Results for 'Barry T. Peterson'

948 found
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  1. Who Should Pay for the Damage of the Global Financial Crisis?Christian Barry & Matt Peterson - 2011 - In Ned Dobos Christian Barry & Thomas Pogge (eds.), Global Financial Crisis: The Ethical Issues. Palgrave.
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  2. Dealing Fairly with the Costs to the Poor of the Global Financial Crisis.Christian Barry & Matthew Peterson - 2010 - In Iain G. MacNeil & Justin O'Brien (eds.), The Future of Financial Regulation. Hart.
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  3. Bioinformatics advances in saliva diagnostics.Ji-Ye Ai, Barry Smith & David T. W. Wong - 2012 - International Journal of Oral Science 4 (2):85--87.
    There is a need recognized by the National Institute of Dental & Craniofacial Research and the National Cancer Institute to advance basic, translational and clinical saliva research. The goal of the Salivaomics Knowledge Base (SKB) is to create a data management system and web resource constructed to support human salivaomics research. To maximize the utility of the SKB for retrieval, integration and analysis of data, we have developed the Saliva Ontology and SDxMart. This article reviews the informatics advances in saliva (...)
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  4. Von T. G. Masaryk bis Jan Patočka: Eine philosophische Skizze.Barry Smith - 1992 - In Thomas Binder & Josef Zumr (eds.), T. G. Masaryk und die Brentano-Schule. Rodopi. pp. 94-110.
    Thomas Garrigue Masaryk, later founder and President of the Republic of Czechoslovakia, studied philosophy in the University of Vienna from 1872 to 1876, where he came under the powerful influence of Franz Brentano. We survey the role of Brentano’s philosophy, and especially of his ethics, in Masaryk’s life and work.
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  5. The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics.Laurel Cooper, Austin Meier, Marie-Angélique Laporte, Justin L. Elser, Chris Mungall, Brandon T. Sinn, Dario Cavaliere, Seth Carbon, Nathan A. Dunn, Barry Smith, Botong Qu, Justin Preece, Eugene Zhang, Sinisa Todorovic, Georgios Gkoutos, John H. Doonan, Dennis W. Stevenson, Elizabeth Arnaud & Pankaj Jaiswal - 2018 - Nucleic Acids Research 46 (D1):D1168–D1180.
    The Planteome project provides a suite of reference and species-specific ontologies for plants and annotations to genes and phenotypes. Ontologies serve as common standards for semantic integration of a large and growing corpus of plant genomics, phenomics and genetics data. The reference ontologies include the Plant Ontology, Plant Trait Ontology, and the Plant Experimental Conditions Ontology developed by the Planteome project, along with the Gene Ontology, Chemical Entities of Biological Interest, Phenotype and Attribute Ontology, and others. The project also provides (...)
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  6. Efficient Markets and Alienation.Barry Maguire - 2022 - Philosophers' Imprint 14.
    Efficient markets are alienating if they inhibit us from recognizably caring about one another in our productive activities. I argue that efficient market behaviour is both exclusionary and fetishistic. As exclusionary, the efficient marketeer cannot manifest care alongside their market behaviour. As fetishistic, the efficient marketeer cannot manifest care in their market behaviour. The conjunction entails that efficient market behavior inhibits care. It doesn’t follow that efficient market behavior is vicious: individuals might justifiably commit to efficiency because doing so serves (...)
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  7. La verità trionfa: Da T. G. Masaryk a Jan Patočka.Barry Smith - 1991 - Discipline Filosofiche 2:207–227.
    Thomas Garrigue Masaryk, later founder and President of the Republic of Czechoslovakia, studied philosophy in the University of Vienna from 1872 to 1876, where he came under the powerful influence of Franz Brentano. We survey the role of Brentano’s philosophy, and especially of his ethics, in Masaryk’s life and work.
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  8. (1 other version)A strategy for improving and integrating biomedical ontologies.Cornelius Rosse, Anand Kumar, Jose L. V. Mejino, Daniel L. Cook, Landon T. Detwiler & Barry Smith - 2007 - In Ron Rudnicki (ed.), Proceedings of the Annual Symposium of the American Medical Informatics Association. AMIA. pp. 639-643.
    The integration of biomedical terminologies is indispensable to the process of information integration. When terminologies are linked merely through the alignment of their leaf terms, however, differences in context and ontological structure are ignored. Making use of the SNAP and SPAN ontologies, we show how three reference domain ontologies can be integrated at a higher level, through what we shall call the OBR framework (for: Ontology of Biomedical Reality). OBR is designed to facilitate inference across the boundaries of domain ontologies (...)
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  9. Intelligence. And what computers still can’t do.Jobst Landgrebe & Barry Smith - 2024 - Cosmos+Taxis 12 (5+6):104-114.
    We comment on the collection of papers inspired by our book Why Machines Will Never Rule the World published in volume 12 (5+6) of the journal Cosmos+Taxis. We summarize the arguments made by the contributors about what we say in the book, and then show where we disagree.
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  10. A domain ontology for the non-coding RNA field.Jingshan Huang, Karen Eilbeck, Judith A. Blake, Dejing Dou, Darren A. Natale, Alan Ruttenberg, Barry Smith, Michael T. Zimmermann, Guoqian Jiang & Yu Lin - 2015 - In Huang Jingshan, Eilbeck Karen, Blake Judith A., Dou Dejing, Natale Darren A., Ruttenberg Alan, Smith Barry, Zimmermann Michael T., Jiang Guoqian & Lin Yu (eds.), IEEE International Conference on Bioinformatics and Biomedicine (IEEE BIBM 2015). pp. 621-624.
    Identification of non-coding RNAs (ncRNAs) has been significantly enhanced due to the rapid advancement in sequencing technologies. On the other hand, semantic annotation of ncRNA data lag behind their identification, and there is a great need to effectively integrate discovery from relevant communities. To this end, the Non-Coding RNA Ontology (NCRO) is being developed to provide a precisely defined ncRNA controlled vocabulary, which can fill a specific and highly needed niche in unification of ncRNA biology.
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  11. The Non-Coding RNA Ontology : a comprehensive resource for the unification of non-coding RNA biology.Huang Jingshan, Eilbeck Karen, Barry Smith, A. Blake Judith, Dou Dejing, Huang Weili, A. Natale Darren, Ruttenberg Alan, Huan Jun & T. Zimmermann Michael - 2016 - Journal of Biomedical Semantics 7 (1).
    In recent years, sequencing technologies have enabled the identification of a wide range of non-coding RNAs (ncRNAs). Unfortunately, annotation and integration of ncRNA data has lagged behind their identification. Given the large quantity of information being obtained in this area, there emerges an urgent need to integrate what is being discovered by a broad range of relevant communities. To this end, the Non-Coding RNA Ontology (NCRO) is being developed to provide a systematically structured and precisely defined controlled vocabulary for the (...)
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  12. Philosophie, Politik und Wissenschaftliche Weltauffassung.Barry Smith - 2000 - Grazer Philosophische Studien 58 (1):1-22.
    Die Entwicklung der Philosophie in Österreich unterscheidet sich in markanter Weise von der Hauptlinie der philosophischen Entwicklung in Deutschland. Dabei fällt bei der österreichischen Philosophie vor allem die konsequente Orientierung an den Wissenschaften auf. In der philosophiegeschichtlichen Forschung sind für diese Besonderheit der österreichischen Philosophie z. B. von Otto Neurath, Rudolf Haller, Friedrich Stadier und J.C. Nyiri verschiedene Erklärungen vorgeschlagen worden. In diesen spielen in jeweils unterschiedlicher Weise Faktoren der spezifisch österreichischen Entwicklungen in historischer, institutioneller, politischer und religiöser Hinsicht eine (...)
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  13. Die ganze Welt ist eine Bühne: Zur Ökologie und Ontologie menschlicher und tierischer Lebenswelt.Barry Smith - 2004 - Interdisziplinäre Phänomenologie / Interdisciplinary Phenomenology (Kyoto) 1:31-44.
    Die klassische bikategoriale Ontologie von Substanzen und Akzidentien ist für die Festlegung der Strukturen menschlichen und tierischen Verhaltens nicht hinreichend, da die Umwelten dieses Verhaltens sich nicht in dieses klassische System einfügen. Wir bieten dementsprechend den Grundriß einer Theorie der besonderen Gebilde, die die Alltagswelten menschlicher und tierischer Verhalten konstituieren. Die Ausgangsüberlegung ist die folgende, Wir sind alle (Schau)spieler, und diese brauchen eine Bühne. Unsere Bühne ist die jeweilige Umwelt, in der wir leben und handeln. Der Terminus ‘Umwelt’ wird hierbei (...)
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  14. Introduction.Christian Barry & Holly Lawford-Smith - 2012 - In Christian Barry & Holly Lawford-Smith (eds.), Global Justice. Ashgate.
    This volume brings together a range of influential essays by distinguished philosophers and political theorists on the issue of global justice. Global justice concerns the search for ethical norms that should govern interactions between people, states, corporations and other agents acting in the global arena, as well as the design of social institutions that link them together. The volume includes articles that engage with major theoretical questions such as the applicability of the ideals of social and economic equality to the (...)
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  15. The Ecological Approach to Information Processing.Barry Smith - 2003 - In Kristóf Nyíri (ed.), Mobile Learning: Essays on Philosophy, Psychology and Education. Passagen Verlag. pp. 17--24.
    Imagine a 5-stone weakling whose brain has been loaded with all the knowledge of a champion tennis player. He goes to serve in his first match – Wham! – His arm falls off. The 5-stone weakling just doesn’t have the bone structure or muscular development to serve that hard. There are, clearly, different types of knowledge/ability/skill, only some of which are a matter of what can be transferred simply by passing signals down a wire from one brain (or computer) to (...)
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  16. (1 other version)Publicity, externalism and inner states.Barry C. Smith - 2006 - In Tomáš Marvan (ed.), What determines content?: the internalism/externalism dispute. Newcastle, UK: Cambridge Scholars Press.
    The critic Cyril Connolly once pointed out that diarists don’t make novelists. He went on to describe the problem for the would-be writer. “Writing for oneself: no public. Writing for others: no privacy” (Cyril Connolly, Journal). This paper addresses Connolly's worry about the public ad private: how can we reconcile the inner and conscious dimension of speech with its outer and public dimension? For if what people mean by their words involves, or consists in, what they have in mind when (...)
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  17. Ontologische Relationen.Ulf Schwarz & Barry Smith - 2008 - In Ludger Jansen & Barry Smith (eds.), Biomedizinische Ontologie: Wissen strukturieren für den Informatik-Einsatz. Zürich: Vdf Hochschulverlag. pp. 155-172.
    In Kapitel 5 dieses Buches wurde mit dem ontologischen Sextett eine Klassifizierung der Realität vorgestellt, die das klassische Aristotelische Viereck erweitert, indem sie Einzeldinge und Universalien in insgesamt sechs Kategorien umfaßt. Zwischen den Entitäten dieser Kategorien sind bestimmte Beziehungen postuliert worden, wie zum Beispiel Inhärenz, Partizipation, Instantiierung, Exemplifizierung und Charakterisierung. In diesem Kapitel soil der Frage nachgegangen werden, wie eben diese Beziehungen zwischen den Entitäten dieser Kategorien genauer charakterisiert und die sie bezeichnenden relationalen Ausdrücke eindeutig formal definiert werden konnen.
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  18. Ontology of finance: an introduction.Gloria Sansò & Barry Smith - 2023 - Rivista di Estetica 84 (3):3-6.
    One famous scene in The Wolf of Wall Street (2013) is the dialogue between the young Jordan Belfort (Leonardo DiCaprio) and the expert trader Mark Hanna (Matthew McConaughey). Hanna is complaining that the stock market is unpredictable; it’s “fugazi … it’s fairy dust. It doesn’t exist. It’s never landed. It is not matter. It’s not on the element chart. It’s not real”. But the fact that something is unpredictable and non-physical does not imply that it does not exist. On the (...)
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  19. Model Theory, Hume's Dictum, and the Priority of Ethical Theory.Jack Woods & Barry Maguire - 2017 - Ergo: An Open Access Journal of Philosophy 4:419-440.
    It is regrettably common for theorists to attempt to characterize the Humean dictum that one can’t get an ‘ought’ from an ‘is’ just in broadly logical terms. We here address an important new class of such approaches which appeal to model-theoretic machinery. Our complaint about these recent attempts is that they interfere with substantive debates about the nature of the ethical. This problem, developed in detail for Daniel Singer’s and Gillian Russell and Greg Restall’s accounts of Hume’s dictum, is of (...)
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  20. (1 other version)Wanting what we don't want to want: Representing Addiction in Interoperable Bio-Ontologies.Janna Hastings, Nicolas Le Novère, Werner Ceusters, Kevin Mulligan & Barry Smith - 2012 - In Janna Hastings, Werner Ceusters, Mark Jensen, Kevin Mulligan & Barry Smith (eds.), Towards an Ontology of Mental Functioning (ICBO Workshop). CEUR. pp. 56-60.
    Ontologies are being developed throughout the biomedical sciences to address standardization, integration, classification and reasoning needs against the background of an increasingly data-driven research paradigm. In particular, ontologies facilitate the translation of basic research into benefits for the patient by making research results more discoverable and by facilitating knowledge transfer across disciplinary boundaries. Addressing and adequately treating mental illness is one of our most pressing public health challenges. Primary research across multiple disciplines such as psychology, psychiatry, biology, neuroscience and pharmacology (...)
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  21. (1 other version)Wahrmacher.Kevin Mulligan, Peter Simons & Barry Smith - 1987 - In L. Bruno Puntel (ed.), Der Wahrheitsbegriff. Neue Explikationsversuche. Wissenschaftliche Buchgesellschaft. pp. 210-255.
    Als zu Beginn des Jahrhunderts der Realismus wieder ernst genommen wurde, gab es viele Philosophen, die sich mit der Ontologie der Wahrheit befaßten. Unabhängig von der Bestimmung der Wahrheit als Korrespondenzbeziehung wollten sie herausfinden, inwieweit zur Erklärung der Wahrheit von Sätzen besondere Entitäten herangezogen werden müssen. Einige dieser Entitäten, so zum Beispiel Bolzanos ‘Sätze an sich’, Freges ‘Gedanken’ oder die ‘propositions’ von Russell und Moore, wurden als Träger der Eigenschaften Wahrheit und Falschheit aufgefaßt. Einige Philosophen jedoch, wie Russell, Wittgenstein im (...)
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  22. Holism, organicism and the risk of biochauvinism.Charles T. Wolfe - 2014 - Verifiche: Rivista Trimestrale di Scienze Umane 43 (1-3):39-57.
    In this essay I seek to critically evaluate some forms of holism and organicism in biological thought, as a more deflationary echo to Gilbert and Sarkar's reflection on the need for an 'umbrella' concept to convey the new vitality of holistic concepts in biology (Gilbert and Sarkar 2000). Given that some recent discussions in theoretical biology call for an organism concept (from Moreno and Mossio’s work on organization to Kirschner et al.’s research paper in Cell, 2000, building on chemistry to (...)
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  23.  78
    Deep Uncertainty and Incommensurability: General Cautions about Precaution.Rush T. Stewart - forthcoming - Philosophy of Science.
    The precautionary principle is invoked in a number of important personal and policy decision contexts. Peterson shows that certain ways of making the principle precise are inconsistent with other criteria of decision-making. Some object that the results do not apply to cases of deep uncertainty or value incommensurability which are alleged to be in the principle’s wheelhouse. First, I show that Peterson’s impossibility results can be generalized considerably to cover cases of both deep uncertainty and incommensurability. Second, I (...)
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  24. Annotating affective neuroscience data with the Emotion Ontology.Janna Hastings, Werner Ceusters, Kevin Mulligan & Barry Smith - 2012 - In Janna Hastings, Werner Ceusters, Kevin Mulligan & Barry Smith (eds.), Third International Conference on Biomedical Ontology. ICBO. pp. 1-5.
    The Emotion Ontology is an ontology covering all aspects of emotional and affective mental functioning. It is being developed following the principles of the OBO Foundry and Ontological Realism. This means that in compiling the ontology, we emphasize the importance of the nature of the entities in reality that the ontology is describing. One of the ways in which realism-based ontologies are being successfully used within biomedical science is in the annotation of scientific research results in publicly available databases. Such (...)
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  25. Biomedical Terminologies and Ontologies: Enabling Biomedical Semantic Interoperability and Standards in Europe.Bernard de Bono, Mathias Brochhausen, Sybo Dijkstra, Dipak Kalra, Stephan Keifer & Barry Smith - 2009 - In Bernard de Bono, Mathias Brochhausen, Sybo Dijkstra, Dipak Kalra, Stephan Keifer & Barry Smith (eds.), European Large-Scale Action on Electronic Health.
    In the management of biomedical data, vocabularies such as ontologies and terminologies (O/Ts) are used for (i) domain knowledge representation and (ii) interoperability. The knowledge representation role supports the automated reasoning on, and analysis of, data annotated with O/Ts. At an interoperability level, the use of a communal vocabulary standard for a particular domain is essential for large data repositories and information management systems to communicate consistently with one other. Consequently, the interoperability benefit of selecting a particular O/T as a (...)
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  26. Barry Smith an sich.Gerald J. Erion & Gloria Zúñiga Y. Postigo (eds.) - 2017 - Cosmos + Taxis.
    Festschrift in Honor of Barry Smith on the occasion of his 65th Birthday. Published as issue 4:4 of the journal Cosmos + Taxis: Studies in Emergent Order and Organization. Includes contributions by Wolfgang Grassl, Nicola Guarino, John T. Kearns, Rudolf Lüthe, Luc Schneider, Peter Simons, Wojciech Żełaniec, and Jan Woleński.
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  27. Truth-makers and Convention T.Jan Woleński - 2011 - Philosophical Papers Dedicated to Kevin Mulligan.
    This papers discuss the place, if any, of Convention T (the condition of material adequacy of the proper definition of truth formulated by Tarski) in the truth-makers account offered by Kevin Mulligan, Peter Simons and Barry Smith. It is argued that although Tarski’s requirement seems entirely acceptable in the frameworks of truth-makers theories for the first-sight, several doubts arise under a closer inspection. In particular, T-biconditionals have no clear meaning as sentences about truth-makers. Thus, truth-makers theory cannot be considered (...)
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  28. Why Machines Won't Rule the World. [REVIEW]Peter Gärdenfors - 2024 - Sans 2.
    This is a review of Jobst Landgrebe and Barry Smith, Why Machines Will Neve Rule the World (Routledge, 2023).
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  29. Reaching for my gun: why we shouldn't hear the word "culture" in normative political theory.Simon Cushing - 2007 - 1st Global Conference: Multiculturalism, Conflict and Belonging.
    Culture is a notoriously elusive concept. This fact has done nothing to hinder its popularity in contemporary analytic political philosophy among writers like John Rawls, Will Kymlicka, Michael Walzer, David Miller, Iris Marion Young, Joseph Raz, Avishai Margalit and Bikhu Parekh, among many others. However, this should stop, both for the metaphysical reason that the concept of culture, like that of race, is itself either incoherent or lacking a referent in reality, and for several normative reasons. I focus on the (...)
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  30. Virgin vs. Chad: On Enforced Monogamy as a Solution to the Incel Problem.Dan Demetriou - 2022 - In David Boonin (ed.), The Palgrave Handbook of Sexual Ethics. London: Palgrave Macmillan. pp. 155-175.
    Controversially, psychologist and public intellectual Jordan Peterson advises “enforced monogamy” for societies with high percentages of “incels.” As Peterson’s proposal resonates in manosphere circles, this chapter reconstructs and briefly evaluates the argument for it. Premised on the moral importance of civilizational sustainability, advocates argue that both polygamous and socially monogamous but sexually liberal mating patterns result in unsustainable proportions of unattached young men. Given the premises, monogamous societies are probably justified in maintaining their anti-polygamist social and legal norms. (...)
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  31. Skepticism, Invulnerability, and Epistemological Dissatisfaction.Chris Ranalli - 2013 - In C. Illies & C. Schaefer (eds.), Metaphysics or Modernity? Bamberg University Press. pp. 113-148.
    How should we understand the relationship between the contents of our color, causal, modal, and evaluative beliefs, on the one hand, and color, causal, modal, and evaluative properties, on the other? According to Barry Stroud (2011), because of the nature of the contents of those types of beliefs, we should also think that what he calls a “negative metaphysical verdict” on the latter is not one that we could consistently maintain. The metaphysical project aims to arrive at an improved (...)
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  32. What does it take to "have" a reason?Mark Schroeder - 2011 - In Andrew Evan Reisner & Asbjørn Steglich-Petersen (eds.), Reasons for Belief. New York: Cambridge University Press. pp. 201--22.
    forthcoming in reisner and steglich-peterson, eds., Reasons for Belief If I believe, for no good reason, that P and I infer (correctly) from this that Q, I don’t think we want to say that I ‘have’ P as evidence for Q. Only things that I believe (or could believe) rationally, or perhaps, with justification, count as part of the evidence that I have. It seems to me that this is a good reason to include an epistemic acceptability constraint on (...)
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  33. Oxford Handbook of Philosophy of Imagination and Creativity.Amy Kind & Julia Langkau (eds.) - forthcoming - Oxford University Press.
    Philosophy has long either dismissed or paid only minimal attention to creativity, and even with the rise of research on imagination, the creative imagination has largely been ignored as well. The aim of this volume is to correct this neglect. By bringing together existing research in various sub-disciplines, we also aim to open up new avenues of research. The chapters in Part I provide some framing and history on the philosophical study of imagination and creativity, along with an overview of (...)
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  34. Proprioception of Thinking and Emotional Intelligence are Central to Doing Philosophy with Children.Maria daVenza Tillmanns - 2019
    Philosophy with children often focuses on abstract reasoning skills, but as David Bohm points out the “entire process of mind” consists of our abstract thought as well as our “tacit, concrete process of thought.” Philosophy with children should address the “entire process of mind.” Our tacit, concrete process of thought refers to the process of thought that involves our actions such as the process of thought that goes into riding a bicycle. Bohm contends that we need to develop an awareness (...)
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  35. CORCORAN'S 27 ENTRIES IN THE 1999 SECOND EDITION.John Corcoran - 1995 - In Robert Audi (ed.), The Cambridge Dictionary of Philosophy. New York City: Cambridge University Press. pp. 65-941.
    Corcoran’s 27 entries in the 1999 second edition of Robert Audi’s Cambridge Dictionary of Philosophy [Cambridge: Cambridge UP]. -/- ancestral, axiomatic method, borderline case, categoricity, Church (Alonzo), conditional, convention T, converse (outer and inner), corresponding conditional, degenerate case, domain, De Morgan, ellipsis, laws of thought, limiting case, logical form, logical subject, material adequacy, mathematical analysis, omega, proof by recursion, recursive function theory, scheme, scope, Tarski (Alfred), tautology, universe of discourse. -/- The entire work is available online free at more than (...)
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  36. Los argumentos del lenguaje privado. Notas para la reconstrucción de una controversia.Pedro Karczmarczyk - 2012 - Fenomenologia. Diálogos Possíveis Campinas: Alínea/Goiânia: Editora da Puc Goiás 92:73-124.
    Intentaremos reconstruir la controversia acerca de la posibilidad de un lenguaje privado. Analizamos primero las posiciones “epistemológicas” (Malcolm y Fogelin), mostrando sus fallos. Luego analizamos la versión “semántica” (Kenny y Tugendhat) encontrándolas igualmente fallidas. La crítica de Barry Stroud a los argumentos trascendentales como argumentos antiescépticos nos permite discernir el presupuesto común que debilita las posiciones anteriores. Asimismo, la reconstrucción permite apreciar mejor la manera en la que la versión de Kripke evita comprometerse con este presupueto. Argumentamos que esta (...)
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  37. Gametogênese Animal: Espermatogênese e Ovogênese.Emanuel Isaque Cordeiro da Silva - manuscript
    GAMETOGÊNESE -/- Emanuel Isaque Cordeiro da Silva Instituto Agronômico de Pernambuco Departamento de Zootecnia – UFRPE Embrapa Semiárido -/- • _____OBJETIVO -/- Os estudantes bem informados, estão a buscando conhecimento a todo momento. O estudante de Veterinária e Zootecnia, sabe que a Reprodução é uma área de primordial importância para sua carreira. Logo, o conhecimento da mesma torna-se indispensável. No primeiro trabalho da série fisiologia reprodutiva dos animais domésticos, foi abordado de forma clara, didática e objetiva os mecanismos de diferenciação (...)
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  38. The Ontology for Biomedical Investigations.Anita Bandrowski, Ryan Brinkman, Mathias Brochhausen, Matthew H. Brush, Bill Bug, Marcus C. Chibucos, Kevin Clancy, Mélanie Courtot, Dirk Derom, Michel Dumontier, Liju Fan, Jennifer Fostel, Gilberto Fragoso, Frank Gibson, Alejandra Gonzalez-Beltran, Melissa A. Haendel, Yongqun He, Mervi Heiskanen, Tina Hernandez-Boussard, Mark Jensen, Yu Lin, Allyson L. Lister, Phillip Lord, James Malone, Elisabetta Manduchi, Monnie McGee, Norman Morrison, James A. Overton, Helen Parkinson, Bjoern Peters, Philippe Rocca-Serra, Alan Ruttenberg, Susanna-Assunta Sansone, Richard H. Scheuermann, Daniel Schober, Barry Smith, Larisa N. Soldatova, Christian J. Stoeckert, Chris F. Taylor, Carlo Torniai, Jessica A. Turner, Randi Vita, Patricia L. Whetzel & Jie Zheng - 2016 - PLoS ONE 11 (4):e0154556.
    The Ontology for Biomedical Investigations (OBI) is an ontology that provides terms with precisely defined meanings to describe all aspects of how investigations in the biological and medical domains are conducted. OBI re-uses ontologies that provide a representation of biomedical knowledge from the Open Biological and Biomedical Ontologies (OBO) project and adds the ability to describe how this knowledge was derived. We here describe the state of OBI and several applications that are using it, such as adding semantic expressivity to (...)
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  39. Ontologies as Integrative Tools for Plant Science.Ramona Walls, Balaji Athreya, Laurel Cooper, Justin Elser, Maria A. Gandolfo, Pankaj Jaiswal, Christopher J. Mungall, Justin Preece, Stefan Rensing, Barry Smith & Dennis W. Stevenson - 2012 - American Journal of Botany 99 (8):1263–1275.
    Bio-ontologies are essential tools for accessing and analyzing the rapidly growing pool of plant genomic and phenomic data. Ontologies provide structured vocabularies to support consistent aggregation of data and a semantic framework for automated analyses and reasoning. They are a key component of the Semantic Web. This paper provides background on what bio-ontologies are, why they are relevant to botany, and the principles of ontology development. It includes an overview of ontologies and related resources that are relevant to plant science, (...)
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  40. Functions in Basic Formal Ontology.Andrew D. Spear, Werner Ceusters & Barry Smith - 2016 - Applied ontology 11 (2):103-128.
    The notion of function is indispensable to our understanding of distinctions such as that between being broken and being in working order (for artifacts) and between being diseased and being healthy (for organisms). A clear account of the ontology of functions and functioning is thus an important desideratum for any top-level ontology intended for application to domains such as engineering or medicine. The benefit of using top-level ontologies in applied ontology can only be realized when each of the categories identified (...)
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  41. fMRI reveals reciprocal inhibition between social and physical cognitive domains.Anthony I. Jack, Abigail Dawson, Katelyn Begany, Regina Leckie, Kevin Barry, Angela Ciccia & Abraham Snyder - 2013 - NeuroImage 66:385-401.
    Two lines of evidence indicate that there exists a reciprocal inhibitory relationship between opposed brain networks. First, most attention-demanding cognitive tasks activate a stereotypical set of brain areas, known as the task-positive network and simultaneously deactivate a different set of brain regions, commonly referred to as the task negative or defaultmode network. Second, functional connectivity analyses show that these same opposed networks are anti-correlated in the resting state. Wehypothesize that these reciprocally inhibitory effects reflect two incompatible cognitive modes, each of (...)
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  42. Referent Tracking: The Problem of Negative Findings.Werner Ceusters, Peter Elkin & Barry Smith - 2006 - Studies in Health Technology and Informatics 124:741-46.
    The paradigm of referent tracking is based on a realist presupposition which rejects so-called negative entities (congenital absent nipple, and the like) as spurious. How, then, can a referent tracking-based Electronic Health Record deal with what are standardly called ‘negative findings’? To answer this question we carried out an analysis of some 748 sentences drawn from patient charts and containing some form of negation. Our analysis shows that to deal with these sentences we need to introduce a new ontological relationship (...)
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  43. The Space Object Ontology.Alexander P. Cox, Christopher Nebelecky, Ronald Rudnicki, William Tagliaferri, John L. Crassidis & Barry Smith - 2016 - In Alexander P. Cox, Christopher Nebelecky, Ronald Rudnicki, William Tagliaferri, John L. Crassidis & Barry Smith (eds.), 19th International Conference on Information Fusion (FUSION 2016). IEEE.
    Achieving space domain awareness requires the identification, characterization, and tracking of space objects. Storing and leveraging associated space object data for purposes such as hostile threat assessment, object identification, and collision prediction and avoidance present further challenges. Space objects are characterized according to a variety of parameters including their identifiers, design specifications, components, subsystems, capabilities, vulnerabilities, origins, missions, orbital elements, patterns of life, processes, operational statuses, and associated persons, organizations, or nations. The Space Object Ontology provides a consensus-based realist framework (...)
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  44. Foundation for a Natural Right to Health Care.Jason T. Eberl, Eleanor K. Kinney & Matthew J. Williams - 2011 - Journal of Medicine and Philosophy 36 (6):537-557.
    Discussions concerning whether there is a natural right to health care may occur in various forms, resulting in policy recommendations for how to implement any such right in a given society. But health care policies may be judged by international standards including the UN Universal Declaration of Human Rights. The rights enumerated in the UDHR are grounded in traditions of moral theory, a philosophical analysis of which is necessary in order to adjudicate the value of specific policies designed to enshrine (...)
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  45. Justice and the Initial Acquisition of Property.John T. Sanders - 1987 - Harvard Journal of Law and Public Policy 10 (2):367-99.
    There is a great deal that might be said about justice in property claims. The strategy that I shall employ focuses attention upon the initial acquisition of property -- the most sensitive and most interesting area of property theory. Every theory that discusses property claims favorably assumes that there is some justification for transforming previously unowned resources into property. It is often this assumption which has seemed, to one extent or another, to be vulnerable to attack by critics of particular (...)
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  46. An Ontology of Affordances.John T. Sanders - 1997 - Ecological Psychology 9 (1):97-112.
    I argue that the most promising approach to understanding J.J. Gibson's "affordances" takes affordances themselves as ontological primitives, instead of treating them as dispositional properties of more primitive things, events, surfaces, or substances. These latter are best treated as coalescences of affordances present in the environment (or "coalescences of use-potential," as in Sanders (1994) and Hilditch (1995)). On this view, even the ecological approach's stress on the complementary organism/environment pair is seen as expressing a particular affordance relation between the world (...)
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  47. Life After Death and the Devastation of the Grave.Eric T. Olson - 2015 - In Keith Augustine & Michael Martin (eds.), The Myth of an Afterlife: The Case against Life After Death. Lanham, MD: Rowman & Littlefield. pp. 409-423.
    This paper—written for nonspecialist readers—asks whether life after death is in any sense possible given the apparent fact that after we die our remains decay to the point where only randomly scattered atoms remain. The paper argues that this is possible only if our remains are not in fact dispersed in this way, and discusses how that might be the case. -/- 1. Life After Death -- 2. Total Destruction -- 3. The Soul -- 4. Body-Snatching -- 5. Radical Resurrection (...)
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  48. Formal Ontology for Natural Language Processing and the Integration of Biomedical Databases.Jonathan Simon, James M. Fielding, Mariana C. Dos Santos & Barry Smith - 2005 - International Journal of Medical Informatics 75 (3-4):224-231.
    The central hypothesis of the collaboration between Language and Computing (L&C) and the Institute for Formal Ontology and Medical Information Science (IFOMIS) is that the methodology and conceptual rigor of a philosophically inspired formal ontology greatly benefits application ontologies. To this end r®, L&C’s ontology, which is designed to integrate and reason across various external databases simultaneously, has been submitted to the conceptual demands of IFOMIS’s Basic Formal Ontology (BFO). With this project we aim to move beyond the level of (...)
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  49. Ontological Commitments, Thick and Thin.Harold T. Hodes - 1990 - In George Boolos (ed.), Method, Reason and Language: Essays in Honor of Hilary Putnam. Cambridge University Press. pp. 235-260.
    Discourse carries thin commitment to objects of a certain sort iff it says or implies that there are such objects. It carries a thick commitment to such objects iff an account of what determines truth-values for its sentences say or implies that there are such objects. This paper presents two model-theoretic semantics for mathematical discourse, one reflecting thick commitment to mathematical objects, the other reflecting only a thin commitment to them. According to the latter view, for example, the semantic role (...)
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  50. Publications by Barry Smith.Barry Smith - 2017 - Cosmos + Taxis 4 (4):67-104.
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