Results for 'Mark Musen'

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  1. Towards Interoperability of Biomedical Ontologies.Musen Mark, A. Schroeder, Michael Smith & Barry - 2008 - Schloss Dagstuhl: Leibniz-Zentrum für Informatik.
    Report on Dagstuhl Seminar 07132, Schloss Dagstuhl, March 27-30 , 2007.
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  2. The National Center for Biomedical Ontology.Mark A. Musen, Natalya F. Noy, Nigam H. Shah, Patricia L. Whetzel, Christopher G. Chute, Margaret-Anne Story & Barry Smith - 2012 - Journal of the American Medical Informatics Association 19 (2):190-195.
    The National Center for Biomedical Ontology is now in its seventh year. The goals of this National Center for Biomedical Computing are to: create and maintain a repository of biomedical ontologies and terminologies; build tools and web services to enable the use of ontologies and terminologies in clinical and translational research; educate their trainees and the scientific community broadly about biomedical ontology and ontology-based technology and best practices; and collaborate with a variety of groups who develop and use ontologies and (...)
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  3. Towards Interoperability of Biomedical Ontologies - Report Number 07132.Mark Musen, Michael Schroeder & Barry Smith - 2008 - In Musen Mark, A. Schroeder, Michael Smith & Barry (eds.), Towards Interoperability of Biomedical Ontologies. Schloss Dagstuhl: Leibniz-Zentrum für Informatik.
    The meeting focused on uses of ontologies, with a special focus on spatial ontologies, in addressing the ever increasing needs faced by biology and medicine to cope with ever expanding quantities of data. To provide effective solutions computers need to integrate data deriving from myriad heterogeneous sources by bringing the data together within a single framework. The meeting brought together leaders in the field of what are called "top-level ontologies" to address this issue, and to establish strategies among leaders in (...)
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  4. Applied ontology: Focusing on content.Nicola Guarino & Mark A. Musen - 2005 - Applied ontology 1 (1):1-5.
    In a world that is overflowing with journals and other outlets for scientific publication, the appearance of any new periodical requires some justification. There are already more journals than we can read and more conferences than we can attend. In the case of applied Ontology, we believe that the creation of anew journal not only is completely justifiable, it is downright exciting. For too long, workers in computer science have assumed that content comes for free. “Theory” in computer science has (...)
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  5. Ontology Summit 2008 Communiqué: Towards an open ontology repository.Leo Obrst, Mark Musen, Barry Smith, Fabian Neuhaus, Frank Olken, Mike Gruninger, M. Raymond, Patrick Hayes & Raj Sharma - 2008 - In Leo Obrst, Mark Musen, Barry Smith, Fabian Neuhaus, Frank Olken, Mike Gruninger, M. Raymond, Patrick Hayes & Raj Sharma (eds.), Ontology Summit 2008 Communiqué: Towards an open ontology repository. cim3. net.
    Each annual Ontology Summit initiative makes a statement appropriate to each Summit’s theme as part of our general advocacy designed to bring ontology science and engineering into the mainstream. The theme this year is "Towards an Open Ontology Repository". This communiqué represents the joint position of those who were engaged in the year's summit discourse on an Open Ontology Repository (OOR) and of those who endorse below. In this discussion, we have agreed that an "ontology repository is a facility where (...)
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  6. Ten years of Applied Ontology.Nicola Guarino & Mark A. Musen - 2015 - Applied ontology 10 (3-4):169-170.
    This is a short editorial to introduce the double issue of Applied Ontology that celebrates the journal's tenth anniversary. At a time when information technology of all kinds depends on the use of explicit ontologies, our journal addresses the modeling issues that underlie the next generation of computational systems. As the editors of Applied Ontology, we are excited by how far we have come in the past decade and by the opportunities that await our research community.
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  7. ARGOS policy brief on semantic interoperability.Dipak Kalra, Mark Musen, Barry Smith & Werner Ceusters - 2011 - Studies in Health Technology and Informatics 170 (1):1-15.
    Semantic interoperability requires the use of standards, not only for Electronic Health Record (EHR) data to be transferred and structurally mapped into a receiving repository, but also for the clinical content of the EHR to be interpreted in conformity with the original meanings intended by its authors. Accurate and complete clinical documentation, faithful to the patient’s situation, and interoperability between systems, require widespread and dependable access to published and maintained collections of coherent and quality-assured semantic resources, including models such as (...)
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  8. Bioportal: Ontologies and integrated data resources at the click of the mouse.L. Whetzel Patricia, H. Shah Nigam, F. Noy Natalya, Dai Benjamin, Dorf Michael, Griffith Nicholas, Jonquet Clement, Youn Cherie, Callendar Chris, Coulet Adrien, Barry Smith, Chris Chute & Mark Musen - 2011 - In Whetzel Patricia L., Shah Nigam H., Noy Natalya F., Benjamin Dai, Michael Dorf, Nicholas Griffith, Clement Jonquet, Cherie Youn, Chris Callendar, Adrien Coulet, Smith Barry, Chute Chris & Musen Mark (eds.), Proceedings of the 2nd International Conference on Biomedical Ontology, Buffalo, NY. pp. 292-293.
    BioPortal is a Web portal that provides access to a library of biomedical ontologies and terminologies developed in OWL, RDF(S), OBO format, Protégé frames, and Rich Release Format. BioPortal functionality, driven by a service-oriented architecture, includes the ability to browse, search and visualize ontologies (Figure 1). The Web interface also facilitates community-based participation in the evaluation and evolution of ontology content.
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  9. The Selected Writings of Mark Pettinelli.Mark Pettinelli - manuscript
    The best writing of Mark Pettinelli, about cognitive psychology, cognitive science, etc.
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  10. (A Little) Quantified Modal Logic for Normativists.Mark Povich - forthcoming - Analysis.
    Burgess (1997), building on Quine (1953), convincingly argued that claims in quantified modal logic cannot be understood as synonymous with or logically equivalent to claims about the analyticity of certain sentences. According to modal normativism, metaphysically necessary claims instead express or convey our actual semantic rules. In this paper, I show how the normativist can use Sidelle’s (1992a, 1995) neglected work on rigidity to account for two important phenomena in quantified modal logic: the necessity of identity and the substitutivity of (...)
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  11.  87
    Chapter 5 Skeptical-Dogmatism and the Self-Undermining Objection.Mark Walker - 2024 - In Outlines of skeptical-dogmatism: on disbelieving our philosophical views. Lanham: Lexington Books.
    This chapter puts to rest for all of eternity the self-undermining charge against conciliationism.
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  12. Narrative and Personal Identity.Mark Schroeder - 2022 - Aristotelian Society Supplementary Volume 96 (1):209-226.
    In this paper I explore how and why personal identity might be essentially narrative in nature. My topic is the question of personal identity in the strict sense of identity—the question of which person you are, and how that person is extended in space, time, and quality. In this my question appears to contrast with the question of personal identity in the sense sought by teenagers and sufferers of mid-life crises who are trying to ‘find themselves’. But in fact it (...)
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  13. The liberal conception of free speech and its limits.Mark R. Reiff - forthcoming - Jurisprudence.
    Unfortunately, many people today see the regulation of lies, disinformation, hate speech, and fake news as an infringement of free speech, at least when such speech is ‘political,’ despite the damage that such speech can do. But this very protective attitude toward speech rests on a mistaken understanding of the role of free speech in a liberal society. The right to free speech is based on the liberal value of freedom, and as such can be no broader than freedom itself. (...)
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  14. How Expressivists Can and Should Solve Their Problem with Negation.Mark Schroeder - 2008 - Noûs 42 (4):573-599.
    Expressivists have a problem with negation. The problem is that they have not, to date, been able to explain why ‘murdering is wrong’ and ‘murdering is not wrong’ are inconsistent sentences. In this paper, I explain the nature of the problem, and why the best efforts of Gibbard, Dreier, and Horgan and Timmons don’t solve it. Then I show how to diagnose where the problem comes from, and consequently how it is possible for expressivists to solve it. Expressivists should accept (...)
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  15. The Philosophical Work of Mark Sharlow: an Introduction and Guide.Mark F. Sharlow - manuscript
    Provides an overview of Mark Sharlow's philosophical work with summaries of his positions. Includes references and links to his writings.
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  16. The Unfinishable Scroll and Beyond: Mark Sharlow's Blogs, July 2008 to March 2011.Mark F. Sharlow - manuscript
    An archive of Mark Sharlow's two blogs, "The Unfinishable Scroll" and "Religion: the Next Version." Covers Sharlow's views on metaphysics, epistemology, mind, science, religion, and politics. Includes topics and ideas not found in his papers.
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  17.  69
    The Truth in Hybrid Semantics.Mark Schroeder - 2014 - In Guy Fletcher & Michael R. Ridge (eds.), Having It Both Ways: Hybrid Theories and Modern Metaethics. New York: Oxford University Press. pp. 273-293.
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  18. Realism and reduction: The Quest for robustness.Mark Schroeder - 2005 - Philosophers' Imprint 5:1-18.
    It doesn’t seem possible to be a realist about the traditional Christian God while claiming to be able to reduce God talk in naturalistically acceptable terms. Reduction, in this case, seems obviously eliminativist. Many philosophers seem to think that the same is true of the normative—that reductive “realists” about the normative are not really realists about the normative at all, or at least, only in some attenuated sense. This paper takes on the challenge of articulating what it is that makes (...)
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  19. Rational stability under pragmatic encroachment.Mark Schroeder - 2018 - Episteme 15 (3):297-312.
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  20. A Conventionalist Account of Distinctively Mathematical Explanation.Mark Povich - 2023 - Philosophical Problems in Science 74:171–223.
    Distinctively mathematical explanations (DMEs) explain natural phenomena primarily by appeal to mathematical facts. One important question is whether there can be an ontic account of DME. An ontic account of DME would treat the explananda and explanantia of DMEs as ontic structures and the explanatory relation between them as an ontic relation (e.g., Pincock 2015, Povich 2021). Here I present a conventionalist account of DME, defend it against objections, and argue that it should be considered ontic. Notably, if indeed it (...)
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  21.  76
    Perceptual Reasons and Defeat.Mark Schroeder - 2021 - In Jessica Brown & Mona Simion (eds.), Reasons, Justification, and Defeat. Oxford Oxford: Oxford University Press. pp. 269-284.
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  22. Moral imagination: implications of cognitive science for ethics.Mark Johnson - 1993 - Chicago: University of Chicago Press.
    Using path-breaking discoveries of cognitive science, Mark Johnson argues that humans are fundamentally imaginative moral animals, challenging the view that morality is simply a system of universal laws dictated by reason. According to the Western moral tradition, we make ethical decisions by applying universal laws to concrete situations. But Johnson shows how research in cognitive science undermines this view and reveals that imagination has an essential role in ethical deliberation. Expanding his innovative studies of human reason in Metaphors We (...)
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  23. A short argument for truthmaker maximalism.Mark Jago - 2020 - Analysis 80 (1):40-44.
    Each truth has a truthmaker: an entity in virtue of whose existence that truth is true. So say truthmaker maximalists. Arguments for maximalism are hard to find, whereas those against are legion. Most accept that maximalism comes at a significant cost, which many judge to be too high. The scales would seem to be balanced against maximalism. Yet, as I show here, maximalism can be derived from an acceptable premise which many will pre-theoretically accept.
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  24. Unity in the Scientific Study of Intellectual Attention.Mark Fortney - 2020 - Canadian Journal of Philosophy 50 (4):444-459.
    I argue that using information from a cognitive representation to guide the performance of a primary task is sufficient for intellectual attention, and that this account of attention is endorsed by scientists working in the refreshing, n-back, and retro-cue paradigms. I build on the work of Wayne Wu, who developed a similarly motivated account, but for perceptual attention rather than intellectual attention. The way that I build on Wu’s account provides a principled way of responding to Watzl’s challenge to Wu, (...)
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  25. Buck-passers' negative thesis.Mark Schroeder - 2009 - Philosophical Explorations 12 (3):341-347.
    Buck-passers about value accept two theses about value, a negative thesis and a positive. The negative thesis is that the fact that something is valuable is not itself a reason to promote or appreciate it. The positive thesis is that the fact that something is valuable consists in the fact that there are other reasons to promote or appreciate it. Buck-passers suppose that the negative thesis follows from the positive one, and sometimes insist on it as if it is the (...)
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  26. Is the 'trade-off hypothesis' worth trading for?Mark Phelan & Hagop Sarkissian - 2009 - Mind and Language 24 (2):164-180.
    Abstract: Recently, the experimental philosopher Joshua Knobe has shown that the folk are more inclined to describe side effects as intentional actions when they bring about bad results. Edouard Machery has offered an intriguing new explanation of Knobe's work—the 'trade-off hypothesis'—which denies that moral considerations explain folk applications of the concept of intentional action. We critique Machery's hypothesis and offer empirical evidence against it. We also evaluate the current state of the debate concerning the concept of intentionality, and argue that, (...)
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  27. Shifting Perspective on Indexicals.Mark Bowker - 2022 - Pragmatics 32 (4):518-536.
    The debate over the meanings of indexical expressions has relied heavily on the method of counterexamples. This paper challenges that method by showing that purported counterexamples can often be explained away by appeal to perspective shifts. For these counterexamples to establish anything about indexical reference, we must identify the conditions under which theorists can legitimately appeal to perspective shifts. Some tests for semantic content are considered and it is argued that none of them can tell us when appeal to perspective (...)
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  28. The Ubiquity of State-Given Reasons.Mark Schroeder - 2012 - Ethics 122 (3):457-488.
    Philosophers have come to distinguish between ‘right’ and ‘wrong’ kinds of reasons for belief, intention, and other attitudes. Several theories about the nature of this distinction have been offered, by far the most prevalent of which is the idea that it is, at bottom, the distinction between what are known as ‘object-given’ and ‘state-given’ reasons. This paper argues that the object-given/state-given theory vastly overgeneralizes on a small set of data points, and in particular that any adequate account of the distinction (...)
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  29. Surviving Death.Mark Johnston - 2010 - Princeton University Press.
    Johnston presents an argument for a form of immortality that divests the notion of any supernatural elements. The book is packed with illuminating philosophical reflection on the question of what we are, and what it is for us to persist over time.
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  30. What matters about metaethics?Mark Schroeder - 2017 - In Peter Singer (ed.), Does Anything Really Matter? Responses to Parfit.
    According to Part VI of Derek Parfit’s On What Matters, some things matter.1 Indeed, there are normative truths to the effect that some things matter, and it matters that there are such truths. Moreover, according to Parfit, these normative truths are cognitive and irreducible. And in addition to mattering that there are normative truths about what matters, Parfit holds that it also matters that these truths are cognitive and irreducible. Indeed this matters so much that Parfit tells us that if (...)
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  31. When Beliefs Wrong.Mark Schroeder - 2018 - Philosophical Topics 46 (1):115-127.
    Most philosophers find it puzzling how beliefs could wrong, and this leads them to conclude that they do not. So there is much philosophical work to be done in sorting out whether I am right to say that they do, as well as how this could be so. But in this paper I will take for granted that beliefs can wrong, and ask instead when beliefs wrong. My answer will be that beliefs wrong when they falsely diminish. This answer has (...)
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  32. The Costs of HARKing.Mark Rubin - 2022 - British Journal for the Philosophy of Science 73 (2):535-560.
    Kerr coined the term ‘HARKing’ to refer to the practice of ‘hypothesizing after the results are known’. This questionable research practice has received increased attention in recent years because it is thought to have contributed to low replication rates in science. The present article discusses the concept of HARKing from a philosophical standpoint and then undertakes a critical review of Kerr’s twelve potential costs of HARKing. It is argued that these potential costs are either misconceived, misattributed to HARKing, lacking evidence, (...)
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  33. Stakes, withholding, and pragmatic encroachment on knowledge.Mark Schroeder - 2012 - Philosophical Studies 160 (2):265 - 285.
    Several authors have recently endorsed the thesis that there is what has been called pragmatic encroachment on knowledge—in other words, that two people who are in the same situation with respect to truth-related factors may differ in whether they know something, due to a difference in their practical circumstances. This paper aims not to defend this thesis, but to explore how it could be true. What I aim to do, is to show how practical factors could play a role in (...)
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  34. Skorupski on Being For.Mark Schroeder - 2012 - Analysis 72 (4):735-739.
    Next SectionIn a recent article in this journal, John Skorupski alleges that the expressivist view developed in Being For fails on its own terms. However, in order to set up his criticism of my book, he helps himself to the very assumption that it is the main contribution of my book to show how to reject. It is hardly a problem for me that you can re-create the problem I showed how to solve by making the very assumption that I (...)
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  35.  41
    Believing Well.Mark Schroeder - 2018 - In Conor McHugh, Jonathan Way & Daniel Whiting (eds.), Metaepistemology. Oxford: Oxford University Press. pp. 196-212.
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  36. Being Positive About Negative Facts.Mark Jago & Stephen Barker - 2012 - Philosophy and Phenomenological Research 85 (1):117-138.
    Negative facts get a bad press. One reason for this is that it is not clear what negative facts are. We provide a theory of negative facts on which they are no stranger than positive atomic facts. We show that none of the usual arguments hold water against this account. Negative facts exist in the usual sense of existence and conform to an acceptable Eleatic principle. Furthermore, there are good reasons to want them around, including their roles in causation, chance-making (...)
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  37.  58
    Convergence in Plan.Mark Schroeder - 2021 - In Billy Dunaway & David Plunkett (eds.), Meaning, Decision, and Norms: Themes From the Work of Allan Gibbard. Ann Arbor, Michigan: Maize Books. pp. 307-318.
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  38. Research Notes of Mark Pettinelli.Mark Pettinelli - manuscript
    Research notes of Mark Pettinelli about cognitive science, cognitive psychology.
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  39. The Collected Works of Mark Rozen Pettinelli [2006-2015].Mark Pettinelli - manuscript
    This collection of articles is almost all of the psychological writings of Mark Pettinelli.
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  40. A Problem for Generic Generalisations in Scientific Communication.Mark Bowker - 2023 - Journal of Applied Philosophy 40 (1):123-132.
    Generic generalisations like ‘Opioids are highly addictive’ are very useful in scientific communication, but they can often be interpreted in many different ways. Although this is not a problem when all interpretations provide the same answer to the question under discussion, a problem arises when a generic generalisation is used to answer a question other than that originally intended. In such cases, some interpretations of the generalisation might answer the question in a way that the original speaker would not endorse. (...)
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  41. Doxastic Voluntarism.Mark Boespflug & Elizabeth Jackson - forthcoming - Stanford Encyclopedia of Philosophy.
    Doxastic voluntarism is the thesis that our beliefs are subject to voluntary control. While there’s some controversy as to what “voluntary control” amounts to (see 1.2), it’s often understood as direct control: the ability to bring about a state of affairs “just like that,” without having to do anything else. Most of us have direct control over, for instance, bringing to mind an image of a pine tree. Can one, in like fashion, voluntarily bring it about that one believes a (...)
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  42. Causation, Norm violation, and culpable control.Mark D. Alicke, David Rose & Dori Bloom - 2011 - Journal of Philosophy 108 (12):670-696.
    Causation is one of philosophy's most venerable and thoroughly-analyzed concepts. However, the study of how ordinary people make causal judgments is a much more recent addition to the philosophical arsenal. One of the most prominent views of causal explanation, especially in the realm of harmful or potentially harmful behavior, is that unusual or counternormative events are accorded privileged status in ordinary causal explanations. This is a fundamental assumption in psychological theories of counterfactual reasoning, and has been transported to philosophy by (...)
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  43. Mental Notes of Mark Pettinelli.Mark Pettinelli - manuscript
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  44. Fanaticism in the manosphere.Mark Alfano & Paul-Mikhail Podosky - 2023 - In Paul Katsafanas (ed.), Fanaticism and the History of Philosophy. London: Rewriting the History of Philosophy.
    This chapter explores a case study in contemporary fanaticism. We adopt Katsafanas’s conceptualization of fanaticism to make possible an in-depth discussion of and evaluation of a diffuse but important social movement — the anglophone manosphere. According to Katsafanas, fanatics are fruitfully understood as members of a group that adopts sacred values which they hold unconditionally to preserve their own psychic unity, and who feel that those values are threatened by those who do not accept them. The manosphere includes several social (...)
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  45. Conceptualizing intellectual attention.Mark Fortney - 2019 - Theory & Psychology 1:1-14.
    Remembering that there’s a difference between intellectual and perceptual attention can help us avoid miscommunication due to meaning different things by the same terms, which has been a particular problem during the last hundred years or so of the study of attention. I demonstrate this through analyzing in depth one such miscommunication that occurred in a philosophical criticism of the influential psychological text, Inattentional Blindness. But after making the distinction between perceptual attention and intellectual attention, and after making an effort (...)
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  46. Rethinking Wholes and Parts: Reflections on Reductionism, Holism, and Mereology.Mark Sharlow - manuscript
    In this set of excerpts from an earlier book, I examine some philosophical issues surrounding the whole-part relationship. I present a series of thought experiments and other arguments designed to undermine the view that wholes are "nothing but" their parts.
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  47.  84
    Humean Vice Epistemology: The Case of Prejudice.Mark Collier - 2025 - In Scott Stapleford & Verena Wagner (eds.), Hume and contemporary epistemology. New York, NY: Routledge.
    Hume argues that we succumb to the vice of prejudice when we fail to correct negative generalizations about social groups in the face of counter-evidence. We are blameworthy for these biases, moreover, even if they are unavoidable. Hume’s theory of doxastic responsibility entails that his own racial prejudices are deserving of condemnation. In contrast, contemporary vice epistemologists are more inclined to absolve agents of culpability for prejudices beyond their control.
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  48. Common Subject for Ethics.Mark Schroeder - 2021 - Mind 130 (517):85-110.
    The purpose of this paper is to conceptualize and explore what I shall call the Common Subject Problem for ethics. The problem is that there seems to be no good answer to what property everyone who makes moral claims could be talking and thinking about. The Common Subject Problem is not a new problem; on the contrary, I will argue that it is one of the central animating concerns in the history of both metaethics and normative theory. But despite its (...)
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  49. Getting the Message and Grasping it: the Give-and-Take of Discourse.Mark Sluys - 2019 - Philosophia 47 (1):207-224.
    Can one fully succeed in performing illocutionary acts addressed to others if they do not understand what one is purportedly saying? Can one, for example, tell others something if they do not understand what one supposedly said? It is not uncommon for speech act theorist to claim that one cannot. I, in contrast, will be arguing that it is possible for a speaker to fully succeed in performing interpersonal illocutionary acts even if addressee understanding of what is said is not (...)
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  50. Tempered expressivism.Mark Schroeder - 2013 - Oxford Studies in Metaethics (1).
    The basic idea of expressivism is that for some sentences ‘P’, believing that P is not just a matter of having an ordinary descriptive belief. This is a way of capturing the idea that the meaning of some sentences either exceeds their factual/descriptive content or doesn’t consist in any particular factual/descriptive content at all, even in context. The paradigmatic application for expressivism is within metaethics, and holds that believing that stealing is wrong involves having some kind of desire-like attitude, with (...)
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