Results for 'Karen A. Nolan'

965 found
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  1. Conditionals and Curry.Daniel Nolan - 2016 - Philosophical Studies 173 (10):2629-2647.
    Curry's paradox for "if.. then.." concerns the paradoxical features of sentences of the form "If this very sentence is true, then 2+2=5". Standard inference principles lead us to the conclusion that such conditionals have true consequents: so, for example, 2+2=5 after all. There has been a lot of technical work done on formal options for blocking Curry paradoxes while only compromising a little on the various central principles of logic and meaning that are under threat. -/- Once we have a (...)
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  2. The Unreasonable Effectiveness of Abstract Metaphysics.Daniel Nolan - 2015 - Oxford Studies in Metaphysics 9:61-88.
    In Metaphysics A, Aristotle offers some objections to Plato’s theory of Forms to the effect that Plato’s Forms would not be explanatory in the right way, and seems to suggest that they might even make the explanatory project worse. One interesting historical puzzle is whether Aristotle can avoid these same objections to his own theory of universals. The concerns Aristotle raises are, I think, cousins of contemporary concerns about the usefulness and explanatoriness of abstract objects, some of which have recently (...)
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  3. The A Posteriori Armchair.Daniel Nolan - 2015 - Australasian Journal of Philosophy 93 (2):211-231.
    A lot of good philosophy is done in the armchair, but is nevertheless a posteriori. This paper clarifies and then defends that claim. Among the a posteriori activities done in the armchair are assembling and evaluating commonplaces; formulating theoretical alternatives; and integrating well-known past a posteriori discoveries. The activity that receives the most discussion, however, is the application of theoretical virtues to choose philosophical theories: the paper argues that much of this is properly seen as a posteriori.
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  4. Quantitative parsimony.Daniel Nolan - 1997 - British Journal for the Philosophy of Science 48 (3):329-343.
    In this paper, I motivate the view that quantitative parsimony is a theoretical virtue: that is, we should be concerned not only to minimize the number of kinds of entities postulated by our theories (i. e. maximize qualitative parsimony), but we should also minimize the number of entities postulated which fall under those kinds. In order to motivate this view, I consider two cases from the history of science: the postulation of the neutrino and the proposal of Avogadro's hypothesis. I (...)
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  5. Conditionals, Supposition and Euthyphro.Daniel Nolan - forthcoming - Inquiry: An Interdisciplinary Journal of Philosophy.
    Williamson proposes that a "suppositional procedure" is a central heuristic we use to evaluate the truth of conditionals, though he also argues that this method often leads us astray. An alternative approach to the link between supposition and conditionals is to claim that we are guided by our antecedent conditional judgements in our supposing, and in particular in our determining which things follow from an initial supposition. This alternative explanation of the close link between conditionals and supposition is developed and (...)
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  6. A domain ontology for the non-coding RNA field.Jingshan Huang, Karen Eilbeck, Judith A. Blake, Dejing Dou, Darren A. Natale, Alan Ruttenberg, Barry Smith, Michael T. Zimmermann, Guoqian Jiang & Yu Lin - 2015 - In Huang Jingshan, Eilbeck Karen, Blake Judith A., Dou Dejing, Natale Darren A., Ruttenberg Alan, Smith Barry, Zimmermann Michael T., Jiang Guoqian & Lin Yu (eds.), IEEE International Conference on Bioinformatics and Biomedicine (IEEE BIBM 2015). pp. 621-624.
    Identification of non-coding RNAs (ncRNAs) has been significantly enhanced due to the rapid advancement in sequencing technologies. On the other hand, semantic annotation of ncRNA data lag behind their identification, and there is a great need to effectively integrate discovery from relevant communities. To this end, the Non-Coding RNA Ontology (NCRO) is being developed to provide a precisely defined ncRNA controlled vocabulary, which can fill a specific and highly needed niche in unification of ncRNA biology.
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  7. Protein Ontology: A controlled structured network of protein entities.A. Natale Darren, N. Arighi Cecilia, A. Blake Judith, J. Bult Carol, R. Christie Karen, Cowart Julie, D’Eustachio Peter, D. Diehl Alexander, J. Drabkin Harold, Helfer Olivia, Barry Smith & Others - 2013 - Nucleic Acids Research 42 (1):D415-21..
    The Protein Ontology (PRO; http://proconsortium.org) formally defines protein entities and explicitly represents their major forms and interrelations. Protein entities represented in PRO corresponding to single amino acid chains are categorized by level of specificity into family, gene, sequence and modification metaclasses, and there is a separate metaclass for protein complexes. All metaclasses also have organism-specific derivatives. PRO complements established sequence databases such as UniProtKB, and interoperates with other biomedical and biological ontologies such as the Gene Ontology (GO). PRO relates to (...)
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  8. Space, time and parsimony.Daniel Nolan - 2022 - Noûs 57 (4):763-783.
    This paper argues that all of the standard theories about the divisions of space and time can benefit from, and may need to rely on, parsimony considerations. More specifically, whether spacetime is discrete, gunky or pointy, there are wildly unparsimonious rivals to standard accounts that need to be resisted by proponents of those accounts, and only parsimony considerations offer a natural way of doing that resisting. Furthermore, quantitative parsimony considerations appear to be needed in many of these cases.
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  9. Counterpossibles, Consequence and Context.Daniel Nolan - forthcoming - Inquiry: An Interdisciplinary Journal of Philosophy.
    What is the connection between valid inference and true conditionals? Many conditional logics require that when A is a logical consequence of B, "if B then A" is true. Taking counterlogical conditionals seriously leads to systems that permit counterexamples to that general rule. However, this leaves those of us who endorse non-trivial accounts of counterpossible conditionals to explain what the connection between conditionals and consequence is. The explanation of the connection also answers a common line of objection to non-trivial counterpossibles, (...)
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  10. Defining a crisis: the roles of principles in the search for a theory of quantum gravity.Karen Crowther - 2021 - Synthese 198 (Suppl 14):3489-3516.
    In times of crisis, when current theories are revealed as inadequate to task, and new physics is thought to be required—physics turns to re-evaluate its principles, and to seek new ones. This paper explores the various types, and roles of principles that feature in the problem of quantum gravity as a current crisis in physics. I illustrate the diversity of the principles being appealed to, and show that principles serve in a variety of roles in all stages of the crisis, (...)
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  11. Individuals enough for classes.Daniel Nolan - 2004
    This paper builds on the system of David Lewis’s “Parts of Classes” to provide a foundation for mathematics that arguably requires not only no distinctively mathematical ideological commitments (in the sense of Quine), but also no distinctively mathematical ontological commitments. Provided only that there are enough individual atoms, the devices of plural quantification and mereology can be employed to simulate quantification over classes, while at the same time allowing all of the atoms (and most of their fusions with which we (...)
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  12.  32
    When Do We Stop Digging? Conditions on a Fundamental Theory of Physics.Karen Crowther - 2019 - In Anthony Aguirre, Brendan Foster & Zeeya Merali (eds.), What is Fundamental? Cham: Springer Verlag. pp. 123-133.
    In seeking an answer to the question of what it means for a theory to be fundamental, it is enlightening to ask why the current best theories of physics are not generally believed to be fundamental. This reveals a set of conditions that a theory of physics must satisfy in order to be considered fundamental. Physics aspires to describe ever deeper levels of reality, which may be without end. Ultimately, at any stage we may not be able to tell whether (...)
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  13. The Non-Coding RNA Ontology : a comprehensive resource for the unification of non-coding RNA biology.Huang Jingshan, Eilbeck Karen, Barry Smith, A. Blake Judith, Dou Dejing, Huang Weili, A. Natale Darren, Ruttenberg Alan, Huan Jun & T. Zimmermann Michael - 2016 - Journal of Biomedical Semantics 7 (1).
    In recent years, sequencing technologies have enabled the identification of a wide range of non-coding RNAs (ncRNAs). Unfortunately, annotation and integration of ncRNA data has lagged behind their identification. Given the large quantity of information being obtained in this area, there emerges an urgent need to integrate what is being discovered by a broad range of relevant communities. To this end, the Non-Coding RNA Ontology (NCRO) is being developed to provide a systematically structured and precisely defined controlled vocabulary for the (...)
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  14. Platitudes and metaphysics.Daniel Nolan - 2008 - In David Braddon-Mitchell & Robert Nola (eds.), Conceptual Analysis and Philosophical Naturalism. Bradford.
    One increasingly popular technique in philosophy might be called the "platitudes analysis": a set of widely accepted claims about a given subject matter are collected, adjustments are made to the body of claims, and this is taken to specify a “role” for the phenomenon in question. (Perhaps the best-known example is analytic functionalism about mental states, where platitudes about belief, desire, intention etc. are together taken to give us a "role" for states to fill if they are to count as (...)
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  15. Zurvanist Supersubstantivalism.Daniel Nolan - 2023 - Asian Journal of Philosophy 2 (2):1-19.
    Zurvanism was an ancient variant of Zoroastrianism. According to Zurvanism, the great powers of good and evil, Ahura Mazda and Angra Mainyu, were the sons of a greater god Zurvan, associated with time. According to Eudemus of Rhodes, some Persian thinkers, presumably Zurvanists, took there to be three great principles underlying the world: light, darkness, and greatest of all time (or perhaps, according to Eudemus, space). This paper explores what metaphysics might underlie these doctrines, and what contemporary options we have (...)
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  16. The Ontological Status of Cartesian Natures.Lawrence Nolan - 1997 - Pacific Philosophical Quarterly 78 (2):169–194.
    In the Fifth Meditation, Descartes makes a remarkable claim about the ontological status of geometrical figures. He asserts that an object such as a triangle has a 'true and immutable nature' that does not depend on the mind, yet has being even if there are no triangles existing in the world. This statement has led many commentators to assume that Descartes is a Platonist regarding essences and in the philosophy of mathematics. One problem with this seemingly natural reading is that (...)
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  17. It’s a kind of magic: Lewis, magic and properties.Daniel Nolan - 2020 - Synthese 197 (11):4717-4741.
    David Lewis’s arguments against magical ersatzism are notoriously puzzling. Untangling different strands in those arguments is useful for bringing out what he thought was wrong with not just one style of theory about possible worlds, but with much of the contemporary metaphysics of abstract objects. After setting out what I take Lewis’s arguments to be and how best to resist them, I consider the application of those arguments to general theories of properties and relations. The constraints Lewis motivates turn out (...)
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  18. Renormalizability, fundamentality and a final theory: The role of UV-completion in the search for quantum gravity.Karen Crowther & Niels Linnemann - 2017 - British Journal for the Philosophy of Science 70 (2):377–406.
    Principles are central to physical reasoning, particularly in the search for a theory of quantum gravity (QG), where novel empirical data is lacking. One principle widely adopted in the search for QG is UV completion: the idea that a theory should (formally) hold up to all possible high energies. We argue---/contra/ standard scientific practice---that UV-completion is poorly-motivated as a guiding principle in theory-construction, and cannot be used as a criterion of theory-justification in the search for QG. For this, we explore (...)
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  19. A consistent reading of Sylvan's box.Daniel Nolan - 2007 - Philosophical Quarterly 57 (229):667-673.
    I argue that Graham Priest's story 'Sylvan's Box' has an attractive consistent reading. Priest's hope that this story can be used as an example of a non-trivial 'essentially inconsistent' story is thus threatened. I then make some observations about the role 'Sylvan's Box' might play in a theory of unreliable narrators.
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  20. Self-knowledge in Descartes and Malebranche.Lawrence Nolan & John Whipple - 2005 - Journal of the History of Philosophy 43 (1):55-81.
    In lieu of an abstract, here is a brief excerpt of the content:Journal of the History of Philosophy 43.1 (2005) 55-81 [Access article in PDF] Self-Knowledge in Descartes and Malebranche Lawrence Nolan John Whipple 1. Introduction Descartes's notorious claim that mind is better known than body has been the target of repeated criticisms, but none appears more challenging than that of his intellectual heir Nicolas Malebranche.1 Whereas other critics—especially twentieth-century philosophers eager to use Descartes as their whipping boy—have often (...)
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  21. Classes, Worlds and Hypergunk.Daniel Nolan - 2004 - The Monist 87 (3):303-321.
    The question of what truths are necessary in the broadest possible sense is a difficult one to answer, as is the question of what the limits are to what is possible. (Most people would see these two questions as different sides of the same coin, of course, since many think the question of what is possible is just the question of what is not necessarily ruled out). We have three general sorts of strategies for determining whether something is necessary (or (...)
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  22. Grounding, Explanation, and the Tasks of Metaphysics.Daniel Nolan - forthcoming - In Aaron Segal & Nick Stang (eds.), Systematic Metaphysics: Historical and Contemporary Perspectives. Oxford University Press.
    Thinking about metaphysical problems in terms of grounding has its uses, but those uses are limited. This paper argues against attempts to see issues of grounding as having a central and organising role in metaphysical inquiry. After arguing that grounding does some useful work, this paper will argue that grounding is neither the central tool for understanding explanation in metaphysics, nor defines the subject matter of metaphysics. Instead, grounding tracks only some of the metaphysical explanations we should be looking for, (...)
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  23. When do we stop digging? Conditions on a fundamental theory of physics.Karen Crowther - 2019 - In Anthony Aguirre, Brendan Foster & Zeeya Merali (eds.), What is Fundamental? Cham: Springer Verlag. pp. 123-133.
    In seeking an answer to the question of what it means for a theory to be fundamental, it is enlightening to ask why the current best theories of physics are not generally believed to be fundamental. This reveals a set of conditions that a theory of physics must satisfy in order to be considered fundamental. Physics aspires to describe ever deeper levels of reality, which may be without end. Ultimately, at any stage we may not be able to tell whether (...)
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  24. (1 other version)Truthmakers and Predication.Daniel Nolan - 2008 - Oxford Studies in Metaphysics 4:171-192.
    To what extent do true predications correspond to truthmakers in virtue of which those predications are true? One sort of predicate which is often thought to not be susceptible to an ontological treatment is a predicate for instantiation, or some corresponding predication (trope-similarity or set-membership, for example). This paper discusses this question, and argues that an "ontological" approach is possible here too: where this ontological approach goes beyond merely finding a truthmaker for claims about instantiation. Along the way a version (...)
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  25. Charitable Matching and Moral Credit.Daniel Nolan - 2024 - Philosophy and Phenomenological Research 108 (3):687-696.
    When charitable matching occurs, both the person initially offering the matching donation and the person taking up the offer may well feel they have done something better than if they had donated on their own without matching. They may well feel they deserve some credit for the matched donation as well as their own. Can they both be right? Natural assumptions about charitable matching lead to puzzles that are challenging to resolve in a satisfactory way.
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  26. Properties and Paradox in Graham Priest’s Towards Non-Being.Daniel Nolan - 2008 - Philosophy and Phenomenological Research 76 (1):191 - 198.
    Part of a book symposium on Graham Priest's Towards Non-Being.
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  27.  82
    Virtuous Motivation.Karen Stohr - 2017 - In Nancy E. Snow (ed.), The Oxford Handbook of Virtue. New York, USA: Oxford University Press. pp. 453-469.
    In this paper I describe and defend an account of virtuous motivation that differs from what we might call ordinary moral motivation. It is possible to be morally motivated without being virtuously motivated. In the first half of the essay, I explore different senses of moral motivation and the philosophical puzzles and problems it poses. In the second half, I give an account of virtuous motivation that, unlike ordinary moral motivation, requires the motivational structure characteristic of a fully virtuous person. (...)
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  28. Proxy “Actualism”.Karen Bennett - 2006 - Philosophical Studies 129 (2):263-294.
    Bernard Linsky and Edward Zalta have recently proposed a new form of actualism. I characterize the general form of their view and the motivations behind it. I argue that it is not quite new – it bears interesting similarities to Alvin Plantinga’s view – and that it definitely isn’t actualist.
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  29. Contemporary Metaphysicians and Their Traditions.Daniel Nolan - 2007 - Philosophical Topics 35 (1-2):1-18.
    When invited to consider the methodology of contemporary metaphysics, quite a number of procedures spring to mind as part of the metaphysician's toolkit. These include: eliciting and relying on intuitions; solving location problems and using “conceptual analysis”; inference to the best theory, both on internal metaphysical grounds and drawing from the theoretical reaches of the sciences; working on topics clearly close to, or even overlapping, those of other areas of inquiry using techniques of those other areas; achieving coherence with other (...)
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  30. A Scientometric Approach to the Integrated History and Philosophy of Science: Entrenched Biomedical Standardisation and Citation-Exemplar.Karen Yan, Meng-Li Tsai & Tsung-Ren Huang - 2023 - International Studies in the Philosophy of Science 36 (2):143-165.
    1. Biomedical sciences are fast-growing fields with unprecedented speed of research outputs, especially in the quantities of papers. Philosophers aiming to study ongoing biomedical changes face cha...
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  31. Hyperintensionality.Francesco Berto & Daniel Nolan - 2021 - Stanford Encyclopedia of Philosophy.
    An overview of hyperintensionality is provided. Hyperintensional languages have expressions with meanings that are more fine-grained than necessary equivalence. That is, the expressions may necessarily co-apply and yet be distinct in meaning. Adequately accounting for theories cast in hyperintensional languages is important in the philosophy of language; the philosophy of mind; metaphysics; and elsewhere. This entry presents a number of areas in which hyperintensionality is important; a range of approaches to theorising about hyperintensional matters; and a range of debates that (...)
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  32. Consequentialism and Side Constraints.Daniel Nolan - 2009 - Journal of Moral Philosophy 6 (1):5-22.
    Many people are inclined to think that consequences of actions, or perhaps reasonably expected consequences of those actions, have moral weight. Firing off shotguns in crowded areas is typically wrong, at least in part, because of the people who get maimed and killed. Committed consequentialists think that consequences (either actual consequences, or expected consequences, or intended consequences, or reasonably expected consequences, or maybe some other different shade) are all that matters, morally speaking. Lying and stealing are wrong, when they are (...)
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  33. Fictionalist Attitudes about Fictional Matters.Daniel Nolan - 2005 - In Mark Eli Kalderon (ed.), Fictionalism in Metaphysics. New York: Oxford University Press UK. pp. 204-233.
    A pressing problem for many non-realist1 theories concerning various specific subject matters is the challenge of making sense of our ordinary propositional attitude claims related to the subject in question. Famously in the case of ethics, to take one example, we have in ordinary language prima facie ascriptions of beliefs and desires involving moral properties and relationships. In the case, for instance, of “Jason believes that Kylie is virtuous”, we appear to have a belief which takes Kylie to be a (...)
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  34. Cosmic Loops.Daniel Nolan - 2018 - In Ricki Bliss & Graham Priest (eds.), Reality and its Structure: Essays in Fundamentality. Oxford, UK: Oxford University Press. pp. 91-106.
    This paper explores a special kind of loop of grounding: cosmic loops. A cosmic loop is a loop that intuitively requires us to go "around" the entire universe to come back to the original ground. After describing several kinds of cosmic loop scenarios, I will discuss what we can learn from these scenarios about constraints on grounding; the conceivability of cosmic loops; the possibility of cosmic loops; and the prospects for salvaging local reflexivity, asymmetry and transitivity of grounding in a (...)
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  35. Four Attitudes Towards Singularities in the Search for a Theory of Quantum Gravity.Karen Crowther & Sebastian De Haro - 2022 - In Antonio Vassallo (ed.), The Foundations of Spacetime Physics: Philosophical Perspectives. New York, NY: Routledge. pp. 223-250.
    Singularities in general relativity and quantum field theory are often taken not only to motivate the search for a more-fundamental theory (quantum gravity, QG), but also to characterise this new theory and shape expectations of what it is to achieve. Here, we first evaluate how particular types of singularities may suggest an incompleteness of current theories. We then classify four different 'attitudes' towards singularities in the search for QG, and show, through examples in the physics literature, that these lead to (...)
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  36. Exclusion again.Karen Bennett - 2008 - In Jakob Hohwy & Jesper Kallestrup (eds.), Being Reduced: New Essays on Reduction, Explanation, and Causation. New York: Oxford University Press. pp. 280--307.
    I think that there is an awful lot wrong with the exclusion problem. So, it seems, does just about everybody else. But of course everyone disagrees about exactly _what_ is wrong with it, and I think there is more to be said about that. So I propose to say a few more words about why the exclusion problem is not really a problem after all—at least, not for the nonreductive physicalist. The genuine _dualist_ is still in trouble. Indeed, one of (...)
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  37. (1 other version)The Dustbin Theory of Mind: A Cartesian Legacy?Lawrence Nolan & John Whipple - 2006 - Oxford Studies in Early Modern Philosophy 3:33-55.
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  38. The extent of metaphysical necessity.Daniel Nolan - 2011 - Philosophical Perspectives 25 (1):313-339.
    A lot of philosophers engage in debates about what claims are “metaphysically necessary”, and a lot more assume with little argument that some classes of claims have the status of “metaphysical necessity”. I think we can usefully replace questions about metaphysical necessity with five other questions which each capture some of what people may have had in mind when talking about metaphysical necessity. This paper explains these five other questions, and then discusses the question “how much of metaphysics is metaphysically (...)
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  39. Creeped Out.Sara Bernstein & Daniel Nolan - forthcoming - In Uriah Kriegel (ed.), Oxford Studies in Philosophy of Mind Vol 5. Oxford: Oxford University Press.
    This paper examines both creepiness and the distinctive reaction had to creepiness, being “creeped out.” The paper defends a response-dependent account of creepiness in terms of this distinctive reaction, contrasting our preferred account to others that might be offered. The paper concludes with a discussion of the value of detecting creepiness.
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  40. Inter-theory Relations in Quantum Gravity: Correspondence, Reduction and Emergence.Karen Crowther - 2018 - Studies in History and Philosophy of Science Part B: Studies in History and Philosophy of Modern Physics 63:74-85.
    Relationships between current theories, and relationships between current theories and the sought theory of quantum gravity (QG), play an essential role in motivating the need for QG, aiding the search for QG, and defining what would count as QG. Correspondence is the broad class of inter-theory relationships intended to demonstrate the necessary compatibility of two theories whose domains of validity overlap, in the overlap regions. The variety of roles that correspondence plays in the search for QG are illustrated, using examples (...)
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  41. Fearing Spouses in Aristotle's Ta Oikonomika.Daniel Nolan - 2010 - British Journal for the History of Philosophy 18 (1):1-8.
    The work which the Loeb Classical Library classifies as book 3 of the Oikonomika attributed to Aristotle is a curious piece. It has come down to us only via medieval translations into Latin. (I will be quoting the Loeb text and translation except where noted.) It is not certain that it is by Aristotle: and it is not certain whether it is even a part of the work attributed to Aristotle in ancient times. For want of a better name, let (...)
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  42. Viewing Manners Through a Wider Lens.Karen Stohr - 2016 - Dao: A Journal of Comparative Philosophy 15 (2):273-290.
    I take up reflections on my book, On Manners, by Professors Van Norden, Cline, and Olberding. In response to Professor Van Norden, I further explain and defend my employment of Kant, arguing that Kantianism offers distinctive and valuable resources for thinking about manners. I suggest similarities between Kant and Xunzi 荀子. In response to Professor Cline, I take up the question of the developmental function of manners and explore in further detail the ways in which our social roles both give (...)
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  43. Naturalised Modal Epistemology.Daniel Nolan - 2016 - In Bob Fischer & Felipe Leon (eds.), Modal Epistemology After Rationalism. Cham: Springer. pp. 7-27.
    The philosophy of necessity and possibility has flourished in the last half-century, but much less attention has been paid to the question of how we know what can be the case and what must be the case. Many friends of modal metaphysics and many enemies of modal metaphysics have agreed that while empirical discoveries can tell us what is the case, they cannot shed much light on what must be the case or on what non-actual possibilities there are. In this (...)
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  44. Reason and Freedom: Margaret Cavendish on the order and disorder of nature.Karen Detlefsen - 2007 - Archiv für Geschichte der Philosophie 89 (2):157-191.
    According to Margaret Cavendish the entire natural world is essentially rational such that everything thinks in some way or another. In this paper, I examine why Cavendish would believe that the natural world is ubiquitously rational, arguing against the usual account, which holds that she does so in order to account for the orderly production of very complex phenomena (e.g. living beings) given the limits of the mechanical philosophy. Rather, I argue, she attributes ubiquitous rationality to the natural world in (...)
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  45. Causal Counterfactuals and Impossible Worlds.Daniel Nolan - 2017 - In Helen Beebee, Christopher Hitchcock & Huw Price (eds.), Making a Difference: Essays on the Philosophy of Causation. Oxford: Oxford University Press. pp. 14-32.
    A standing challenge in the theory of counterfactuals is to solve the “deviation problem”. Consider ordinary counterfactuals involving an antecedent concerning a difference from the actual course of events at a particular time, and a consequent concerning, at least in part, what happens at a later time. In the possible worlds framework, the problem is often put in terms of which are the relevant antecedent worlds. Desiderata for the solution include that the relevant antecedent worlds be governed by the actual (...)
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  46. Utility Monsters for the Fission Age.Ray Briggs & Daniel Nolan - 2015 - Pacific Philosophical Quarterly 96 (2):392-407.
    One of the standard approaches to the metaphysics of personal identity has some counter-intuitive ethical consequences when combined with maximising consequentialism and a plausible doctrine about aggregation of consequences. This metaphysical doctrine is the so-called ‘multiple occupancy’ approach to puzzles about fission and fusion. It gives rise to a new version of the ‘utility monster’ problem, particularly difficult problems about infinite utility, and a new version of a Parfit-style ‘repugnant conclusion’. While the article focuses on maximising consequentialism for simplicity, the (...)
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  47. A semantic approach for knowledge capture of microRNA-target gene interactions.Jingshan Huang, Fernando Gutierrez, Dejing Dou, Judith A. Blake, Karen Eilbeck, Darren A. Natale, Barry Smith, Yu Lin, Xiaowei Wang & Zixing Liu - 2015 - In Jingshan Huang, Fernando Gutierrez, Dejing Dou, Judith A. Blake, Karen Eilbeck, Darren A. Natale, Barry Smith, Yu Lin, Xiaowei Wang & Zixing Liu (eds.), IEEE International Conference on Bioinformatics and Biomedicine (IEEE BIBM 2015),. pp. 975-982.
    Research has indicated that microRNAs (miRNAs), a special class of non-coding RNAs (ncRNAs), can perform important roles in different biological and pathological processes. miRNAs’ functions are realized by regulating their respective target genes (targets). It is thus critical to identify and analyze miRNA-target interactions for a better understanding and delineation of miRNAs’ functions. However, conventional knowledge discovery and acquisition methods have many limitations. Fortunately, semantic technologies that are based on domain ontologies can render great assistance in this regard. In our (...)
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  48. Kantian Beneficence and the Problem of Obligatory Aid.Karen Stohr - 2011 - Journal of Moral Philosophy 8 (1):45-67.
    Common sense tells us that in certain circumstances, helping someone is morally obligatory. That intuition appears incompatible with Kant's account of beneficence as a wide imperfect duty, and its implication that agents may exercise latitude over which beneficent actions to perform. In this paper, I offer a resolution to the problem from which it follows that some opportunities to help admit latitude and others do not. I argue that beneficence has two components: the familiar wide duty to help others achieve (...)
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  49. (1 other version)Atomism, Monism, and Causation in the Natural Philosophy of Margaret Cavendish.Karen Detlefsen - 2006 - Oxford Studies in Early Modern Philosophy 3:199-240.
    Between 1653 and 1655 Margaret Cavendish makes a radical transition in her theory of matter, rejecting her earlier atomism in favour of an infinitely-extended and infinitely-divisible material plenum, with matter being ubiquitously self-moving, sensing, and rational. It is unclear, however, if Cavendish can actually dispense of atomism. One of her arguments against atomism, for example, depends upon the created world being harmonious and orderly, a premise Cavendish herself repeatedly undermines by noting nature’s many disorders. I argue that her supposed difficulties (...)
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  50. Protein Ontology: Enhancing and scaling up the representation of protein entities.Darren A. Natale, Cecilia N. Arighi, Judith A. Blake, Jonathan Bona, Chuming Chen, Sheng-Chih Chen, Karen R. Christie, Julie Cowart, Peter D'Eustachio, Alexander D. Diehl, Harold J. Drabkin, William D. Duncan, Hongzhan Huang, Jia Ren, Karen Ross & Alan Ruttenberg - 2017 - Nucleic Acids Research 45 (D1):D339-D346.
    The Protein Ontology (PRO; http://purl.obolibrary.org/obo/pr) formally defines and describes taxon-specific and taxon-neutral protein-related entities in three major areas: proteins related by evolution; proteins produced from a given gene; and protein-containing complexes. PRO thus serves as a tool for referencing protein entities at any level of specificity. To enhance this ability, and to facilitate the comparison of such entities described in different resources, we developed a standardized representation of proteoforms using UniProtKB as a sequence reference and PSI-MOD as a post-translational modification (...)
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