whole systems of developmental resources, which DST interprets in terms of cycling developmental processes. Expansion seems required by DST's argument against privileging genes in evolutionary and developmental explanations of organic traits. DST and the expanded replicator brook no distinction between biological and cultural evolution. However, by endorsing a single expanded unit of inheritance and leaving the classical molecular notion of gene intact, DST achieves only a nominal reunification of (...)
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  • Cladistic classification and functional explanation.P. E. Griffiths - 1994 - Philosophy of Science 61 (2):206-227.
    I adopt a cladistic view of species, and explore the possibility that there exists an equally valuable cladistic view of organismic traits. This suggestion seems to run counter to the stress on functional views of biological traits in recent work in philosophy and psychology. I show how the tension between these two views can be defused with a multilevel view of biological explanation. Despite the attractions of this compromise, I conclude that we must reject it, and adopt an essentially cladistic (...)
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  • Eliminative pluralism.Marc Ereshefsky - 1992 - Philosophy of Science 59 (4):671-690.
    This paper takes up the cause of species pluralism. An argument for species pluralism is provided and standard monist objections to pluralism are answered. A new form of species pluralism is developed and shown to be an improvement over previous forms. This paper also offers a general foundation on which to base a pluralistic approach to biological classification.
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  • Autopoiesis, adaptivity, teleology, agency.Ezequiel A. Di Paolo - 2005 - Phenomenology and the Cognitive Sciences 4 (4):429-452.
    A proposal for the biological grounding of intrinsic teleology and sense-making through the theory of autopoiesis is critically evaluated. Autopoiesis provides a systemic language for speaking about intrinsic teleology but its original formulation needs to be elaborated further in order to explain sense-making. This is done by introducing adaptivity, a many-layered property that allows organisms to regulate themselves with respect to their conditions of viability. Adaptivity leads to more articulated concepts of behaviour, agency, sense-construction, health, and temporality than those given (...)
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  • Where's the good in teleology?Mark Bedau - 1992 - Philosophy and Phenomenological Research 52 (4):781-806.
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  • Mind in Life: Biology, Phenomenology, and the Sciences of Mind.Evan Thompson - 2007 - Cambridge, Mass.: Harvard University Press.
    The question has long confounded philosophers and scientists, and it is this so-called explanatory gap between biological life and consciousness that Evan ...
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  • The biological foundations of cognitive science.Mark H. Bickhard - manuscript
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  • When mechanistic models explain.Carl F. Craver - 2006 - Synthese 153 (3):355-376.
    Not all models are explanatory. Some models are data summaries. Some models sketch explanations but leave crucial details unspecified or hidden behind filler terms. Some models are used to conjecture a how-possibly explanation without regard to whether it is a how-actually explanation. I use the Hodgkin and Huxley model of the action potential to illustrate these ways that models can be useful without explaining. I then use the subsequent development of the explanation of the action potential to show what is (...)
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  • Thinking about mechanisms.Peter Machamer, Lindley Darden & Carl F. Craver - 2000 - Philosophy of Science 67 (1):1-25.
    The concept of mechanism is analyzed in terms of entities and activities, organized such that they are productive of regular changes. Examples show how mechanisms work in neurobiology and molecular biology. Thinking in terms of mechanisms provides a new framework for addressing many traditional philosophical issues: causality, laws, explanation, reduction, and scientific change.
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  • The Ecological Approach to Visual Perception: Classic Edition.James J. Gibson - 1979 - Houghton Mifflin.
    This is a book about how we see: the environment around us (its surfaces, their layout, and their colors and textures); where we are in the environment; whether or not we are moving and, if we are, where we are going; what things are good for; how to do things (to thread a needle or drive an automobile); or why things look as they do.The basic assumption is that vision depends on the eye which is connected to the brain. The (...)
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  • The Embodied Mind: Cognitive Science and Human Experience.Francisco J. Varela, Evan Thompson & Eleanor Rosch - 1991 - MIT Press.
    The Embodied Mind provides a unique, sophisticated treatment of the spontaneous and reflective dimension of human experience.
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  • The Human Animal: Personal Identity Without Psychology.Eric Todd Olson - 1997 - New York, US: Oxford University Press.
    Most philosophers writing about personal identity in recent years claim that what it takes for us to persist through time is a matter of psychology. In this groundbreaking new book, Eric Olson argues that such approaches face daunting problems, and he defends in their place a radically non-psychological account of personal identity. He defines human beings as biological organisms, and claims that no psychological relation is either sufficient or necessary for an organism to persist. Olson rejects several famous thought-experiments dealing (...)
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  • Physicalism, Emergence and Downward Causation.Richard J. Campbell & Mark H. Bickhard - 2011 - Axiomathes 21 (1):33-56.
    The development of a defensible and fecund notion of emergence has been dogged by a number of threshold issues neatly highlighted in a recent paper by Jaegwon Kim. We argue that physicalist assumptions confuse and vitiate the whole project. In particular, his contention that emergence entails supervenience is contradicted by his own argument that the ‘microstructure’ of an object belongs to the whole object, not to its constituents. And his argument against the possibility of downward causation is question-begging and makes (...)
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  • Emergence.Mark H. Bickhard - 2000 - In P. B. Andersen, Claus Emmeche, N. O. Finnemann & P. V. Christiansen (eds.), Downward Causation. Aarhus, Denmark: University of Aarhus Press. pp. 322-348.
    * This paper was to have been written jointly with Don Campbell. His tragic death on May 6, 1996, occurred before we had been able to do much planning for the paper. As a result, this is undoubtedly a very different paper than if Don and I had written it together, and, undoubtedly, not as good a paper. Nevertheless, I believe it maintains at least the spirit of what we had discussed. Clearly, all errors are mine alone.
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  • Process and emergence: Normative function and representation.Mark H. Bickhard - 2004 - Axiomathes - An International Journal in Ontology and Cognitive Systems 14:135-169.
    Emergence seems necessary for any naturalistic account of the world — none of our familiar world existed at the time of the Big Bang, and it does now — and normative emergence is necessary for any naturalistic account of biology and mind — mental phenomena, such as representation, learning, rationality, and so on, are normative. But Jaegwon Kim’s argument appears to render causally efficacious emergence impossible, and Hume’s argument appears to render normative emergence impossible, and, in its general form, it (...)
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  • Physicalism, or Something Near Enough.Jaegwon Kim - 2005 - Princeton University Press.
    "This is a fine volume that clarifies, defends, and moves beyond the views that Kim presented in Mind in a Physical World.
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  • Sensational properties: Theses to accept and theses to reject.Christopher Peacocke - 2008 - Revue Internationale de Philosophie 62 (1):7-24.
    The subjective properties of an experience are those which specify what having the experience is like for its subject. The sensational properties of an experience are those of its subjective properties that it does not possess in virtue of features of the way the experience represents the world as being (its representational content). Perhaps no topic in the philosophy of mind has been more vigorously debated in the past quarter-century than whether there are any sensational properties, so conceived. The existence (...)
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  • A sensorimotor account of vision and visual consciousness.J. Kevin O’Regan & Alva Noë - 2001 - Behavioral and Brain Sciences 24 (5):883-917.
    Many current neurophysiological, psychophysical, and psychological approaches to vision rest on the idea that when we see, the brain produces an internal representation of the world. The activation of this internal representation is assumed to give rise to the experience of seeing. The problem with this kind of approach is that it leaves unexplained how the existence of such a detailed internal representation might produce visual consciousness. An alternative proposal is made here. We propose that seeing is a way of (...)
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  • Action in Perception.Alva Noë - 2004 - MIT Press.
    "Perception is not something that happens to us, or in us," writes Alva Noe. "It is something we do." In Action in Perception, Noe argues that perception and perceptual consciousness depend on capacities for action and thought — that ...
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