Results for 'Musen Mark'

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  1. The National Center for Biomedical Ontology.Mark A. Musen, Natalya F. Noy, Nigam H. Shah, Patricia L. Whetzel, Christopher G. Chute, Margaret-Anne Story & Barry Smith - 2012 - Journal of the American Medical Informatics Association 19 (2):190-195.
    The National Center for Biomedical Ontology is now in its seventh year. The goals of this National Center for Biomedical Computing are to: create and maintain a repository of biomedical ontologies and terminologies; build tools and web services to enable the use of ontologies and terminologies in clinical and translational research; educate their trainees and the scientific community broadly about biomedical ontology and ontology-based technology and best practices; and collaborate with a variety of groups who develop and use ontologies and (...)
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  2. Towards Interoperability of Biomedical Ontologies - Report Number 07132.Mark Musen, Michael Schroeder & Barry Smith - 2008 - In Musen Mark, A. Schroeder, Michael Smith & Barry, Towards Interoperability of Biomedical Ontologies. Schloss Dagstuhl: Leibniz-Zentrum für Informatik.
    The meeting focused on uses of ontologies, with a special focus on spatial ontologies, in addressing the ever increasing needs faced by biology and medicine to cope with ever expanding quantities of data. To provide effective solutions computers need to integrate data deriving from myriad heterogeneous sources by bringing the data together within a single framework. The meeting brought together leaders in the field of what are called "top-level ontologies" to address this issue, and to establish strategies among leaders in (...)
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  3. Applied Ontology: Focusing on content.Nicola Guarino & Mark A. Musen - 2005 - Applied ontology 1 (1):1-5.
    In a world that is overflowing with journals and other outlets for scientific publication, the appearance of any new periodical requires some justification. There are already more journals than we can read and more conferences than we can attend. In the case of applied Ontology, we believe that the creation of anew journal not only is completely justifiable, it is downright exciting. For too long, workers in computer science have assumed that content comes for free. “Theory” in computer science has (...)
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  4. ARGOS policy brief on semantic interoperability.Dipak Kalra, Mark Musen, Barry Smith & Werner Ceusters - 2011 - Studies in Health Technology and Informatics 170 (1):1-15.
    Semantic interoperability requires the use of standards, not only for Electronic Health Record (EHR) data to be transferred and structurally mapped into a receiving repository, but also for the clinical content of the EHR to be interpreted in conformity with the original meanings intended by its authors. Accurate and complete clinical documentation, faithful to the patient’s situation, and interoperability between systems, require widespread and dependable access to published and maintained collections of coherent and quality-assured semantic resources, including models such as (...)
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  5. Ten years of Applied Ontology.Nicola Guarino & Mark A. Musen - 2015 - Applied ontology 10 (3-4):169-170.
    This is a short editorial to introduce the double issue of Applied Ontology that celebrates the journal's tenth anniversary. At a time when information technology of all kinds depends on the use of explicit ontologies, our journal addresses the modeling issues that underlie the next generation of computational systems. As the editors of Applied Ontology, we are excited by how far we have come in the past decade and by the opportunities that await our research community.
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  6. Ontology Summit 2008 Communiqué: Towards an open ontology repository.Leo Obrst, Mark Musen, Barry Smith, Fabian Neuhaus, Frank Olken, Mike Gruninger, M. Raymond, Patrick Hayes & Raj Sharma - 2008 - In Leo Obrst, Mark Musen, Barry Smith, Fabian Neuhaus, Frank Olken, Mike Gruninger, M. Raymond, Patrick Hayes & Raj Sharma, Ontology Summit 2008 Communiqué: Towards an open ontology repository. cim3. net.
    Each annual Ontology Summit initiative makes a statement appropriate to each Summit’s theme as part of our general advocacy designed to bring ontology science and engineering into the mainstream. The theme this year is "Towards an Open Ontology Repository". This communiqué represents the joint position of those who were engaged in the year's summit discourse on an Open Ontology Repository (OOR) and of those who endorse below. In this discussion, we have agreed that an "ontology repository is a facility where (...)
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  7. National Center for Biomedical Ontology: Advancing biomedicine through structured organization of scientific knowledge.Daniel L. Rubin, Suzanna E. Lewis, Chris J. Mungall, Misra Sima, Westerfield Monte, Ashburner Michael, Christopher G. Chute, Ida Sim, Harold Solbrig, M. A. Storey, Barry Smith, John D. Richter, Natasha Noy & Mark A. Musen - 2006 - Omics: A Journal of Integrative Biology 10 (2):185-198.
    The National Center for Biomedical Ontology is a consortium that comprises leading informaticians, biologists, clinicians, and ontologists, funded by the National Institutes of Health (NIH) Roadmap, to develop innovative technology and methods that allow scientists to record, manage, and disseminate biomedical information and knowledge in machine-processable form. The goals of the Center are (1) to help unify the divergent and isolated efforts in ontology development by promoting high quality open-source, standards-based tools to create, manage, and use ontologies, (2) to create (...)
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  8. Bioportal: Ontologies and integrated data resources at the click of the mouse.L. Whetzel Patricia, H. Shah Nigam, F. Noy Natalya, Dai Benjamin, Dorf Michael, Griffith Nicholas, Jonquet Clement, Youn Cherie, Callendar Chris, Coulet Adrien, Barry Smith, Chris Chute & Mark Musen - 2011 - In Whetzel Patricia L., Shah Nigam H., Noy Natalya F., Benjamin Dai, Michael Dorf, Nicholas Griffith, Clement Jonquet, Cherie Youn, Chris Callendar, Adrien Coulet, Smith Barry, Chute Chris & Musen Mark, Proceedings of the 2nd International Conference on Biomedical Ontology, Buffalo, NY. pp. 292-293.
    BioPortal is a Web portal that provides access to a library of biomedical ontologies and terminologies developed in OWL, RDF(S), OBO format, Protégé frames, and Rich Release Format. BioPortal functionality, driven by a service-oriented architecture, includes the ability to browse, search and visualize ontologies (Figure 1). The Web interface also facilitates community-based participation in the evaluation and evolution of ontology content.
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  9. Towards Interoperability of Biomedical Ontologies.Musen Mark, A. Schroeder, Michael Smith & Barry - 2008 - Schloss Dagstuhl: Leibniz-Zentrum für Informatik.
    Report on Dagstuhl Seminar 07132, Schloss Dagstuhl, March 27-30 , 2007.
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  10. Research Notes of Mark Pettinelli.Mark Pettinelli - manuscript
    Research notes of Mark Pettinelli about cognitive science, cognitive psychology.
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  11. My Final Analysis of Everything - including Emotions, Feelings and Thoughts - By Mark Rozen Pettinelli.Mark Pettinelli - 2020
    This article is one of the final works of Mark Pettinelli and discusses feelings, emotions and cognitive psychology.
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  12. The Selected Writings of Mark Pettinelli.Mark Pettinelli - manuscript
    The best writing of Mark Pettinelli, about cognitive psychology, cognitive science, etc.
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  13. The Philosophical Work of Mark Sharlow: an Introduction and Guide.Mark F. Sharlow - manuscript
    Provides an overview of Mark Sharlow's philosophical work with summaries of his positions. Includes references and links to his writings.
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  14. Augustine and William James on the Rationality of Faith.Mark J. Boone - 2018 - Heythrop Journal (4):648-659.
    Augustine and William James both argue that religious faith can be both practical and rational even in the absence of knowledge. Augustine argues that religious faith is trust and that trust is a normal, proper, and even necessary way of believing. Beginning with faith, we then work towards knowledge by means of philosophical contemplation. James’ “The Will to Believe” makes pragmatic arguments for the rationality of faith. Although we do not know (yet) whether God exists, faith is a choice between (...)
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  15. Film, Perception, Aesthetics: An interview with Bence Nanay.Mark Windsor - 2014 - Postgraduate Journal of Aesthetics 11 (1):2-17.
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  16. The Prince and the Phone Booth: Reporting Puzzling Beliefs.Mark Crimmins & John Perry - 1989 - Journal of Philosophy 86 (12):685.
    Beliefs are concrete particulars containing ideas of properties and notions of things, which also are concrete. The claim made in a belief report is that the agent has a belief (i) whose content is a specific singular proposition, and (ii) which involves certain of the agent's notions and ideas in a certain way. No words in the report stand for the notions and ideas, so they are unarticulated constituents of the report's content (like the relevant place in "it's raining"). The (...)
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  17. Technologically scaffolded atypical cognition: the case of YouTube’s recommender system.Mark Alfano, Amir Ebrahimi Fard, J. Adam Carter, Peter Clutton & Colin Klein - 2020 - Synthese 199 (1):835-858.
    YouTube has been implicated in the transformation of users into extremists and conspiracy theorists. The alleged mechanism for this radicalizing process is YouTube’s recommender system, which is optimized to amplify and promote clips that users are likely to watch through to the end. YouTube optimizes for watch-through for economic reasons: people who watch a video through to the end are likely to then watch the next recommended video as well, which means that more advertisements can be served to them. This (...)
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  18. Reply to Reasons Latesters.Mark Schroeder - 2024 - Philosophical Studies 181 (2):637-648.
    It is an honor to receive such careful and attentive criticism. In this response, I attempt to put the criticisms of the reasons latesters into the context of my argumentative aims in the book and to point toward how they might be answered.
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  19. Krista K. Thomason, Naked: The Dark Side of Shame and Moral Life, Oxford University Press, 2018.Mark Alfano - forthcoming - Criminal Justice Ethics.
    In Naked, Krista K. Thomason offers a multi-faceted account of shame, covering its nature as an emotion, its positive and negative roles in moral life, its association with violence, and its provocation through invitations to shame, public shaming, and stigmatization. Along the way, she reflects on a range of examples drawn from literature, memoirs, journalism, and her own imagination. She also considers alternative views at length, draws a wealth of important distinctions, and articulates many of the most intuitive objections to (...)
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  20. The Collected Works of Mark Rozen Pettinelli [2006-2015].Mark Pettinelli - manuscript
    This collection of articles is almost all of the psychological writings of Mark Pettinelli.
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  21. The Unfinishable Scroll and Beyond: Mark Sharlow's Blogs, July 2008 to March 2011.Mark F. Sharlow - manuscript
    An archive of Mark Sharlow's two blogs, "The Unfinishable Scroll" and "Religion: the Next Version." Covers Sharlow's views on metaphysics, epistemology, mind, science, religion, and politics. Includes topics and ideas not found in his papers.
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  22. Norm manipulation as a condition of friendship.Mark Phelan - 2024 - Inquiry: An Interdisciplinary Journal of Philosophy (6):1524-1530.
    Cathy Mason (2020) argues – against my position in Phelan (2019) – that significant norm-manipulation is unnecessary for friendship. Instead, she holds that norm manipulation is a, perhaps omnipresent, causal result of the very feature I deny as necessary to friendship: mutual caring or love. Mason’s counter-examples allow for further explication of the norm-manipulation view of friendship. However, they do not constitute a compelling challenge to that view, because they do not seem to involve collaborative norm manipulation at all. Instead, (...)
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  23. Reason, Authority, and the Healing of Desire in the Writings of Augustine.Mark J. Boone - 2020 - Lanham: Lexington Books.
    NOW OPEN-ACCESS! In Reason, Authority, and the Healing of Desire in the Writings of Augustine, Mark Boone explains Augustine’s theology of desire in a cross-section of his writings. He shows that Augustine's writings consistently teach a Platonically informed, yet distinctively Christian, theology of desire.
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  24. Moral imagination: implications of cognitive science for ethics.Mark Johnson - 1993 - Chicago: University of Chicago Press.
    Using path-breaking discoveries of cognitive science, Mark Johnson argues that humans are fundamentally imaginative moral animals, challenging the view that morality is simply a system of universal laws dictated by reason. According to the Western moral tradition, we make ethical decisions by applying universal laws to concrete situations. But Johnson shows how research in cognitive science undermines this view and reveals that imagination has an essential role in ethical deliberation. Expanding his innovative studies of human reason in Metaphors We (...)
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  25. Technological Seduction and Self-Radicalization.Mark Alfano, Joseph Adam Carter & Marc Cheong - 2018 - Journal of the American Philosophical Association (3):298-322.
    Many scholars agree that the Internet plays a pivotal role in self-radicalization, which can lead to behaviours ranging from lone-wolf terrorism to participation in white nationalist rallies to mundane bigotry and voting for extremist candidates. However, the mechanisms by which the Internet facilitates self-radicalization are disputed; some fault the individuals who end up self-radicalized, while others lay the blame on the technology itself. In this paper, we explore the role played by technological design decisions in online self-radicalization in its myriad (...)
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  26. Love and Emotional Fit: What Does Christian Theology Tell Us About Unfitting Emotions?1.Mark J. Boone - 2018 - Heythrop Journal 62 (3):444-453.
    Scholars have devoted considerable attention to the discovery by Justin D’Arms and Daniel Jacobson of a distinction between the fittingness of an emotion and the propriety of the same. Meanwhile, Christian theology has long been attentive to the relevance of Christian theology to the emotions. Although it seems that never so far have the twain discussions met, they should meet. A fitting emotion accurately construes a situation. Christian theology tells us something about the importance—or the lack thereof—of emotional fit for (...)
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  27. Patchworks.Mark F. Sharlow - manuscript
    This book is a collection of some of my writings that do not fit the mold of standard philosophical articles. These writings range over several topics, including religion, free will, human dignity, the nature of persons, and a few others. The longest item in the collection is an archive of my blog, The Unfinishable Scroll, as it existed when the book was put together. That blog covers many philosophical topics, including some I haven't discussed elsewhere. Also in the collection are (...)
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  28. (1 other version)Universal hinges and the bounds of sense.Mark Fortney - 2019 - Philosophia:1-13.
    According to Danièle Moyal-Sharrock, Wittgenstein’s On Certainty presents a theory of hinges, and hinges have a role to play in a foundationalist epistemology (2013). Michael Williams (2005) and Annalisa Coliva (2013 ) have claimed that the hinges are not suitable to play such a role as they are not shared universally. Moyal-Sharrock has replied that a subset of the hinges is suitable to play such a role: the “universal” hinges. I argue that for Moyal-Sharrock’s reply to be sustained, she must (...)
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  29. Mental Notes of Mark Pettinelli.Mark Pettinelli - manuscript
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  30. Experientialism Unidealized.Mark Schroeder - 2023 - Philosophical Studies 180 (8):2485-2489.
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  31. Being for: Evaluating the semantic program of expressivism * by mark Schroeder * clarendon press, 2008. XVI + 198 pp. {pound}27.50: Summary. [REVIEW]Mark Schroeder - 2010 - Analysis 70 (1):101-104.
    (No abstract is available for this citation).
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  32. When Beliefs Wrong.Mark Schroeder - 2018 - Philosophical Topics 46 (1):115-127.
    Most philosophers find it puzzling how beliefs could wrong, and this leads them to conclude that they do not. So there is much philosophical work to be done in sorting out whether I am right to say that they do, as well as how this could be so. But in this paper I will take for granted that beliefs can wrong, and ask instead when beliefs wrong. My answer will be that beliefs wrong when they falsely diminish. This answer has (...)
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  33. The Ubiquity of State-Given Reasons.Mark Schroeder - 2012 - Ethics 122 (3):457-488.
    Philosophers have come to distinguish between ‘right’ and ‘wrong’ kinds of reasons for belief, intention, and other attitudes. Several theories about the nature of this distinction have been offered, by far the most prevalent of which is the idea that it is, at bottom, the distinction between what are known as ‘object-given’ and ‘state-given’ reasons. This paper argues that the object-given/state-given theory vastly overgeneralizes on a small set of data points, and in particular that any adequate account of the distinction (...)
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  34. Natural Belief in Persistent Selves.Mark Collier - 2021 - Philosophical Psychology 34 (8):1146–1166.
    In “Of Personal Identity”, Hume attempts to understand why we ordinarily believe in persistent selves. He proposes that this ontological commitment depends on illusions and fictions: the imagination tricks us into supposing that an unchanging core self remains static through the flux and change of experience. Recent work in cognitive science provides a good deal of support for Hume’s hypothesis that common beliefs about the self are founded on psychological biases rather than rational insight or evidence. We naturally believe in (...)
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  35. Hesperus and Phosphorus.Mark Crimmins - 1998 - Philosophical Review 107 (1):1-47.
    In “On Sense and Reference,” surrounding his discussion of how we describe what people say and think, identity is Frege’s first stop and his last. We will follow Frege’s plan here, but we will stop also in the land of make-believe.
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  36. Stakes, withholding, and pragmatic encroachment on knowledge.Mark Schroeder - 2012 - Philosophical Studies 160 (2):265 - 285.
    Several authors have recently endorsed the thesis that there is what has been called pragmatic encroachment on knowledge—in other words, that two people who are in the same situation with respect to truth-related factors may differ in whether they know something, due to a difference in their practical circumstances. This paper aims not to defend this thesis, but to explore how it could be true. What I aim to do, is to show how practical factors could play a role in (...)
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  37. The Narrow Ontic Counterfactual Account of Distinctively Mathematical Explanation.Mark Povich - 2021 - British Journal for the Philosophy of Science 72 (2):511-543.
    An account of distinctively mathematical explanation (DME) should satisfy three desiderata: it should account for the modal import of some DMEs; it should distinguish uses of mathematics in explanation that are distinctively mathematical from those that are not (Baron [2016]); and it should also account for the directionality of DMEs (Craver and Povich [2017]). Baron’s (forthcoming) deductive-mathematical account, because it is modelled on the deductive-nomological account, is unlikely to satisfy these desiderata. I provide a counterfactual account of DME, the Narrow (...)
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  38. Fanaticism in the manosphere.Mark Alfano & Paul-Mikhail Podosky - 2023 - In Paul Katsafanas, Fanaticism and the History of Philosophy. London: Rewriting the History of Philosophy.
    This chapter explores a case study in contemporary fanaticism. We adopt Katsafanas’s conceptualization of fanaticism to make possible an in-depth discussion of and evaluation of a diffuse but important social movement — the anglophone manosphere. According to Katsafanas, fanatics are fruitfully understood as members of a group that adopts sacred values which they hold unconditionally to preserve their own psychic unity, and who feel that those values are threatened by those who do not accept them. The manosphere includes several social (...)
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  39. Identifying Virtues and Values Through Obituary Data-Mining.Mark Alfano, Andrew Higgins & Jacob Levernier - 2018 - Journal of Value Inquiry 52 (1).
    Because obituaries are succinct and explicitly intended to summarize their subjects’ lives, they may be expected to include only the features that the author finds most salient but also to signal to others in the community the socially-recognized aspects of the deceased’s character. We begin by reviewing studies 1 and 2, in which obituaries were carefully read and labeled. We then report study 3, which further develops these results with a semi-automated, large-scale semantic analysis of several thousand obituaries. Geography, gender, (...)
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  40. Getting Perspective on Objective Reasons.Mark Schroeder - 2018 - Ethics 128 (2):289-319.
    This article considers two important problems for the idea that what we ought to do is determined by the balance of competing reasons. The problems are distinct, but the object of the article is to explore how they admit of a single solution. It is a consequence of this solution that objective reasons—facts that count in favor—are in an important sense less objective than they have consistently been assumed to be. This raises but does not answer the question as to (...)
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  41. The Morality of Tipping.Mark Maller - 1993 - Public Affairs Quarterly 7 (3):231-239.
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  42. Ontology and Providence in Creation: Taking Ex Nihilo Seriously.Mark Ian Thomas Robson - 2008 - Continuum.
    My concern is to overturn the Leibnizean model of God's creation of the world which proposes that God selected a possible world out of a whole host of other alternative ones. This is the familiar possible worlds model of creation. I argue that this understanding of creation does not take seriously the idea of ex nihilo and that, rather than considering determinate possible worlds, we should understand possibility as indeterminate. I then develop this argument and explores how it impacts on (...)
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  43. A plague on both your houses: Virtue theory after situationism and repligate.Mark Alfano - 2018 - Teoria.
    Virtues are dispositions that make their bearers admirable. Dispositions can be studied scientifically by systematically varying whether their alleged bearers are in (or take themselves to be in) the dispositions' eliciting conditions. In recent decades, empirically-minded philosophers looked to social and personality psychology to study the extent to which ordinary humans embody dispositions traditionally considered admirable in the Aristotelian tradition. This led some to conclude that virtues are not attainable ideals, and that we should focus our ethical reflection and efforts (...)
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  44. Development and validation of a multi-dimensional measure of intellectual humility.Mark Alfano, Kathryn Iurino, Paul Stey, Brian Robinson, Markus Christen, Feng Yu & Daniel Lapsley - 2017 - PLoS ONE 12 (8):e0182950.
    This paper presents five studies on the development and validation of a scale of intellectual humility. This scale captures cognitive, affective, behavioral, and motivational components of the construct that have been identified by various philosophers in their conceptual analyses of intellectual humility. We find that intellectual humility has four core dimensions: Open-mindedness (versus Arrogance), Intellectual Modesty (versus Vanity), Corrigibility (versus Fragility), and Engagement (versus Boredom). These dimensions display adequate self-informant agreement, and adequate convergent, divergent, and discriminant validity. In particular, Open-mindedness (...)
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  45. Augustine’s Preaching and the Healing of Desire in the Enarrationes in Psalmos.Mark J. Boone - 2023 - Lanham, MD: Lexington Books.
    The Enarrationes in Psalmos is the collection of Augustine’s commentaries and sermons on the Psalms. Although Augustine is often at his philosophical best here, bearing various resemblances to the Platonists and other philosophers, he also articulates a distinctively Christian view on what we should desire, on how desire has gone wrong, and on how it is healed. The renewal of desire takes place as a result of and through the unity of Christ and the church, which is the guiding theme (...)
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  46. Truthmaker Semantics for Relevant Logic.Mark Jago - 2020 - Journal of Philosophical Logic 49 (4):681-702.
    I develop and defend a truthmaker semantics for the relevant logic R. The approach begins with a simple philosophical idea and develops it in various directions, so as to build a technically adequate relevant semantics. The central philosophical idea is that truths are true in virtue of specific states. Developing the idea formally results in a semantics on which truthmakers are relevant to what they make true. A very natural notion of conditionality is added, giving us relevant implication. I then (...)
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  47. Type I error rates are not usually inflated.Mark Rubin - 2024 - Journal of Trial and Error 4 (2):46-71.
    The inflation of Type I error rates is thought to be one of the causes of the replication crisis. Questionable research practices such as p-hacking are thought to inflate Type I error rates above their nominal level, leading to unexpectedly high levels of false positives in the literature and, consequently, unexpectedly low replication rates. In this article, I offer an alternative view. I argue that questionable and other research practices do not usually inflate relevant Type I error rates. I begin (...)
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  48. Pegasus Explained Away.Mark Ressler - manuscript
    The consequences of Quine's criterion of ontological commitment epitomized in his treatment of the term 'Pegasus' in "On What There Is" are evaluated in terms of Quine's own work, in particular in "The Variable" and "Variables Explained Away". There is a cost to maintaining this criterion with regard to the empirical consequences of some non-existent objects, given considerations prompted by Quine's holism. This cost can be reduced by adopting a noneist position according to which non-existent objects can be values of (...)
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  49. Form Without Matter: Empedocles and Aristotle on Color Perception.Mark Eli Kalderon - 2015 - Oxford: Oxford University Press.
    Mark Eli Kalderon presents an original study of perception, taking as its starting point a puzzle in Empedocles' theory of vision: if perception is a mode of material assimilation, how can we perceive colors at a distance? Kalderon argues that the theory of perception offered by Aristotle in answer to the puzzle is both attractive and defensible.
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  50. (1 other version)Trust in a social and digital world.Mark Alfano & Colin Klein - 2019 - Social Epistemology Review and Reply Collective 1 (8):1-8.
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