Metaphors play a crucial role in the understanding of science. Since antiquity, metaphors have been used in technical texts to describe structures unknown or unnamed; besides establishing a terminology of science, metaphors are also important for the expression of concepts. However, a concise terminology to classify metaphors in the language of science has not been established yet. But in the context of studying the history of a science and its concepts, a precise typology of metaphors can be helpful. Metaphors have (...) a lot in common with models in science, as has been observed already. In this paper, therefore, I suggest a typology of metaphor in ancient science to fill this terminological gap by using concepts applied to the classification of models in science, as coined by Rom Harré. I propose to differentiate between homeoconceptual metaphors and paraconceptual metaphors. Furthermore, functional and structural aspects of metaphors in ancient science are taken into account. Case studies from ancient texts displaying metaphors in ancient science are presented and classified following the outlined typology of metaphors. (shrink)

Three metascientific concepts that have been object of philosophical analysis are the concepts oflaw, model and theory. The aim ofthis article is to present the explication of these concepts, and of their relationships, made within the framework of Sneedean or Metatheoretical Structuralism (Balzer et al. 1987), and of their application to a case from the realm of biology: Population Dynamics. The analysis carried out will make it possible to support, contrary to what some philosophers of science in general and of (...) biology in particular hold, the following claims: a) there are "laws" in biological sciences, b) many of the heterogeneous and different "models" of biology can be accommodated under some "theory", and c) this is exactly what confers great unifying power to biological theories. (shrink)

In this chapter we examine the relation between mechanisms and laws/counterfactuals by revisiting the main notions of mechanism found in the literature. We distinguish between two different conceptions of ‘mechanism’: mechanisms-of underlie or constitute a causal process; mechanisms-for are complex systems that function so as to produce a certain behavior. According to some mechanists, a mechanism fulfills both of these roles simultaneously. The main argument of the chapter is that there is an asymmetrical dependence between both kinds of mechanisms and (...) laws/counterfactuals: while some laws and counterfactuals must be taken as primitive (non-mechanistic) facts of the world, all mechanisms depend on laws/counterfactuals. (shrink)

List of Illustrations Introduction 1 The Didactic and the Elegant: Some Thoughts on Scientific and Technological Illustrations in the Middle Ages and Renaissance 3 2 Temples of the Body and Temples of the Cosmos: Vision and Visualization in the Vesalian and Copernican Revolutions 40 3 Descartes’s Scientific Illustrations and ’la grande mecanique de la nature’ 86 4 Illustrating Chemistry 135 5 Representations of the Natural System in the Nineteenth Century 164 6 Visual Representation in Archaeology: Depicting the Missing-Link in Human (...) Origins 184 7 Towards an Epistemology of Scientific Illustration 215 8 Illustration and Inference 250 9 Visual Models and Scientific Judgment 269 10 Are Pictures Really Necessary? The Case of Sewall Wright’s ’Adaptive Landscapes’ 303 Bibliography 339 Notes on Contributors 373 Index 377. (shrink)

The picture of synthetic biology as a kind of engineering science has largely created the public understanding of this novel field, covering both its promises and risks. In this paper, we will argue that the actual situation is more nuanced and complex. Synthetic biology is a highly interdisciplinary field of research located at the interface of physics, chemistry, biology, and computational science. All of these fields provide concepts, metaphors, mathematical tools, and models, which are typically utilized by synthetic biologists by (...) drawing analogies between the different fields of inquiry. We will study analogical reasoning in synthetic biology through the emergence of the functional meaning of noise, which marks an important shift in how engineering concepts are employed in this field. The notion of noise serves also to highlight the differences between the two branches of synthetic biology: the basic science-oriented branch and the engineering-oriented branch, which differ from each other in the way they draw analogies to various other fields of study. Moreover, we show that fixing the mapping between a source domain and the target domain seems not to be the goal of analogical reasoning in actual scientific practice. (shrink)

Der Begriff ‘Modell’ leitet sich vom Lateinischen ‘modulus’ (das Maß) ab, im Italienischen existiert seit dem 16. Jh. ‘modello’ und R. Descartes verwendet im 17. Jh. ‘modèlle’. Während der Begriff in Architektur und Kunst schon seit der Renaissance gängig ist, wird er in den Naturwissenschaften erst im 19. Jh. verwendet.1 Dort greifen wissenschaftliche Modelle die für eine gegebene Problemstellung als wesentlich erachteten Charakteristika (Eigenschaften, Beziehungen, etc.) eines Untersuchungsgegenstandes heraus und machen diesen so einem Verständnis bzw. einer weiterführenden Untersuchung zugänglich. Es (...) ist üblich, zwischen Skalenmodellen, Analogmodellen und theoretischen Modellen zu unterscheiden. (shrink)

My philosophical intuitions are those of a scientific realist. In addition to being realist in its philosophical outlook, my philosophy of economics also aspires to be realistic in the sense of being descriptively adequate, or at least normatively non-utopian, about economics as a scientific discipline. The special challenge my philosophy of economics must meet is to provide a scientific realist account that is realistic of a discipline that deals with a complex subject matter and operates with highly unrealistic models. Unrealisticness (...) in economic models must not constitute an obstacle to realism about those models. What follows is a selective and somewhat abstract summary of my thinking about economics, outlined from two perspectives: first historical and autobiographical, then systematic and comparative. The first angle helps understand motives and trajectories of ideas against their backgrounds in intellectual history. My story turns out to have both unique and generalizable aspects. The second approach outlines some of the key concepts and arguments as well as their interrelations in my philosophy of economics, with occasional comparisons to other views. More space will be devoted to this second perspective than to the first. (shrink)

In this paper, we argue for a novel three-dimensionalist solution to the problem of persistence, i.e. cross-temporal identity. We restrict the discussion of persistence to simple substances, which do not have other substances as their parts. The account of simple substances employed in the paper is a trope-nominalist strong nuclear theory, which develops Peter Simons' trope nominalism. Regarding the distinction between three dimensionalism and four dimensionalism, we follow Michael Della Rocca's formulation, in which 3D explains persistence in virtue of same (...) entities and 4D in virtue of distinct entities. SNT is a 3D'ist position because it accounts for the persistence of simple substances in virtue of diachronically identical ‘nuclear’ tropes. The nuclear tropes of a simple substance are necessary for it and mutually rigidly dependent but distinct. SNT explains qualitative change by tropes that are contingent to a simple substance. We show that it avoids the standard problems of 3D: temporal relativization of ontic predication, Bradley's regress and coincidence, fission and fusion cases. The temporal relativization is avoided because of the analysis of temporary parts that SNT gives in terms of temporal sub-location, which is atemporal part–whole relation. (shrink)

Biologically motivated computing seeks to transfer ideas from the biosciences to computer science. In seeking to make transfers it is helpful to be able to appreciate the metaphors which people use. This is because metaphors provide the context through which analogies and similes are made and by which many scientific models are constructed. As such, it is important for any rapidly evolving domain of knowledge to have developments accounted for in these terms. This paper seeks to provide one overview of (...) the process of modelling and shows how it can be used to account for a variety of biologically motivated computational models. Certain key ideas are identified in the subsequent analysis of biological sources, notably, systemic metaphors. Three important aspects of biological thinking are then considered in the light of computer science applications: biological organization, the cell, and models of evolution. The analysis throughout the paper is descriptive rather than formalized so that a large variety of potential applications may be considered. (shrink)

In this paper I expound an argument which seems to establish that probabilism and special relativity are incompatible. I examine the argument critically, and consider its implications for interpretative problems of quantum theory, and for theoretical physics as a whole.

I offer a defense of ana-logical accounts of scientific models by meeting certain logical objections to the legitimacy of analogical reasoning. I examine an argument by Joseph Agassi that purports to show that all putative cases of analogical inference succumb to the following dilemma: either (1) the reasoning remains hopelessly vague and thus establishes no conclusion, or (2) can be analyzed into a logically preferable non-analogical form. In rebuttal, I offer a class of scientific models for which (a) there is (...) no satisfactory non-analogical analysis, and (b) we can gain sufficient clarity for the legitimacy of the inference to be assessed. This result constitutes an existence proof for a class of analogical models that escape Agassi’s dilemma. (shrink)

In order to tesl for critical thinking dispositions, the presence of the requisite critical thinking abilities must first be established. Otherwise, it is always a plausible counterexplanation of failure to use certain abilities that they were not possessed. If a person spontaneously uses some ability on a task, then it is often legitimate to conclude that the person has both the ability and the disposition to use it. However, if the person does not use the ability spontaneously, the conclusion is (...) ambiguous. The person might not have the ability, or might have the ability but not the disposition to use it, or not the disposition to use it in the specific circumstances of the presented task. This paper proposes methods of critical thinking testing designed to deal with each of these possibilities. (shrink)

The doctrine of the arbitrary assertion is a key part of Objectivist epistemology as elaborated by Leonard Peikoff. For Peikoff, assertions unsupported by evidence are neither true nor false; they have no context or place in the hierarchy of conceptual knowledge; they are meaningless and paralyze rational cognition; their production is proof of irrationality. A thorough examination of the doctrine reveals worrisomely unclear standards of evidence and a jumble of contradictory claims about which assertions are arbitrary, when they are arbitrary, (...) and what ought to be done about them when they are. A wholesale rejection of the doctrine is recommended. (shrink)

: This paper contains the analysis of nine interviews with UK scientists on the topic of scientific models. Scientific models are an important, very controversially discussed topic in philosophy of science. A reasonable expectation is that philosophical conceptions of models ought to be in agreement with scientific practice. Questioning practicing scientists on their use of and views on models provides material against which philosophical positions can be measured.

This chapter contains sections titled: Highlights of Past Literature Current Work Future Work.

There is an assumption common in the philosophy of mind literature that kinds in our sciences—or causal kinds, at least—are individuated by the causal powers that objects have in virtue of the properties they instantiate. While this assumption might not be problematic by itself, some authors take the assumption to mean that falling under a kind and instantiating a property amount to the same thing. I call this assumption the “Property-Kind Individuation Principle”. A problem with this principle arises because there (...) are cases where we can sort objects by their possession of common causal powers, and yet those objects do not intuitively form a causal kind. In this short note, I discuss why the Property-Kind Individuation Principle is thus not a warranted metaphysical assumption. (shrink)

It is common for us to see models as exemplars of things that exist. Models, instead, are merely Peircean indexes, in that they only point to their objects, objects which may in themselves not exist. This is to say that these examples may only exist as thoughts that point to other thoughts or even ideas that point to objects that may not exist because they are paradoxical.

First published in 2002. Routledge is an imprint of Taylor & Francis, an informa company.

Reed argues that the architectures of knowledge representation in Object -Oriented Programming and in Ayn Rand's Objectivist epistemology are exactly isomorphic, and were first proposed at about the same time. These similarities did not result from mutual influence, but from the need to represent knowledge, in both systems, in accordance with the same facts of reality. Thanks to the isomorphism of knowledge representation in the two systems, logical techniques developed in the context of OOP, such as scope-tracking and inheritance, are (...) directly usable and useful in objective logic based on Objectivist epistemology. (shrink)

This article focuses on emergence in social systems. The author begins by proposing a new tool to explore the mechanisms of social emergence: multi agent–based computer simulation. He then draws on philosophy of mind to develop an account of social emergence that raises potential problems for the methodological individualism of both social mechanism and of multi agent simulation. He then draws on various complexity concepts to propose a set of criteria whereby one can determine whether a given social mechanism generates (...) emergent properties, in the sense that their explanation cannot be reduced to a mechanistic account of individuals and their interactions. This combined account helps to resolve the competing claims of methodological individualists and social realists. The author’s conclusion is that the scope of mechanistic explanation may be limited due to the extreme complexity of many social systems. Key Words: emergence • mechanism • computer simulation • methodological individualism • social realism. (shrink)

This paper aims at integrating the work onanalogical reasoning in Cognitive Science into thelong trend of philosophical interest, in this century,in analogical reasoning as a basis for scientificmodeling. In the first part of the paper, threesimulations of analogical reasoning, proposed incognitive science, are presented: Gentner''s StructureMatching Engine, Mitchel''s and Hofstadter''s COPYCATand the Analogical Constraint Mapping Engine, proposedby Holyoak and Thagard. The differences andcontroversial points in these simulations arehighlighted in order to make explicit theirpresuppositions concerning the nature of analogicalreasoning. In the (...) last part, this debate in cognitivescience is applied to some traditional philosophicalaccounts of formal and material analogies as a basisfor scientific modeling, like Mary Hesse`s, and tomore recent ones, that already draw from the work inArtificial Intelligence, like that proposed byAronson, Harré and Way. (shrink)

In Part 1 of this wide-ranging interview Heikki Patomäki discusses his early work and career up to the Global Financial Crisis. He provides comment on his role as a public intellectual and activist, his diverse academic interests and influences, and the many and varied ways he has contributed to critical realism and critical realism has influenced his work. In Part 2 he discusses his later work, the predicament of humanity and the role of futures studies.

The relation between theoretical models and metaphors has been studied since at least the 1950s. The relation between metaphors and mathematical modelling is less well researched. This article takes the media coverage of the foot and mouth modelling exercise in 2001 as an occasion to examine the metaphors of mathematical modelling that were proposed by the UK press during that time to make sense of this new scientific policy tool. One can detect a gradual change in metaphor use by the (...) newspapers from conceptualizing modellers as detectives and models as mapping tools to modellers as soldiers and heroes, to modellers as liars and models as tools to distort the truth. This seems to indicate a shift in reporting from seeing models as a legitimate and "objective" basis used by decision makers to pursue science-based policies towards seeing models as tools used to legitimize increasingly difficult political decisions. (shrink)

Metaphor influences the construction of biological models and theories and the analysis of its use can reveal important tools of thought. Some aspects of biological organisation are investigated through the analysis of metaphors associated with treating biosystems as a kind of text. In particular, the use of glue and verbs is considered. Some of the reasons why glue is important in the construction of hierarchies are pursued in the light of specific examples, and some of the conceptual links between glue (...) in biology and other domains is discussed. Verbs are shown to be important in the construction of networks. Some of the relations between glue, verb and text are considered and the text metaphor is placed within a much broader context of ideas associated with form, relation and system. The paper concludes with comments on the nature of biological information and the need for extending or better understanding the verbal vocabulary. (shrink)

This paper is a reply to the discussions of Ruth Groff, Dave Elder-Vass, Daniel Little, and Petri Ylikoski of Tuukka Kaidesoja : Naturalizing Critical Realist Social Ontology.

This article offers a critical review of various ontological-relativist arguments, mostly deriving from the work of W. V. Quine and Thomas K hn. I maintain that these arguments are (1) internally contradictory, (2) incapable of accounting for our knowledge of the growth of scientific knowledge, and (3) shown up as fallacious from the standpoint of a causal-realist approach to issues of truth, meaning, and interpretation. Moreover, they have often been viewed as lending support to such programmes as the 'strong' sociology (...) of knowledge and the turn towards wholesale cultural-relativist doctrines, whether of the Wittgensteinian ('language-games') or Heideggerian (depth-hermeneutic) varieties. Thus Richard Rorty recommends that we should henceforth drop all that old-fashioned talk of 'truth', 'knowledge', or 'reality', since whatever warrants those descriptions from time to time is just the product of some currently favoured language-game or range of elective metaphors. Such ideas have little in common with Quine's general outlook of robust physicalism, nor again - though the case is less clear - with Kuhn's reconsidered approach to these issues as set forth in his 1969 Postscript to The Structure of Scientific Revolutions . However, both thinkers have left themselves open to misconstrual by adopting a sceptical-relativist fallback position in response to the well-known problems with logical empiricism. This essay therefore reviews those problems with reference to alternative, more adequate accounts of what is involved in the process of scientific discovery and theory-change. (shrink)

This paper argues that the philosophy of explanation can help inform core debates in value theory. Specifically, it argues that there is a consistent parallelism between the properties of explanation and the properties of justification such that one can reasonably infer that any property of explanation has a counterpart property of justification. Thus, by appealing to facts about the nature of explanation, one can derive various conclusions about the justifications offered by normative theorists. The paper illustrates this point by considering (...) a debate within political philosophy over whether inequality requires justification in a way that equality does not. Egalitarians typically presume an affirmative answer to this question. However, libertarian critics note that this justificatory asymmetry cannot be simply assumed without argument. This paper argues that, by appealing to the explanation-justification parallelism, one can resolve this debate in favor of the egalitarians, as there are two properties of explanation, the justificatory analogs of which vindicate the egalitarian presumption. (shrink)

This comment discusses Kaidesoja and raises the issue whether his analysis justifies stronger conclusions than he presents in the book. My comments focus on four issues. First, I argue that his naturalistic reconstruction of critical realist transcendental arguments shows that transcendental arguments should be treated as a rare curiosity rather than a general argumentative strategy. Second, I suggest that Kaidesoja’s analysis does not really justify his optimism about the usefulness of causal powers ontology in the social sciences. Third, I raise (...) some doubts about the heuristic value of Mario Bunge’s social ontology that Kaidesoja presents as a replacement for critical realist ontology. Finally, I propose an alternative way to analyze failures of aggregativity that might better serve Kaidesoja’s purposes than the Wimsattian scheme he employs in the book. (shrink)

The explanatory power of structures in analytical sociologists’ agent-based models brings into question methodological individualism. We defend that from an explanatory point of view, the syntactic properties of models require semantic conditions of interpretation drawn from a conceptual research framework; in such a framework, social/relational structures have only partial, explanatory power ; and taking the explanation further through generative mechanism modeling necessitates calling upon methodological individualism’s generic framework of interpretation that relies on social actors’ rational capacity. According to this interpretive (...) framework, forces in action in society are governed by the subjective meaning of/the reasons for individual actions. (shrink)