Philosophers of biology typically pose questions about individuation by asking “what is an individual?” For example, we ask, “what is an individual species”, “what is an individual organism”, and “what is an individual gene?” In the first part of this chapter, I present my account of the gene concept and how it is used in investigative practices in order to motivate a more pragmatic approach. Instead of asking “what is a gene?”, I ask: “how do biologists individuate genes?”, “for what (...) purposes?”, and “do their practices of individuating genes serve these purposes?" In the second part of this chapter, I propose that we use this approach when analyzing concepts of organisms and biological individuals. Following philosophical pragmatism, I argue that we should abstain from attempts to situate individuation of Darwinian individuals or of holobionts in a philosophy of nature. Instead, we should analyze practices of individuating organisms in terms of three-place relations between the world, ideas, and human purposes and actions. I conclude with three lessons: an ontological, an epistemological, and a meta-philosophical lesson, which I suggest, apply to philosophy of science generally and to philosophy and metaphysics at large. (shrink)

Natural genome editing from a biocommunicative perspective is the competent agent-driven generation and integration of meaningful nucleotide sequences into pre-existing genomic content arrangements, and the ability to (re-)combine and (re-)regulate them according to context-dependent (i.e. adaptational) purposes of the host organism. Natural genome editing integrates both natural editing of genetic code and epigenetic marking that determines genetic reading patterns. As agents that edit genetic code and epigenetically mark genomic structures, viral and subviral agents have been suggested because they may be (...) evolutionarily older than cellular life. This hypothesis that viruses and viral-like agents edit genetic code is developed according to three well investigated examples that represent key evolutionary inventions in which non-lytic viral swarms act symbiotically in a persistent lifestyle within cellular host genomes: origin of eukaryotic nucleus, adaptive immunity, placental mammals. Additionally an abundance of various RNA elements cooperate in a variety of steps and substeps as regulatory and catalytic units with multiple competencies to act on the genetic code. Most of these RNA agents such as transposons, retroposons and small non-coding RNAs act consortially and are remnants of persistent viral infections that now act as co-opted adaptations in cellular key processes. (shrink)

I provide a brief history of pragmatics as it relates to explanation, highlighting the great neglect of pragmatics and pragmatic considerations in regard to explanation during the mid-twentieth century. In order to understand pragmatic considerations regarding explanation, I utilize the work of Bas C. van Fraassen, Peter Achinstein, and Jan Faye. These thinkers provide crucial tools for understanding pragmatics, especially with regard to concepts such as context and exigence. The work of these thinkers provides the platform from which I compose (...) a definition of pragmatic considerations. (shrink)

Since the pioneering work by Kripke and Montague, the term possible world has appeared in most theories of formal semantics for modal logics, natural languages, and knowledge-based systems. Yet that term obscures many questions about the relationships between the real world, various models of the world, and descriptions of those models in either formal languages or natural languages. Each step in that progression is an abstraction from the overwhelming complexity of the world. At the end, nothing is left but a (...) colorful metaphor for an undefined element of a set W called worlds, which are related by an undefined and undefinable primitive relation R called accessibility. For some purposes, the resulting abstraction has proved to be useful, but as a general theory of meaning, the abstraction omits too many significant features. So much information has been lost at each step that many philosophers, linguists, and psychologists have dismissed model-theoretic semantics as irrelevant to the study of meaning. This article examines the steps in the process of extractingthe pair (W,R) from the world and the way people talk about the world. It shows that the Kripke worlds can be reinterpreted as part of a Peircean semiotic theory, which can also include contributions from many other studies in cognitive science. Among them are Dunn’s semantics based on laws and facts, the lexical semantics preferred by manylinguists, psychological models of how the world is perceived, and philosophies of science that relate theories to the world. A full integration of all those sources is far beyond the scope of this article, but an outline of the approach suggests that Peirce’s vision is capable of relating and reconciling the competing sources. (shrink)

In the spring of 1937, the University of Chicago Press mailed hundreds of subscription forms for its latest enterprise – a projected series of twenty short monographs by various philosophers and scientists. Together the monographs were to form the first section of the International Encyclopedia of Unified Science. Included in each mailing was an introductory prospectus which began:Recent years have witnessed a striking growth of interest in the scientific enterprise as a whole and especially in the unity of science. The (...) concern throughout the world for the logic of science, the history of science, and the sociology of science reveals a comprehensive international movement interested in considering science as a whole in terms of the scientific temper itself. A science of science is appearing. The extreme specialization within science demands as its corrective an interest in the scientific edifice in its entirety. This is especially necessary if science is to satisfy its inherent urge for the systematization of its results and methods and if science is to perform adequately its educational role in the modern world. Science is gradually rousing itself for the performance of its total task. (shrink)

Ford’s Helen Keller Was Never in a Chinese Room claims that my argument in How Helen Keller Used Syntactic Semantics to Escape from a Chinese Room fails because Searle and I use the terms ‘syntax’ and ‘semantics’ differently, hence are at cross purposes. Ford has misunderstood me; this reply clarifies my theory.

Turner argues that computer programs must have purposes, that implementation is not a kind of semantics, and that computers might need to understand what they do. I respectfully disagree: Computer programs need not have purposes, implementation is a kind of semantic interpretation, and neither human computers nor computing machines need to understand what they do.

A computer can come to understand natural language the same way Helen Keller did: by using “syntactic semantics”—a theory of how syntax can suffice for semantics, i.e., how semantics for natural language can be provided by means of computational symbol manipulation. This essay considers real-life approximations of Chinese Rooms, focusing on Helen Keller’s experiences growing up deaf and blind, locked in a sort of Chinese Room yet learning how to communicate with the outside world. Using the SNePS computational knowledge-representation system, (...) the essay analyzes Keller’s belief that learning that “everything has a name” was the key to her success, enabling her to “partition” her mental concepts into mental representations of: words, objects, and the naming relations between them. It next looks at Herbert Terrace’s theory of naming, which is akin to Keller’s, and which only humans are supposed to be capable of. The essay suggests that computers at least, and perhaps non-human primates, are also capable of this kind of naming. (shrink)

Exposing the chimpanzee to language training appears to enhance the animal's ability to perform some kinds of tasks but not others. The abilities that are enhanced involve abstract judgment, as in analogical reasoning, matching proportions of physically unlike exemplars, and completing incomplete representations of action. The abilities that do not improve concern the location of items in space and the inferences one might make in attempting to obtain them. Representing items in space and making inferences about them could be done (...) with an imaginal code, but representing relations and judging the relations between them, as in analogies, requires a more abstract code. Language training cannot instill such an abstract code, but for species that have the code to start with, it may enhance the animal's ability to use it. (shrink)

The main approaches to semiotic inquiry today contradict the idea of the individual as a separate and self-sufficient entity. The body of an organism in the micro- and macrocosm is not an isolated biological entity, it does not belong to the individual, it is not a separate and self-sufficient sphere in itself. The body is an organism that lives in relation to other bodies, it is intercorporeal and interdependent. This concept of the body finds confirmation in cultural practices and worldviews (...) based on intercorporeity, interdependency, exposition and opening, though nowadays such practices are almost extinct. An approach to semiotics that is global and at once capable of surpassing the illusory idea of definitive and ultimate boundaries to identity presupposes dialogue and otherness. Otherness obliges identity to question the tendency to totalizing closure and to reorganize itself always anew in a process related to ‘infinity’, as Emmanuel Levinas teaches us, or to ‘infinite semiosis’, to say it with Charles Sanders Peirce. Another topic of this paper is the interrelation in anthroposemiosis between man and machine and the implications involved for the future of humanity. Our overall purpose is to develop global semiotics in the direction of “semioethics”, as proposed by S.Petrilli and A. Ponzio and their ongoing research. (shrink)

The main approaches to semiotic inquiry today contradict the idea of the individual as a separate and self-sufficient entity. The body of an organism in the micro- and macrocosm is not an isolated biological entity, it does not belong to the individual, it is not a separate and self-sufficient sphere in itself. The body is an organism that lives in relation to other bodies, it is intercorporeal and interdependent. This concept of the body finds confirmation in cultural practices and worldviews (...) based on intercorporeity, interdependency, exposition and opening, though nowadays such practices are almost extinct. An approach to semiotics that is global and at once capable of surpassing the illusory idea of definitive and ultimate boundaries to identity presupposes dialogue and otherness. Otherness obliges identity to question the tendency to totalizing closure and to reorganize itself always anew in a process related to ‘infinity’, as Emmanuel Levinas teaches us, or to ‘infinite semiosis’, to say it with Charles Sanders Peirce. Another topic of this paper is the interrelation in anthroposemiosis between man and machine and the implications involved for the future of humanity. Our overall purpose is to develop global semiotics in the direction of “semioethics”, as proposed by S.Petrilli and A. Ponzio and their ongoing research. (shrink)

It seems that the theories of language of the present century can be classified into two basic groups. The approaches of the first group perceive language as a mathematical structure and understand any theory of language as a kind of application of mathematics or logic. Their ideological background is furnished by logical positivism and analytical philosophy (esp. by Russell, Carnap, Wittgenstein and their followers); and their practical output is Chomskian formal syntax and subsequent formal semantics. The approaches of the other (...) group do not approve of formalization and consider a theory of language closer to psychology than to mathematics. The specific position within this group is occupied by the so-called structuralists (de Saussure, Hjelmslev, Derrida). (shrink)

The introduction claims that there might exist an evolutionary bridge from possible genres in nature to human cultural genres. A sub-hypothesis is that basic life-conditions, partly common for animals and humans, in the long run can generate so-called life-genres. To investigate such hypotheses a framework of interrelated key communicational concepts is outlined in the second, main part. Four levels are suggested. Signs are seen as elements in utterances. Further, sufficiently similar utterances can be perceived as kinds of utterances or genres. (...) Genres are kinds of communication in a species' life-world. Utterance and genre are the framework’s key concepts. Both are seen as products and processes and as constituted by five reciprocal aspects: form, content, act, time, and space, the necessary elements to initiate and interpret communication. A model illustrates this integrative principle. Part three dwells with the idea of life-genres, and part four exemplifies and problematises how a chimpanzee’s ‘begging’ for meat, a fish’s nest-making, and kinds of birdsongs, could be seen as possible life-genres. The last, short part gives a brief summary, highlights challenges, and reflects over the framework’s relevance for biosemiotics. (shrink)

Although commonly cited as one of the philosophers responsible for the resurgence of interest in pragmatism, Wilfrid Sellars was also the son of Roy Wood Sellars, one of the most dedicated critical realists of the early 20th century. Given his father’s realism and his own ‘scientific realism,’ one might assume that the history of realism – and, despite contemporary interest, not pragmatism – would best serve as the historical background for Wilfrid Sellars’ philosophy. I argue that Wilfrid Sellars, far from (...) being the adherent to classical pragmatism assumed by some, holds more in common with critical realism - specifically, a realism that was framed in opposition to pragmatism – than one finds amongst the writings of Charles Sanders Peirce, William James, or John Dewey. I support this claim by examining Wilfrid Sellars’ adoption of his father’s criticisms of C.I. Lewis, and offer various arguments and historical considerations against thematic accounts that insist on a strong connection between Wilfrid Sellars and pragmatism. (shrink)

All contributions included in the present issue were originally prepared for an “Author Meets Critics” session organized by Carl Sachs for the Eastern Division Meeting of the American Philosophical Association in Savannah, Georgia, on 5th January, 2018.

Despite its enormous popularity, Russell’s theory of definite descriptions has received various criticisms. Two of the most important objections against this theory are those arising from the Argument from Incompleteness and the Argument from Donnellan’s Distinction. According to the former although a speaker may say something true by assertively uttering a sentence containing an incomplete description , on the Russellian analysis such a sentence expresses a false proposition; so, Russell’s theory cannot adequately deal with such sentences. According to the latter (...) objection a descriptive sentence is actually ambiguous—it expresses a general proposition when the description contained in it is used attributively, and a singular proposition when the description in question is used referentially; Russell’s theory is inadequate as it fails to capture this ambiguity and offers an analysis according to which a descriptive sentence expresses only a general proposition. These objections are examined in the present dissertation. It is shown here that these objections arise from: (i) ignoring the distinction between the meaning of a sentence and the assertions made by using it, (ii) the failure to distinguish between the semantic meaning of a sentence and the pragmatic meaning with which it is used on a particular occasion. To make the distinction mentioned in (i), a significant part of Scott Soames’ theory concerning meaning and assertions has been adopted in this dissertation; and, to make the distinction mentioned in (ii), a test, namely the cancellability test, and two Distinguishing Criteria, namely DC-1 and DC-2, have been developed here. It has been argued here that if we properly make the relevant distinctions, then we will find that: (a) the phenomenon cited by the Argument from Incompleteness can be well explained keeping the Russellian analysis of descriptive sentences intact, (b) the phenomenon arising from the Argument from Donnellan’s Distinction raises an issue of pragmatics and is irrelevant to Russell’s semantic analysis of descriptive sentences. So, none of the above criticisms poses a genuine threat to Russell’s theory of definite descriptions; his theory actually provides, to a large extent, a correct semantic analysis of descriptive sentences. (shrink)

Approaches to animal communication have for the most part been quite different in semiotics and evolutionary biology. In this context the writings of a leading evolutionary biologist who has also been attracted to semiotics — John Maynard Smith — are an interesting exception and object of study. The present article focuses on the use and adaptation of semiotic terminology in Maynard Smith’s works with reference to general theoretical premises both in semiotics and evolutionary biology. In developing a typology of animal (...) signals, Maynard Smith employs the concepts of icon, index and symbol to denote distinct signal classes.He uses “indices” or “indexes” to express a signal type where the relation between signal properties and meaning is restricted because of physical characteristics. Such approach also points out the issue of the motivatedness of signs, which has had a long history in semiotics. In the final part of the article the usage and content of the concepts of signal form and meaning in Maynard Smith’s writings are analysed. It appears that in evolutionary biology, the “signal” is a vague concept that may denote a variety of things from an animal’s specific physiological status to artificial theoretical constructs. It also becomes evident that in actual usage the concept of signal often includes references to the receiver’s activity and interpretation, which belong rather to the characteristics of sign process. The positive influence of Maynard Smith’s works on semiotics could lie in paying attention to the role of physical necessities in animal communication. Physicalconstraints and relations also seem to have a significant role in semiotic processes although this is not always sufficiently studied or understood in semiotics. (shrink)

The aim of this paper is to analyze the differences and similarities between the linguistic and the logical meaning of a sentence and propose a uniform point of view on the notion of the meaning of utterances. The proposed notion differs from the notion of the logical meaning as well as from the linguistic one. It may be considered to be a kind of composition of both of them.

Je défends la classification carnapienne des disciplines sémiotiques en montrant qu'elle permet de caractériser adéquatement la nature de la pragmatique. J'indique, en particulier, comment une notion de système pragmatique pourrait être développée par analogie avec celles de système syntaxique et de système sémantique.I defend Carnap's classification of semiotic disciplines by showing that it leads to an adequate characterization of the nature of pragmatics. In particular, I indicate how a notion of pregmatic system could be constructed on the analogy with those (...) of syntactic system and semantic system. (shrink)

Employing the theory of Birkhoff polarities as a model of model theory yields an inductively defined dual structure which is a formalization of semantics and which allows for simple proofs of some new results for model theory.

Paul Feyerabend once made a remark to the effect that his pragmatic theory of observation can be traced back to proposals put forward by leading Logical Empiricists during the height of the protocol sentence debate. In this paper I want to vindicate the systematic side of Feyerabend’s remark and show that a pragmatic theory of observation can in fact be found in Rudolf Carnap’s writings of 1932. I first proceed to dispel a misunderstanding concerning the term “pragmatic” raised by Thomas (...) Oberdan. Following Morris’ and Carnap’s documented usage, I show that the intended meaning of “pragmatic” refers to a specific semiotic relation between users of a language and their environment describable by empirical means. I reconstruct such a pragmatic theory in terms of a detector model that interprets observation sentences as bodily dispositions indicating physical events in the surroundings of the detector. I then proceed to show how Feyerabend’s later theory of observation picks up central features of Carnap’s account and also shares some of the motivations. I conclude by noting how an empirical theory of observation sentences offers a bootstrapping solution to the “basis problem”. (shrink)

In its predominant form, the understanding of the neurosciences, which stand in high public esteem, is a naturalistic one. The critique of this naturalism concerns the technical modelling of brain functions as a syntactic or control loop machine. Adequate solutions to the mind-body problem are not found in this way.

Koopman’s book revolves around the notion of transition, which he proposes is one of the central ideas of the pragmatist tradition but one which had not previously been fully articulated yet nevertheless shapes the pragmatist attitude in philosophy. Transition, according to Koopman, denotes “those temporal structures and historical shapes in virtue of which we get from here to there”. One of the consequences of transitionalism is the understanding of critique and inquiry as historical pro...

A leading theoretical framework for naturalistic explanation of mind holds that we explain the mind by positing progressively "stupider" capacities ("homunculi") until the mind is "discharged" by means of capacities that are not intelligent at all. The so-called homuncular fallacy involves violating this procedure by positing the same capacities at subpersonal levels. I argue that the homuncular fallacy is not a fallacy, and that modern-day homunculi are idle posits. I propose an alternative view of what naturalism requires that reflects how (...) the cognitive sciences are actually integrating mind and matter. (shrink)

The state of computing science and, particularly, software engineering and knowledge engineering is generally considered immature. The best starting point for achieving a mature engineering discipline is a solid scientific theory, and the primary reason behind the immaturity in these fields is precisely that computing science still has no such agreed upon underlying theory. As theories in other fields of science do, this paper formally establishes the fundamental elements and postulates making up a first attempt at a theory in this (...) field, considering the features and peculiarities of computing science. The fundamental elements of this approach are informons and holons, and it is a general and comprehensive theory of software engineering and knowledge engineering that related disciplines (e.g., information systems) can particularise and/or extend to take benefit from it (Lakatos’ concepts of core theory and protective belt theories). (shrink)