Results for 'Oliver He'

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  1. CIDO, a Community-Based Ontology for Coronavirus Disease Knowledge and Data Integration, Sharing, and Analysis.Oliver He, John Beverley, Gilbert S. Omenn, Barry Smith, Brian Athey, Luonan Chen, Xiaolin Yang, Junguk Hur, Hsin-hui Huang, Anthony Huffman, Yingtong Liu, Yang Wang, Edison Ong & Hong Yu - 2020 - Scientific Data 181 (7):5.
    Ontologies, as the term is used in informatics, are structured vocabularies comprised of human- and computer-interpretable terms and relations that represent entities and relationships. Within informatics fields, ontologies play an important role in knowledge and data standardization, representation, integra- tion, sharing and analysis. They have also become a foundation of artificial intelligence (AI) research. In what follows, we outline the Coronavirus Infectious Disease Ontology (CIDO), which covers multiple areas in the domain of coronavirus diseases, including etiology, transmission, epidemiology, pathogenesis, diagnosis, (...)
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  2. CTO: A Community-Based Clinical Trial Ontology and Its Applications in PubChemRDF and SCAIViewH.Asiyah Yu Lin, Stephan Gebel, Qingliang Leon Li, Sumit Madan, Johannes Darms, Evan Bolton, Barry Smith, Martin Hofmann-Apitius, Yongqun Oliver He & Alpha Tom Kodamullil - 2021 - Proceedings of the 11th International Conference on Biomedical Ontologies (ICBO) and 10th Workshop on Ontologies and Data in Life Sciences (ODLS).
    Driven by the use cases of PubChemRDF and SCAIView, we have developed a first community-based clinical trial ontology (CTO) by following the OBO Foundry principles. CTO uses the Basic Formal Ontology (BFO) as the top level ontology and reuses many terms from existing ontologies. CTO has also defined many clinical trial-specific terms. The general CTO design pattern is based on the PICO framework together with two applications. First, the PubChemRDF use case demonstrates how a drug Gleevec is linked to multiple (...)
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  3. On H. M. Oliver’s “Established Expectations and American Economic Policies”.Govind Persad - 2015 - Ethics 125 (3):829-832,.
    In this retrospective for Ethics, I discuss H.M. Oliver’s “Established Expectations and American Economic Policies.” This article, by a then-modestly-famous economist, has been ignored (no citations) since its 1940 publication. Yet it bears directly on a normative problem at the intersection of ethics and economics that challenges today’s policymakers but has received comparatively little philosophical attention: how should we balance potentially desirable institutional change against the disruption of established expectations? -/- Oliver details how the principle of fulfilling established (...)
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  4.  70
    Chemical Arbitrariness and the Causal Role of Molecular Adapters.Oliver M. Lean - 2019 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 78:101180.
    Jacques Monod (1971) argued that certain molecular processes rely critically on the property of chemical arbitrariness, which he claimed allows those processes to “transcend the laws of chemistry”. It seems natural, as some philosophers have done, to interpret this in modal terms: a biological relationship is chemically arbitrary if it is possible, within the constraints of chemical “law”, for that relationship to have been otherwise than it is. But while modality is certainly important for understanding chemical arbitrariness, understanding its biological (...)
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  5. Is Spinoza’s Theory of Finite Mind Coherent? – Death, Affectivity and Epistemology in the Ethics.Oliver Istvan Toth - 2017 - The Concept of Affectivity in Early Modern Philosophy.
    In this paper I examine the question whether Spinoza can account for the necessity of death. I argue that he cannot because within his ethical intellectualist system the subject cannot understand the cause of her death, since by understanding it renders it harmless. Then, I argue that Spinoza could not solve this difficulties because of deeper commitments of his system. At the end I draw a historical parallel to the problem from medieval philosophy.
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  6. The Problem of Universals and the Asymmetry of Instantiation.Donald L. M. Baxter - 2018 - American Philosophical Quarterly 55 (2):189-202.
    Oliver's and Rodriguez-Pereyra's important interpretation of the problem of universals as one concerning truthmakers neglects something crucial: that there is a numerical identity between numerically distinct particulars. The problem of universals is rather how to resolve the apparent contradiction that the same things are both numerically distinct and numerically identical. Baxter's account of instantiation as partial identity resolves the apparent contradiction. A seeming objection to this account is that it appears to make instantiation symmetric, since partial identity is symmetric. (...)
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  7. The Nihilist.Raff Donelson - 2019 - In Seth Vannatta (ed.), The Pragmatism and Prejudice of Oliver Wendell Holmes Jr. pp. 31-47.
    Scattered skeptical remarks and a general austerity that infused his writings have given Justice Oliver Wendell Holmes a reputation as some type of nihilist. Noted commentators such as Richard Posner and Albert Alschuler have claimed as much. This article seeks to correct this misunderstanding. Holmes was not a nihilist in the sense of being melancholy due to a belief that the world has no absolute moral values or gods. Instead, Holmes was a pragmatist in the spirit of William James (...)
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  8. Legal Fallibilism: Law (Like Science) as a Form of Community Inquiry.Frederic R. Kellogg - 2009 - Discipline Filosofiche 19 (2).
    Fallibilism, as a fundamental aspect of pragmatic epistemology, can be illuminated by a study of law. Before he became a famous American judge, Oliver Wendell Holmes, Jr., along with his friends William James and Charles Sanders Peirce, associated as presumptive members of the Metaphysical Club of Cambridge in the 1870s, recalled as the birthplace of pragmatism. As a young scholar, Holmes advanced a concept of legal fallibilism as incremental community inquiry. In this early work, I suggest that Holmes treats (...)
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  9.  9
    Oliver and Smiley on the Collective–Distributive Opposition.Gustavo Picazo - 2022 - Logos and Episteme 13 (2):201-205.
    Two objections are raised against Oliver and Smiley’s analysis of the collective–distributive opposition in their 2016 book: They take it as a basic premise that the collective reading of ‘baked a cake’ corresponds to a predicate different from its distributive reading, and the same applies to all predicate expressions that admit both a collective and a distributive interpretation. At the same time, however, they argue that inflectional forms of the same lexeme reveal a univocity that should be preserved in (...)
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  10. Against Mereological Panentheism.Oliver D. Crisp - 2019 - European Journal for Philosophy of Religion 11 (2):23-41.
    In this paper I offer an argument against one important version of panentheism, that is, mereological panentheism. Although panentheism has proven difficult to define, I provide a working definition of the view, and proceed to argue that given this way of thinking about the doctrine, mereological accounts of panentheism have serious theological drawbacks. I then explore some of these theological drawbacks. In a concluding section I give some reasons for thinking that the classical theistic alternative to panentheism is preferable, all (...)
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  11. On the Mathematics and Metaphysics of the Hole Argument.Oliver Pooley & James Read - forthcoming - The British Journal for the Philosophy of Science.
    We make some remarks on the mathematics and metaphysics of the hole argument, in response to a recent article in this journal by Weatherall ([2018]). Broadly speaking, we defend the mainstream philosophical literature from the claim that correct usage of the mathematics of general relativity `blocks' the argument.
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  12. The Hole Argument.Oliver Pooley - forthcoming - In Eleanor Knox & Alastair Wilson (eds.), The Routledge Companion to the Philosophy of Physics. Routledge.
    This paper reviews the hole argument as an argument against spacetime substantivalism. After a careful presentation of the argument itself, I critically review possible responses.
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  13. Infinite Regresses of Justification.Oliver Black - 1988 - International Philosophical Quarterly 28 (4):421-437.
    This paper uses a schema for infinite regress arguments to provide a solution to the problem of the infinite regress of justification. The solution turns on the falsity of two claims: that a belief is justified only if some belief is a reason for it, and that the reason relation is transitive.
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  14.  65
    Binding Specificity and Causal Selection in Drug Design.Oliver M. Lean - 2020 - Philosophy of Science 87 (1):70-90.
    Binding specificity is a centrally important concept in molecular biology, yet it has received little philosophical attention. Here I aim to remedy this by analyzing binding specificity as a causal property. I focus on the concept’s role in drug design, where it is highly prized and hence directly studied. From a causal perspective, understanding why binding specificity is a valuable property of drugs contributes to an understanding of causal selection—of how and why scientists distinguish between causes, not just causes from (...)
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  15.  91
    Digital Literature Analysis for Empirical Philosophy of Science.Oliver M. Lean, Luca Rivelli & Charles H. Pence - 2021 - British Journal for the Philosophy of Science.
    Empirical philosophers of science aim to base their philosophical theories on observations of scientific practice. But since there is far too much science to observe it all, how can we form and test hypotheses about science that are sufficiently rigorous and broad in scope, while avoiding the pitfalls of bias and subjectivity in our methods? Part of the answer, we claim, lies in the computational tools of the digital humanities, which allow us to analyze large volumes of scientific literature. Here (...)
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  16. Morality is Fundamentally an Evolved Solution to Problems of Social Cooperation.Oliver Curry & Mark Alfano - forthcoming - Critique of Anthropology.
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  17.  38
    "He Is My Wife", Veto Adoption: A Moral Rightful Dissent.Pouya Lotfi Yazdi - manuscript
    I (Hereafter: the writer) think that arguing against the LGBTQ+ adoption right is similar to a battle. On the one side, some proponents would recognize opponents' beliefs as a chain of LGBTQ+ rights, on the other side, opponents insist that they have to punish LGBTQ+ because of this right. The writer disagrees with both camps and will propose this claim as the Gay Adoption Disrespect Argument.
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  18. He/She/They/Ze.Robin Dembroff & Daniel Wodak - 2018 - Ergo: An Open Access Journal of Philosophy 5.
    In this paper, we defend two main claims. The first is a moderate claim: we have a negative duty to not use binary gender-specific pronouns he or she to refer to genderqueer individuals. We defend this with an argument by analogy. It was gravely wrong for Mark Latham to refer to Catherine McGregor, a transgender woman, using the pronoun he; we argue that such cases of misgendering are morally analogous to referring to Angel Haze, who identifies as genderqueer, as he (...)
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  19. Radicalizing Radical Negativity: On Oliver Marchart’s Thinking Antagonism.Dimitris Vardoulakis - 2020 - Etica & Politica / Ethics & Politics 3 (22):581-605.
    Oliver Marchart constructs an elaborate ontologization of the political that builds on theories developed by the Essex School while relying on Heideggerianism and Hegelianism. This original thought is a powerful and convincing attempt to think the ontology of the political without lapsing into a celebration of essentialist grounding or complete groundlessness, which are equally metaphysical and mutually supporting positions. Tensions arise within Marchart’s own thought when the notion of instrumentality appears to be inscribed solely on the side of politics (...)
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  20. James Beilby. Naturalism Defeated? Essays on Plantinga’s Evolutionary Argument Against Naturalism. Cornell University Press, 2002.Wiertz Oliver - 2010 - European Journal for Philosophy of Religion 2 (1):222--226.
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  21.  80
    State Consciousness - Two Defective Arguments.Oliver Kauffmann - 2006 - In H. B. Andersen, F. V. Christiansen, K. F. Jørgensen & Vincent Hendriccks (eds.), The Way Through Science and Philosophy: Essays in Honour of Stig Andur Pedersen. London: College Publications. pp. 243-356.
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  22. Inherence of False Beliefs in Spinoza’s Ethics.Oliver Istvan Toth - 2016 - Society and Politics 10 (2):74-94.
    In this paper I argue, based on a comparison of Spinoza's and Descartes‟s discussion of error, that beliefs are affirmations of the content of imagination that is not false in itself, only in relation to the object. This interpretation is an improvement both on the winning ideas reading and on the interpretation reading of beliefs. Contrary to the winning ideas reading it is able to explain belief revision concerning the same representation. Also, it does not need the assumption that I (...)
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  23. Legal Validity and the Infinite Regress.Oliver Black - 1996 - Law and Philosophy 15 (4):339 - 368.
    The following four theses all have some intuitive appeal: (I) There are valid norms. (II) A norm is valid only if justified by a valid norm. (III) Justification, on the class of norms, has an irreflexive proper ancestral. (IV) There is no infinite sequence of valid norms each of which is justified by its successor. However, at least one must be false, for (I)--(III) together entail the denial of (IV). There is thus a conflict between intuition and logical possibility. This (...)
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  24.  96
    Irreal Temporality: André Aciman and a New Theory of Time.Oliver Iskandar Banks - 2021 - Broad Street Humanities Review 1 (5):1-15.
    This article argues that we can construct a complex interpretation of the nature of time by linking Aciman’s gnostic thread to aspects of twentieth century theory, from philosophy and psychoanalysis. In brief, it attempts to demonstrate the roles of dislocation, deferral, and Otherness in constituting human temporality. The essay begins by surmising the conceptual history of time, touching on key ideas put forward by Augustine and Bergson. The second section takes a psychoanalytic turn after exploring Homo Irrealis to describe the (...)
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  25. Ibn Miskawayh, Ahmad Ibn Muhammad (C.940-1030).Oliver Leaman - unknown - Routledge Encyclopedia of Philosophy.
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  26. Faces of Feminism a Study of Feminism as a Social Movement.Olive Banks - 1981 - Wiley-Blackwell.
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  27. Natural Hazards Under Climate Change Conditions: A Case Study of Expectations and Their Normative Significance in Protecting Alpine Communities.Thomas Pölzler, Florian Ortner, Lukas Meyer, Oliver Sass & Miriam Hofer - 2022 - Natural Hazards Review 2 (23):1-15.
    Climate change increases the frequency and intensity of certain kinds of natural hazard events in alpine areas. This interdisciplinary study addresses the hypothetical possibility of relocating the residents of three alpine areas in Austria: the Sölk valleys, the Johnsbach valley, and the St. Lorenzen/Schwarzenbach valleys. Our particular focus is on these residents’ expectations about such relocations. We find that (1) many residents expect that in the next decades the state will provide them with a level of natural hazards protection, aid, (...)
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  28.  22
    A Defense of Reconstructivism.Oliver Toth - 2022 - Hungarian Review of Philosophy:51-68.
    The immediate occasion for this special issue was Christia Mercer’s influential paper “The Contextualist Revolution in Early Modern Philosophy”. In her paper, Mercer clearly demarcates two methodologies of the history of early modern philosophy. She argues that there has been a silent contextualist revolution in the past decades, and the reconstructivist methodology has been abandoned. One can easily get the impression that ‘reconstructivist’ has become a pejorative label that everyone outright rejects. Mercer’s examples of reconstructivist historians of philosophy are deceased (...)
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  29. A Fresh Look on the Role of the Second Kind of Knowledge in Spinoza’s Ethics.Oliver Istvan Toth - 2017 - Hungarian Philosophical Review (2):37-56.
    In this paper, through a close reading of Spinoza's use of common notions I argue for the role of experiential and experimental knowledge in Spinoza's epistemology.
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  30. The Supplement at the… Sau(R)Ce: On Jamie Oliver’s Global Brand Identity.George Rossolatos - 2019 - Journal of Place Branding and Public Diplomacy 1:1-17.
    Amidst the constantly augmenting gastronomic capital of celebrity chefs, this study scrutinizes from a critical discourse analytic angle how Jamie Oliver has managed to carve a global brand identity through a process that is termed (dis)placed branding. A roadmap is furnished as to how Italy as place brand and Italianness are discursively articulated, (dis)placed and appropriated in Jamie Oliver’s travelogues which are reflected in his global brand identity. By enriching the CDA methodological toolbox with a deconstructive reading strategy, (...)
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  31. A Toothful of Concepts: Towards a Theory of Weighted Concept Combination.Daniele Porello, Oliver Kutz, Guendalina Righetti, Nicolas Troquard, Pietro Galliani & Claudio Masolo - 2019 - In Mantas Simkus & Grant E. Weddell (eds.), Proceedings of the 32nd International Workshop on Description Logics, Oslo, Norway, June 18-21, 2019.
    We introduce a family of operators to combine Description Logic concepts. They aim to characterise complex concepts that apply to instances that satisfy \enough" of the concept descriptions given. For instance, an individual might not have any tusks, but still be considered an elephant. To formalise the meaning of "enough", the operators take a list of weighted concepts as arguments, and a certain threshold to be met. We commence a study of the formal properties of these operators, and study some (...)
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  32. Education for Citizenship: Moral Obligations.Okafor Oliver Anowor - 1992 - Cecta.
    The way we answer the question, .what ought I to do?. goes to show what we believe about our life and the way to live that life. However we answer the question .what ought I to do?., we are prescribing a mode of -/- action and this action has a direct bearing on other people and our society at large. So the moral question has a direct connection with what society becomes. If we answer rightly then the impact on our (...)
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  33.  20
    Pink Panthers and Toothless Tigers: Three Problems in Classification.Guendalina Righetti, Daniele Porello, Oliver Kutz, Nicolas Troquard & Claudio Masolo - 2019 - In Proceedings of the 7th International Workshop on Artificial Intelligence and Cognition, Manchester, UK, September 10-11, 2019. {CEUR} Workshop Proceedings 2483. pp. 39-53.
    Many aspects of how humans form and combine concepts are notoriously difficult to capture formally. In this paper, we focus on the representation of three particular such aspects, namely overexten- sion, underextension, and dominance. Inspired in part by the work of Hampton, we consider concepts as given through a prototype view, and by considering the interdependencies between the attributes that define a concept. To approach this formally, we employ a recently introduced family of operators that enrich Description Logic languages. These (...)
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  34. Generalization Bias in Science.Uwe Peters, Alexander Krauss & Oliver Braganza - 2022 - Cognitive Science 1 (9).
    Many scientists routinely generalize from study samples to larger populations. It is commonly assumed that this cognitive process of scientific induction is a voluntary inference in which researchers assess the generalizability of their data and then draw conclusions accordingly. Here we challenge this view and argue for a novel account. The account describes scientific induction as involving by default a generalization bias that operates automatically and frequently leads researchers to unintentionally generalize their findings without sufficient evidence. The result is unwarranted, (...)
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  35. Memory, Recollection and Consciousness in Spinoza's Ethics.Oliver Toth - 2018 - Society and Politics 12 (2):50-71.
    Spinoza’s account of memory has not received enough attention, even though it is relevant for his theory of consciousness. Recent literature has studied the “pancreas problem.” This paper argues that there is an analogous problem for memories: if memories are in the mind, why is the mind not conscious of them? I argue that Spinoza’s account of memory can be better reconstructed in the context of Descartes’s account to show that Spinoza responded to these views. Descartes accounted for the preservation (...)
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  36.  44
    Perceptron Connectives in Knowledge Representation.Pietro Galliani, Guendalina Righetti, Daniele Porello, Oliver Kutz & Nicolas Toquard - 2020 - In Knowledge Engineering and Knowledge Management - 22nd International Conference, {EKAW} 2020, Bolzano, Italy, September 16-20, 2020, Proceedings. Lecture Notes in Computer Science 12387. pp. 183-193.
    We discuss the role of perceptron (or threshold) connectives in the context of Description Logic, and in particular their possible use as a bridge between statistical learning of models from data and logical reasoning over knowledge bases. We prove that such connectives can be added to the language of most forms of Description Logic without increasing the complexity of the corresponding inference problem. We show, with a practical example over the Gene Ontology, how even simple instances of perceptron connectives are (...)
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  37. Spinoza's Theory of Intellect – an Averroistic Theory?Oliver Istvan Toth - 2020 - In Averroism between the 15th and 17th century. pp. 281-309.
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  38. Rape as Spectator Sport and Creepshot Entertainment: Social Media and the Valorization of Lack of Consent.Kelly Oliver - 2015 - American Studies Journal (10):1-16.
    Lack of consent is valorized within popular culture to the point that sexual assault has become a spectator sport and creepshot entertainment on social media. Indeed, the valorization of nonconsensual sex has reached the extreme where sex with unconscious girls, especially accompanied by photographs as trophies, has become a goal of some boys and men.
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  39. The “She Said, He Said” Paradox and the Proof Paradox.Georgi Gardiner - forthcoming - In Zachary Hoskins and Jon Robson (ed.), Truth and Trial.
    This essay introduces the ‘she said, he said’ paradox for Title IX investigations. ‘She said, he said’ cases are accusations of rape, followed by denials, with no further significant case-specific evidence available to the evaluator. In such cases, usually the accusation is true. Title IX investigations adjudicate sexual misconduct accusations in US educational institutions; I address whether they should be governed by the ‘preponderance of the evidence’ standard of proof or the higher ‘clear and convincing evidence’ standard. -/- Orthodoxy holds (...)
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  40.  61
    Asymmetric Hybrids: Dialogues for Computational Concept Combination.Guendalina Righetti, Daniele Porello, Nicolas Troquard, Oliver Kutz, Maria Hedblom & Pietro Galliani - 2022 - In Fabian Neuhaus & Boyan Brodaric (eds.), Formal Ontology in Information Systems - Proceedings of the Twelfth International Conference, {FOIS} 2021, Bozen-Bolzano, Italy, September 11-18, 2021. Frontiers in Artificial Intelligence and Applications. IOS Press. pp. 81-96.
    When people combine concepts these are often characterised as “hybrid”, “impossible”, or “humorous”. However, when simply considering them in terms of extensional logic, the novel concepts understood as a conjunctive concept will often lack meaning having an empty extension (consider “a tooth that is a chair”, “a pet flower”, etc.). Still, people use different strategies to produce new non-empty concepts: additive or integrative combination of features, alignment of features, instantiation, etc. All these strategies involve the ability to deal with conflicting (...)
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  41.  24
    Doth He Protest Too Much? Thoughts on Matthew’s Black Devaluation Thesis.Michael Merry - forthcoming - Dialogue: Canadian Philosophical Review.
    I am broadly sympathetic to Dale Matthew’s analysis concerning phenotypic devaluation and disadvantage. However, in what follows, I restrict my remarks to a few areas where I think he either lacks empirical precision, or overstates his case.
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  42. OAE: The Ontology of Adverse Events.Yongqun He, Sirarat Sarntivijai, Yu Lin, Zuoshuang Xiang, Abra Guo, Shelley Zhang, Desikan Jagannathan, Luca Toldo, Cui Tao & Barry Smith - 2014 - Journal of Biomedical Semantics 5 (29):1-13.
    A medical intervention is a medical procedure or application intended to relieve or prevent illness or injury. Examples of medical interventions include vaccination and drug administration. After a medical intervention, adverse events (AEs) may occur which lie outside the intended consequences of the intervention. The representation and analysis of AEs are critical to the improvement of public health. Description: The Ontology of Adverse Events (OAE), previously named Adverse Event Ontology (AEO), is a community-driven ontology developed to standardize and integrate data (...)
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  43. Because He Thought He Had Insulted Him.Adam Morton - 1975 - Journal of Philosophy 72 (1):5-15.
    I compare our idioms for quantifying into belief contexts to our idioms for quantifying into intention contexts. The latter is complicated by the fact that there is always a discrepancy between the action as intended and the action as performed. The article contains - this is written long after it appeared - an early version of a tracking or sensitivity analysis of the relation between a thought and its object.
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  44. Writing the Austrian Traditions: Relations Between Philosophy and Literature, Edmonton:.Wolfgang Huemer & Marc-Oliver Schuster (eds.) - 2003 - University of Alberta Press.
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  45. Does Global Business Have a Responsibility to Promote Just Institutions?Nien-hê Hsieh - 2009 - Business Ethics Quarterly 19 (2):251-273.
    Drawing upon John Rawls’s framework in The Law of Peoples, this paper argues that MNEs have a responsibility to promote well-ordered social and political institutions in host countries that lack them. This responsibility is grounded in a negative duty not to cause harm. In addition to addressing the objection that promoting well-ordered institutions represents unjustified interference by MNEs, the paper provides guidance for managers of MNEs operating in host countries that lack just institutions. The paper argues for understanding corporate responsibility (...)
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  46. Promoting Coherent Minimum Reporting Guidelines for Biological and Biomedical Investigations: The MIBBI Project.Chris F. Taylor, Dawn Field, Susanna-Assunta Sansone, Jan Aerts, Rolf Apweiler, Michael Ashburner, Catherine A. Ball, Pierre-Alain Binz, Molly Bogue, Tim Booth, Alvis Brazma, Ryan R. Brinkman, Adam Michael Clark, Eric W. Deutsch, Oliver Fiehn, Jennifer Fostel, Peter Ghazal, Frank Gibson, Tanya Gray, Graeme Grimes, John M. Hancock, Nigel W. Hardy, Henning Hermjakob, Randall K. Julian, Matthew Kane, Carsten Kettner, Christopher Kinsinger, Eugene Kolker, Martin Kuiper, Nicolas Le Novere, Jim Leebens-Mack, Suzanna E. Lewis, Phillip Lord, Ann-Marie Mallon, Nishanth Marthandan, Hiroshi Masuya, Ruth McNally, Alexander Mehrle, Norman Morrison, Sandra Orchard, John Quackenbush, James M. Reecy, Donald G. Robertson, Philippe Rocca-Serra, Henry Rodriguez, Heiko Rosenfelder, Javier Santoyo-Lopez, Richard H. Scheuermann, Daniel Schober, Barry Smith & Jason Snape - 2008 - Nature Biotechnology 26 (8):889-896.
    Throughout the biological and biomedical sciences there is a growing need for, prescriptive ‘minimum information’ (MI) checklists specifying the key information to include when reporting experimental results are beginning to find favor with experimentalists, analysts, publishers and funders alike. Such checklists aim to ensure that methods, data, analyses and results are described to a level sufficient to support the unambiguous interpretation, sophisticated search, reanalysis and experimental corroboration and reuse of data sets, facilitating the extraction of maximum value from data sets (...)
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  47.  35
    Towards Knowledge-Driven Distillation and Explanation of Black-Box Models.Roberto Confalonieri, Guendalina Righetti, Pietro Galliani, Nicolas Toquard, Oliver Kutz & Daniele Porello - 2021 - In Proceedings of the Workshop on Data meets Applied Ontologies in Explainable {AI} {(DAO-XAI} 2021) part of Bratislava Knowledge September {(BAKS} 2021), Bratislava, Slovakia, September 18th to 19th, 2021. CEUR 2998.
    We introduce and discuss a knowledge-driven distillation approach to explaining black-box models by means of two kinds of interpretable models. The first is perceptron (or threshold) connectives, which enrich knowledge representation languages such as Description Logics with linear operators that serve as a bridge between statistical learning and logical reasoning. The second is Trepan Reloaded, an ap- proach that builds post-hoc explanations of black-box classifiers in the form of decision trees enhanced by domain knowledge. Our aim is, firstly, to target (...)
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  48.  23
    Concept Combination in Weighted Logic.Guendalina Righetti, Claudio Masolo, Nicolas Toquard, Oliver Kutz & Daniele Porello - 2021 - In Proceedings of the Joint Ontology Workshops 2021 Episode {VII:} The Bolzano Summer of Knowledge co-located with the 12th International Conference on Formal Ontology in Information Systems {(FOIS} 2021), and the 12th Internati.
    We present an algorithm for concept combination inspired and informed by the research in cognitive and experimental psychology. Dealing with concept combination requires, from a symbolic AI perspective, to cope with competitive needs: the need for compositionality and the need to account for typicality effects. Building on our previous work on weighted logic, the proposed algorithm can be seen as a step towards the management of both these needs. More precisely, following a proposal of Hampton [1], it combines two weighted (...)
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  49. Two Approaches to Ontology Aggregation Based on Axiom Weakening.Daniele Porello, Nicolaas Troquard, Oliver Kutz, Rafael Penaloza, Roberto Confalonieri & Pietro Galliani - 2018 - In Proceedings of the Twenty-Seventh International Joint Conference on Artificial Intelligence, {IJCAI} 2018, July 13-19, 2018, Stockholm, Sweden. pp. 1942--1948.
    Axiom weakening is a novel technique that allows for fine-grained repair of inconsistent ontologies. In a multi-agent setting, integrating ontologies corresponding to multiple agents may lead to inconsistencies. Such inconsistencies can be resolved after the integrated ontology has been built, or their generation can be prevented during ontology generation. We implement and compare these two approaches. First, we study how to repair an inconsistent ontology resulting from a voting-based aggregation of views of heterogeneous agents. Second, we prevent the generation of (...)
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  50.  13
    Reconstructivism Not Dead. Introduction.Judit Szalai & Oliver Toth - 2022 - Hungarian Review of Philosophy:5-8.
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