Results for 'Mark Musen'

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  1. Towards Interoperability of Biomedical Ontologies.Musen Mark, A. Schroeder, Michael Smith & Barry - 2008 - Schloss Dagstuhl: Leibniz-Zentrum für Informatik.
    Report on Dagstuhl Seminar 07132, Schloss Dagstuhl, March 27-30 , 2007.
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  2. The National Center for Biomedical Ontology.Mark A. Musen, Natalya F. Noy, Nigam H. Shah, Patricia L. Whetzel, Christopher G. Chute, Margaret-Anne Story & Barry Smith - 2012 - Journal of the American Medical Informatics Association 19 (2):190-195.
    The National Center for Biomedical Ontology is now in its seventh year. The goals of this National Center for Biomedical Computing are to: create and maintain a repository of biomedical ontologies and terminologies; build tools and web services to enable the use of ontologies and terminologies in clinical and translational research; educate their trainees and the scientific community broadly about biomedical ontology and ontology-based technology and best practices; and collaborate with a variety of groups who develop and use ontologies and (...)
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  3. Towards Interoperability of Biomedical Ontologies - Report Number 07132.Mark Musen, Michael Schroeder & Barry Smith - 2008 - In Musen Mark, A. Schroeder, Michael Smith & Barry (eds.), Towards Interoperability of Biomedical Ontologies. Schloss Dagstuhl: Leibniz-Zentrum für Informatik.
    The meeting focused on uses of ontologies, with a special focus on spatial ontologies, in addressing the ever increasing needs faced by biology and medicine to cope with ever expanding quantities of data. To provide effective solutions computers need to integrate data deriving from myriad heterogeneous sources by bringing the data together within a single framework. The meeting brought together leaders in the field of what are called "top-level ontologies" to address this issue, and to establish strategies among leaders in (...)
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  4. Applied ontology: Focusing on content.Nicola Guarino & Mark A. Musen - 2005 - Applied ontology 1 (1):1-5.
    In a world that is overflowing with journals and other outlets for scientific publication, the appearance of any new periodical requires some justification. There are already more journals than we can read and more conferences than we can attend. In the case of applied Ontology, we believe that the creation of anew journal not only is completely justifiable, it is downright exciting. For too long, workers in computer science have assumed that content comes for free. “Theory” in computer science has (...)
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  5. Ten years of Applied Ontology.Nicola Guarino & Mark A. Musen - 2015 - Applied ontology 10 (3-4):169-170.
    This is a short editorial to introduce the double issue of Applied Ontology that celebrates the journal's tenth anniversary. At a time when information technology of all kinds depends on the use of explicit ontologies, our journal addresses the modeling issues that underlie the next generation of computational systems. As the editors of Applied Ontology, we are excited by how far we have come in the past decade and by the opportunities that await our research community.
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  6. Ontology Summit 2008 Communiqué: Towards an open ontology repository.Leo Obrst, Mark Musen, Barry Smith, Fabian Neuhaus, Frank Olken, Mike Gruninger, M. Raymond, Patrick Hayes & Raj Sharma - 2008 - In Leo Obrst, Mark Musen, Barry Smith, Fabian Neuhaus, Frank Olken, Mike Gruninger, M. Raymond, Patrick Hayes & Raj Sharma (eds.), Ontology Summit 2008 Communiqué: Towards an open ontology repository. cim3. net.
    Each annual Ontology Summit initiative makes a statement appropriate to each Summit’s theme as part of our general advocacy designed to bring ontology science and engineering into the mainstream. The theme this year is "Towards an Open Ontology Repository". This communiqué represents the joint position of those who were engaged in the year's summit discourse on an Open Ontology Repository (OOR) and of those who endorse below. In this discussion, we have agreed that an "ontology repository is a facility where (...)
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  7. ARGOS policy brief on semantic interoperability.Dipak Kalra, Mark Musen, Barry Smith & Werner Ceusters - 2011 - Studies in Health Technology and Informatics 170 (1):1-15.
    Semantic interoperability requires the use of standards, not only for Electronic Health Record (EHR) data to be transferred and structurally mapped into a receiving repository, but also for the clinical content of the EHR to be interpreted in conformity with the original meanings intended by its authors. Accurate and complete clinical documentation, faithful to the patient’s situation, and interoperability between systems, require widespread and dependable access to published and maintained collections of coherent and quality-assured semantic resources, including models such as (...)
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  8. Bioportal: Ontologies and integrated data resources at the click of the mouse.L. Whetzel Patricia, H. Shah Nigam, F. Noy Natalya, Dai Benjamin, Dorf Michael, Griffith Nicholas, Jonquet Clement, Youn Cherie, Callendar Chris, Coulet Adrien, Barry Smith, Chris Chute & Mark Musen - 2011 - In Whetzel Patricia L., Shah Nigam H., Noy Natalya F., Benjamin Dai, Michael Dorf, Nicholas Griffith, Clement Jonquet, Cherie Youn, Chris Callendar, Adrien Coulet, Smith Barry, Chute Chris & Musen Mark (eds.), Proceedings of the 2nd International Conference on Biomedical Ontology, Buffalo, NY. pp. 292-293.
    BioPortal is a Web portal that provides access to a library of biomedical ontologies and terminologies developed in OWL, RDF(S), OBO format, Protégé frames, and Rich Release Format. BioPortal functionality, driven by a service-oriented architecture, includes the ability to browse, search and visualize ontologies (Figure 1). The Web interface also facilitates community-based participation in the evaluation and evolution of ontology content.
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  9. The Selected Writings of Mark Pettinelli.Mark Pettinelli - manuscript
    The best writing of Mark Pettinelli, about cognitive psychology, cognitive science, etc.
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  10. The Philosophical Work of Mark Sharlow: an Introduction and Guide.Mark F. Sharlow - manuscript
    Provides an overview of Mark Sharlow's philosophical work with summaries of his positions. Includes references and links to his writings.
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  11. Moral imagination: implications of cognitive science for ethics.Mark Johnson - 1993 - Chicago: University of Chicago Press.
    Using path-breaking discoveries of cognitive science, Mark Johnson argues that humans are fundamentally imaginative moral animals, challenging the view that morality is simply a system of universal laws dictated by reason. According to the Western moral tradition, we make ethical decisions by applying universal laws to concrete situations. But Johnson shows how research in cognitive science undermines this view and reveals that imagination has an essential role in ethical deliberation. Expanding his innovative studies of human reason in Metaphors We (...)
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  12. The Unfinishable Scroll and Beyond: Mark Sharlow's Blogs, July 2008 to March 2011.Mark F. Sharlow - manuscript
    An archive of Mark Sharlow's two blogs, "The Unfinishable Scroll" and "Religion: the Next Version." Covers Sharlow's views on metaphysics, epistemology, mind, science, religion, and politics. Includes topics and ideas not found in his papers.
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  13. Research Notes of Mark Pettinelli.Mark Pettinelli - manuscript
    Research notes of Mark Pettinelli about cognitive science, cognitive psychology.
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  14. Getting Perspective on Objective Reasons.Mark Schroeder - 2018 - Ethics 128 (2):289-319.
    This article considers two important problems for the idea that what we ought to do is determined by the balance of competing reasons. The problems are distinct, but the object of the article is to explore how they admit of a single solution. It is a consequence of this solution that objective reasons—facts that count in favor—are in an important sense less objective than they have consistently been assumed to be. This raises but does not answer the question as to (...)
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  15. The Collected Works of Mark Rozen Pettinelli [2006-2015].Mark Pettinelli - manuscript
    This collection of articles is almost all of the psychological writings of Mark Pettinelli.
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  16. The cost of truthmaker maximalism.Mark Jago - 2013 - Canadian Journal of Philosophy 43 (4):460-474.
    According to truthmaker theory, particular truths are true in virtue of the existence of particular entities. Truthmaker maximalism holds that this is so for all truths. Negative existential and other ‘negative’ truths threaten the position. Despite this, maximalism is an appealing thesis for truthmaker theorists. This motivates interest in parsimonious maximalist theories, which do not posit extra entities for truthmaker duty. Such theories have been offered by David Lewis and Gideon Rosen, Ross Cameron, and Jonathan Schaffer. But these theories cannot (...)
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  17. Modality and constitution in distinctively mathematical explanations.Mark Povich - 2020 - European Journal for Philosophy of Science 10 (3):1-10.
    Lange argues that some natural phenomena can be explained by appeal to mathematical, rather than natural, facts. In these “distinctively mathematical” explanations, the core explanatory facts are either modally stronger than facts about ordinary causal law or understood to be constitutive of the physical task or arrangement at issue. Craver and Povich argue that Lange’s account of DME fails to exclude certain “reversals”. Lange has replied that his account can avoid these directionality charges. Specifically, Lange argues that in legitimate DMEs, (...)
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  18. Mental Notes of Mark Pettinelli.Mark Pettinelli - manuscript
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  19. When Beliefs Wrong.Mark Schroeder - 2018 - Philosophical Topics 46 (1):115-127.
    Most philosophers find it puzzling how beliefs could wrong, and this leads them to conclude that they do not. So there is much philosophical work to be done in sorting out whether I am right to say that they do, as well as how this could be so. But in this paper I will take for granted that beliefs can wrong, and ask instead when beliefs wrong. My answer will be that beliefs wrong when they falsely diminish. This answer has (...)
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  20. Identifying Virtues and Values Through Obituary Data-Mining.Mark Alfano, Andrew Higgins & Jacob Levernier - 2018 - Journal of Value Inquiry 52 (1).
    Because obituaries are succinct and explicitly intended to summarize their subjects’ lives, they may be expected to include only the features that the author finds most salient but also to signal to others in the community the socially-recognized aspects of the deceased’s character. We begin by reviewing studies 1 and 2, in which obituaries were carefully read and labeled. We then report study 3, which further develops these results with a semi-automated, large-scale semantic analysis of several thousand obituaries. Geography, gender, (...)
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  21. Privacy and Punishment.Mark Tunick - 2013 - Social Theory and Practice 39 (4):643-668.
    Philosophers have focused on why privacy is of value to innocent people with nothing to hide. I argue that for people who do have something to hide, such as a past crime, or bad behavior in a public place, informational privacy can be important for avoiding undeserved or disproportionate non-legal punishment. Against the objection that one cannot expect privacy in public facts, I argue that I might have a legitimate privacy interest in public facts that are not readily accessible, or (...)
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  22. Mechanisms and Model-Based Functional Magnetic Resonance Imaging.Mark Povich - 2015 - Philosophy of Science 82 (5):1035-1046.
    Mechanistic explanations satisfy widely held norms of explanation: the ability to manipulate and answer counterfactual questions about the explanandum phenomenon. A currently debated issue is whether any nonmechanistic explanations can satisfy these explanatory norms. Weiskopf argues that the models of object recognition and categorization, JIM, SUSTAIN, and ALCOVE, are not mechanistic yet satisfy these norms of explanation. In this article I argue that these models are mechanism sketches. My argument applies recent research using model-based functional magnetic resonance imaging, a novel (...)
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  23. Having reasons.Mark Schroeder - 2008 - Philosophical Studies 139 (1):57 - 71.
    What is it to have a reason? According to one common idea, the "Factoring Account", you have a reason to do A when there is a reason for you to do A which you have--which is somehow in your possession or grasp. In this paper, I argue that this common idea is false. But though my arguments are based on the practical case, the implications of this are likely to be greatest in epistemology: for the pitfalls we fall into when (...)
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  24. The Narrow Ontic Counterfactual Account of Distinctively Mathematical Explanation.Mark Povich - 2021 - British Journal for the Philosophy of Science 72 (2):511-543.
    An account of distinctively mathematical explanation (DME) should satisfy three desiderata: it should account for the modal import of some DMEs; it should distinguish uses of mathematics in explanation that are distinctively mathematical from those that are not (Baron [2016]); and it should also account for the directionality of DMEs (Craver and Povich [2017]). Baron’s (forthcoming) deductive-mathematical account, because it is modelled on the deductive-nomological account, is unlikely to satisfy these desiderata. I provide a counterfactual account of DME, the Narrow (...)
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  25. (1 other version)Knowledge Is Belief For Sufficient (Objective and Subjective) Reason.Mark Schroeder - 2015 - Oxford Studies in Epistemology 5.
    This chapter lays out a case that with the proper perspective on the place of epistemology within normative inquiry more generally, it is possible to appreciate what was on the right track about some of the early approaches to the analysis of knowledge, and to improve on the obvious failures which led them to be rejected. Drawing on more general principles about reasons, their weight, and their relationship to justification, it offers answers to problems about defeat and the conditional fallacy (...)
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  26. (1 other version)Technologically scaffolded atypical cognition: The case of YouTube’s recommender system.Mark Alfano, Amir Ebrahimi Fard, J. Adam Carter, Peter Clutton & Colin Klein - 2020 - Synthese (1-2):1-24.
    YouTube has been implicated in the transformation of users into extremists and conspiracy theorists. The alleged mechanism for this radicalizing process is YouTube’s recommender system, which is optimized to amplify and promote clips that users are likely to watch through to the end. YouTube optimizes for watch-through for economic reasons: people who watch a video through to the end are likely to then watch the next recommended video as well, which means that more advertisements can be served to them. This (...)
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  27. The Costs of HARKing.Mark Rubin - 2022 - British Journal for the Philosophy of Science 73 (2):535-560.
    Kerr coined the term ‘HARKing’ to refer to the practice of ‘hypothesizing after the results are known’. This questionable research practice has received increased attention in recent years because it is thought to have contributed to low replication rates in science. The present article discusses the concept of HARKing from a philosophical standpoint and then undertakes a critical review of Kerr’s twelve potential costs of HARKing. It is argued that these potential costs are either misconceived, misattributed to HARKing, lacking evidence, (...)
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  28. Means-end coherence, stringency, and subjective reasons.Mark Schroeder - 2009 - Philosophical Studies 143 (2):223 - 248.
    Intentions matter. They have some kind of normative impact on our agency. Something goes wrong when an agent intends some end and fails to carry out the means she believes to be necessary for it, and something goes right when, intending the end, she adopts the means she thinks are required. This has even been claimed to be one of the only uncontroversial truths in ethical theory. But not only is there widespread disagreement about why this is so, there is (...)
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  29. Instrumental mythology.Mark Schroeder - 2005 - Journal of Ethics and Social Philosophy 1 (2):1-13.
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  30. Is Knowledge Normative?Mark Schroeder - 2015 - Philosophical Issues 25 (1):379-395.
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  31. Doxastic Voluntarism.Mark Boespflug & Elizabeth Jackson - forthcoming - Stanford Encyclopedia of Philosophy.
    Doxastic voluntarism is the thesis that our beliefs are subject to voluntary control. While there’s some controversy as to what “voluntary control” amounts to (see 1.2), it’s often understood as direct control: the ability to bring about a state of affairs “just like that,” without having to do anything else. Most of us have direct control over, for instance, bringing to mind an image of a pine tree. Can one, in like fashion, voluntarily bring it about that one believes a (...)
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  32. (1 other version)Value and the right kind of reason.Mark Schroeder - 2010 - Oxford Studies in Metaethics 5:25-55.
    Fitting Attitudes accounts of value analogize or equate being good with being desirable, on the premise that ‘desirable’ means not, ‘able to be desired’, as Mill has been accused of mistakenly assuming, but ‘ought to be desired’, or something similar. The appeal of this idea is visible in the critical reaction to Mill, which generally goes along with his equation of ‘good’ with ‘desirable’ and only balks at the second step, and it crosses broad boundaries in terms of philosophers’ other (...)
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  33. Truthmaker Semantics for Relevant Logic.Mark Jago - 2020 - Journal of Philosophical Logic 49 (4):681-702.
    I develop and defend a truthmaker semantics for the relevant logic R. The approach begins with a simple philosophical idea and develops it in various directions, so as to build a technically adequate relevant semantics. The central philosophical idea is that truths are true in virtue of specific states. Developing the idea formally results in a semantics on which truthmakers are relevant to what they make true. A very natural notion of conditionality is added, giving us relevant implication. I then (...)
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  34. A plague on both your houses: Virtue theory after situationism and repligate.Mark Alfano - forthcoming - Teoria.
    Virtues are dispositions that make their bearers admirable. Dispositions can be studied scientifically by systematically varying whether their alleged bearers are in (or take themselves to be in) the dispositions' eliciting conditions. In recent decades, empirically-minded philosophers looked to social and personality psychology to study the extent to which ordinary humans embody dispositions traditionally considered admirable in the Aristotelian tradition. This led some to conclude that virtues are not attainable ideals, and that we should focus our ethical reflection and efforts (...)
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  35. Stakes, withholding, and pragmatic encroachment on knowledge.Mark Schroeder - 2012 - Philosophical Studies 160 (2):265 - 285.
    Several authors have recently endorsed the thesis that there is what has been called pragmatic encroachment on knowledge—in other words, that two people who are in the same situation with respect to truth-related factors may differ in whether they know something, due to a difference in their practical circumstances. This paper aims not to defend this thesis, but to explore how it could be true. What I aim to do, is to show how practical factors could play a role in (...)
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  36. The fundamental reason for reasons fundamentalism.Mark Schroeder - 2021 - Philosophical Studies 178 (10):3107-3127.
    Reasons, it is often said, are king in contemporary normative theory. Some philosophers say not only that the vocabulary of reasons is useful, but that reasons play a fundamental explanatory role in normative theory—that many, most, or even all, other normative facts are grounded in facts about reasons. Even if reasons fundamentalism, the strongest version of this view, has only been wholeheartedly endorsed by a few philosophers, it has a kind of prominence in contemporary normative theory that suits it to (...)
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  37. Form Without Matter: Empedocles and Aristotle on Color Perception.Mark Eli Kalderon - 2015 - Oxford: Oxford University Press.
    Mark Eli Kalderon presents an original study of perception, taking as its starting point a puzzle in Empedocles' theory of vision: if perception is a mode of material assimilation, how can we perceive colors at a distance? Kalderon argues that the theory of perception offered by Aristotle in answer to the puzzle is both attractive and defensible.
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  38. The Ubiquity of State-Given Reasons.Mark Schroeder - 2012 - Ethics 122 (3):457-488.
    Philosophers have come to distinguish between ‘right’ and ‘wrong’ kinds of reasons for belief, intention, and other attitudes. Several theories about the nature of this distinction have been offered, by far the most prevalent of which is the idea that it is, at bottom, the distinction between what are known as ‘object-given’ and ‘state-given’ reasons. This paper argues that the object-given/state-given theory vastly overgeneralizes on a small set of data points, and in particular that any adequate account of the distinction (...)
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  39. The scope of instrumental reason.Mark Schroeder - 2004 - Philosophical Perspectives 18 (1):337–364.
    Allow me to rehearse a familiar scenario. We all know that which ends you have has something to do with what you ought to do. If Ronnie is keen on dancing but Bradley can’t stand it, then the fact that there will be dancing at the party tonight affects what Ronnie and Bradley ought to do in different ways. In short, (HI) you ought, if you have the end, to take the means. But now trouble looms: what if you have (...)
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  40. Left Libertarianism for the Twenty-First Century.Mark R. Reiff - 2023 - Journal of Social and Political Philosophy 2 (2):191-211.
    There are many different kinds of libertarianism. The first is right libertarianism, which received its most powerful expression in Robert Nozick’s Anarchy, State and Utopia (1974), a book that still sets the baseline for discussions of libertarianism today. The second, I will call faux libertarianism. For reasons I will explain in this paper, most ‘man-on-the-street’ libertarians and most politicians who claim to be libertarians are actually this kind of libertarian. And third, there is left libertarianism, which is what I shall (...)
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  41. Tolerant Imperialism: J.S. Mill's Defense of British Rule in India.Mark Tunick - 2006 - Review of Politics 68 (4):586-611.
    Some critics of Mill understand him to advocate the forced assimilation of people he regards as uncivilized, and to defend toleration and the principle of liberty only for civilized people of the West. Examination of Mill’s social and political writings and practice while serving the British East India Company shows, instead, that Mill is a ‘tolerant imperialist’: Mill defends interference in India to promote the protection of legal rights, respect and toleration for conflicting viewpoints, and a commercial society that can (...)
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  42. My Final Analysis of Everything - including Emotions, Feelings and Thoughts - By Mark Rozen Pettinelli.Mark Pettinelli - 2020
    This article is one of the final works of Mark Pettinelli and discusses feelings, emotions and cognitive psychology.
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  43.  88
    Chapter 5 Skeptical-Dogmatism and the Self-Undermining Objection.Mark Walker - 2024 - In Outlines of skeptical-dogmatism: on disbelieving our philosophical views. Lanham: Lexington Books.
    This chapter puts to rest for all of eternity the self-undermining charge against conciliationism.
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  44. Treating like a child.Mark Schroeder - 2020 - Analytic Philosophy 63 (2):73-89.
    Analytic Philosophy, Volume 63, Issue 2, Page 73-89, June 2022.
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  45. Being Positive About Negative Facts.Mark Jago & Stephen Barker - 2012 - Philosophy and Phenomenological Research 85 (1):117-138.
    Negative facts get a bad press. One reason for this is that it is not clear what negative facts are. We provide a theory of negative facts on which they are no stranger than positive atomic facts. We show that none of the usual arguments hold water against this account. Negative facts exist in the usual sense of existence and conform to an acceptable Eleatic principle. Furthermore, there are good reasons to want them around, including their roles in causation, chance-making (...)
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  46. Sympathy in Perception.Mark Eli Kalderon - 2017 - Cambridge: Cambridge University Press.
    This is a book about the metaphysics of perception and discusses touch, audition, and vision. Though primarily concerned with the nature of perception, it draws heavily from the history of philosophy of perception, and connects the concerns of analytical and continental philosophers.
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  47. There is no aesthetic experience of the genuine.Mark Windsor - 2023 - Analysis 83 (2):305-312.
    Many hold that aesthetic appreciation is sensitive to the authenticity or genuineness of an object. In a recent body of work, Carolyn Korsmeyer has defended the claim that genuineness itself is an aesthetic property. Korsmeyer’s aim is to explain our aesthetic appreciation of objects that afford a sense of being ‘in touch with the past’. In this paper, I argue that genuineness cannot explain our appreciation of these objects. There is no aesthetic experience of the genuine.
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  48. The Prince and the Phone Booth: Reporting Puzzling Beliefs.Mark Crimmins & John Perry - 1989 - Journal of Philosophy 86 (12):685.
    Beliefs are concrete particulars containing ideas of properties and notions of things, which also are concrete. The claim made in a belief report is that the agent has a belief (i) whose content is a specific singular proposition, and (ii) which involves certain of the agent's notions and ideas in a certain way. No words in the report stand for the notions and ideas, so they are unarticulated constituents of the report's content (like the relevant place in "it's raining"). The (...)
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  49. Rational stability under pragmatic encroachment.Mark Schroeder - 2018 - Episteme 15 (3):297-312.
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  50. Technological Seduction and Self-Radicalization.Mark Alfano, Joseph Adam Carter & Marc Cheong - 2018 - Journal of the American Philosophical Association (3):298-322.
    Many scholars agree that the Internet plays a pivotal role in self-radicalization, which can lead to behaviours ranging from lone-wolf terrorism to participation in white nationalist rallies to mundane bigotry and voting for extremist candidates. However, the mechanisms by which the Internet facilitates self-radicalization are disputed; some fault the individuals who end up self-radicalized, while others lay the blame on the technology itself. In this paper, we explore the role played by technological design decisions in online self-radicalization in its myriad (...)
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